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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Podoviridae
Anticodon = CTG
HIT:
5 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.793256 (6 seq.)
>PHG181006834
MG518520
Podoviridae
Streptomyces phage Immanuel3 (MG518520)
16417
16488
+
Gln
CTG
[ENA]
¡û
>PHG181007064
MG663582
Podoviridae
Streptomyces phage HaugeAnator (MG663582)
16413
16484
+
Gln
CTG
[ENA]
¡û
>PHG181007078
MG663583
Podoviridae
Streptomyces phage Percastrophe (MG663583)
16407
16478
+
Gln
CTG
[ENA]
¡û
>PHG181007092
MG663584
Podoviridae
Streptomyces phage Romero (MG663584)
16406
16477
+
Gln
CTG
[ENA]
¡û
>PHG181007106
MG663585
Podoviridae
Streptomyces phage ToriToki (MG663585)
16406
16477
+
Gln
CTG
[ENA]
¡û
>PHG181007120
MG663586
Podoviridae
Streptomyces phage ZooBear (MG663586)
16413
16484
+
Gln
CTG
[ENA]
¡û
Identical group No.808952 (1 seq.)
>PHG182000076
MH155868
Podoviridae
Streptomyces phage FlowerPower (MH155868)
16383
16454
+
Gln
CTG
[ENA]
¡û
Identical group No.818051 (1 seq.)
>PHG181000055
AP017903
Podoviridae
Azobacteroides phage ProJPt-Bp1 (AP017903)
4238
4167
-
Gln
CTG
[ENA]
¡û
Identical group No.825937 (1 seq.)
>PHG182000064
MG515223
Podoviridae
Streptomyces phage WRightOn (MG515223)
16724
16795
+
Gln
CTG
[ENA]
¡û
Identical group No.825938 (1 seq.)
>PHG182000065
MG518519
Podoviridae
Streptomyces phage Manuel (MG518519)
16758
16829
+
Gln
CTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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