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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Podoviridae
Anticodon = GTG
HIT:
8 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.318912 (5 seq.)
>PHG181001854
KT962245
Podoviridae
Cellulophaga phage phi4:1_13 (KT962245)
87570
87644
+
His
GTG
[ENA]
¡û
>PHG181001871
KT962246
Podoviridae
Cellulophaga phage phi4:1_18 (KT962246)
87570
87644
+
His
GTG
[ENA]
¡û
>PHG181001888
KT962247
Podoviridae
Cellulophaga phage phi17:2_18 (KT962247)
88023
88097
+
His
GTG
[ENA]
¡û
>PHG14102285
KC821609
Podoviridae
Cellulophaga phage phi17:2 (KC821609)
88023
88097
+
His
GTG
[ENA]
¡û
>PHG14102332
KC821632
Podoviridae
Cellulophaga phage phi4:1 (KC821632)
87570
87644
+
His
GTG
[ENA]
¡û
Identical group No.391402 (2 seq.)
>PHG14102309
KC821612
Podoviridae
Cellulophaga phage phi40:1 (KC821612)
38422
38498
+
His
GTG
[ENA]
¡û
>PHG14102322
KC821614
Podoviridae
Cellulophaga phage phi38:1 (KC821614)
38426
38502
+
His
GTG
[ENA]
¡û
Identical group No.406206 (1 seq.)
>PHG183001286
MG592626
Podoviridae
Vibrio phage 1.262.O._10N.286.51.A9 (MG592626)
924
1000
+
His
GTG
[ENA]
¡û
Identical group No.504466 (4 seq.)
>PHG181006839
MG518520
Podoviridae
Streptomyces phage Immanuel3 (MG518520)
17254
17328
+
His
GTG
[ENA]
¡û
>PHG181007069
MG663582
Podoviridae
Streptomyces phage HaugeAnator (MG663582)
17250
17324
+
His
GTG
[ENA]
¡û
>PHG181007097
MG663584
Podoviridae
Streptomyces phage Romero (MG663584)
17243
17317
+
His
GTG
[ENA]
¡û
>PHG181007111
MG663585
Podoviridae
Streptomyces phage ToriToki (MG663585)
17243
17317
+
His
GTG
[ENA]
¡û
Identical group No.523537 (2 seq.)
>PHG181007083
MG663583
Podoviridae
Streptomyces phage Percastrophe (MG663583)
17244
17318
+
His
GTG
[ENA]
¡û
>PHG181007125
MG663586
Podoviridae
Streptomyces phage ZooBear (MG663586)
17250
17324
+
His
GTG
[ENA]
¡û
Identical group No.619428 (1 seq.)
>PHG181006811
MG515223
Podoviridae
Streptomyces phage WRightOn (MG515223)
17815
17890
+
His
GTG
[ENA]
¡û
Identical group No.808964 (1 seq.)
>PHG181007833
MH155868
Podoviridae
Streptomyces phage FlowerPower (MH155868)
17570
17642
+
His
GTG
[ENA]
¡û
Identical group No.825951 (1 seq.)
>PHG181006825
MG518519
Podoviridae
Streptomyces phage Manuel (MG518519)
17564
17637
+
His
GTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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