This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Podoviridae
Anticodon = GAA
HIT:
5 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.585161 (2 seq.)
>PHG14102307
KC821612
Podoviridae
Cellulophaga phage phi40:1 (KC821612)
37437
37510
+
Phe
GAA
[ENA]
¡û
>PHG14102320
KC821614
Podoviridae
Cellulophaga phage phi38:1 (KC821614)
37440
37513
+
Phe
GAA
[ENA]
¡û
Identical group No.682174 (4 seq.)
>WENV170005132
AKYZ01002381
[AKYZ] insect gut metagenome;
584
658
+
Phe
GAA
[ENA]
¢þ
>WENV170005161
AKZA01001883
[AKZA] insect gut metagenome;
38305
38379
+
Phe
GAA
[ENA]
¢þ
>PHG181007399
MG873442
Podoviridae
Salmonella phage SE131 (MG873442)
87838
87764
-
Phe
GAA
[ENA]
¡û
>PHG14100566
HM997019
Podoviridae
Salmonella phage 7-11 beta4 (HM997019)
3053
3127
+
Phe
GAA
[ENA]
¡û
Identical group No.712879 (1 seq.)
>PHG14100633
HQ317387
Podoviridae
Sulfitobacter phage phiCB2047-B (HQ317387)
69842
69768
-
Phe
GAA
[ENA]
¡û
Identical group No.719296 (1 seq.)
>PHG181007832
MH155868
Podoviridae
Streptomyces phage FlowerPower (MH155868)
17496
17568
+
Phe
GAA
[ENA]
¡û
Identical group No.755902 (1 seq.)
>PHG181006824
MG518519
Podoviridae
Streptomyces phage Manuel (MG518519)
17490
17562
+
Phe
GAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK