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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Podoviridae
Anticodon = CTT
HIT:
5 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.370725 (1 seq.)
>PHG181007830
MH155868
Podoviridae
Streptomyces phage FlowerPower (MH155868)
17101
17175
+
Lys
CTT
[ENA]
¡û
Identical group No.379891 (1 seq.)
>PHG181007085
MG663583
Podoviridae
Streptomyces phage Percastrophe (MG663583)
17395
17469
+
Lys
CTT
[ENA]
¡û
Identical group No.421682 (1 seq.)
>PHG181006813
MG515223
Podoviridae
Streptomyces phage WRightOn (MG515223)
17966
18040
+
Lys
CTT
[ENA]
¡û
Identical group No.421685 (1 seq.)
>PHG181006827
MG518519
Podoviridae
Streptomyces phage Manuel (MG518519)
17775
17849
+
Lys
CTT
[ENA]
¡û
Identical group No.504467 (5 seq.)
>PHG181006841
MG518520
Podoviridae
Streptomyces phage Immanuel3 (MG518520)
17467
17540
+
Lys
CTT
[ENA]
¡û
>PHG181007071
MG663582
Podoviridae
Streptomyces phage HaugeAnator (MG663582)
17463
17536
+
Lys
CTT
[ENA]
¡û
>PHG181007099
MG663584
Podoviridae
Streptomyces phage Romero (MG663584)
17456
17529
+
Lys
CTT
[ENA]
¡û
>PHG181007113
MG663585
Podoviridae
Streptomyces phage ToriToki (MG663585)
17456
17529
+
Lys
CTT
[ENA]
¡û
>PHG181007127
MG663586
Podoviridae
Streptomyces phage ZooBear (MG663586)
17463
17536
+
Lys
CTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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