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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Podoviridae
Anticodon = TAC
HIT:
7 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.318916 (5 seq.)
>PHG181001862
KT962245
Podoviridae
Cellulophaga phage phi4:1_13 (KT962245)
89470
89544
+
Val
TAC
[ENA]
¡û
>PHG181001879
KT962246
Podoviridae
Cellulophaga phage phi4:1_18 (KT962246)
89470
89544
+
Val
TAC
[ENA]
¡û
>PHG181001896
KT962247
Podoviridae
Cellulophaga phage phi17:2_18 (KT962247)
89736
89810
+
Val
TAC
[ENA]
¡û
>PHG14102294
KC821609
Podoviridae
Cellulophaga phage phi17:2 (KC821609)
89736
89810
+
Val
TAC
[ENA]
¡û
>PHG14102341
KC821632
Podoviridae
Cellulophaga phage phi4:1 (KC821632)
89470
89544
+
Val
TAC
[ENA]
¡û
Identical group No.391403 (2 seq.)
>PHG14102305
KC821612
Podoviridae
Cellulophaga phage phi40:1 (KC821612)
36400
36474
+
Val
TAC
[ENA]
¡û
>PHG14102318
KC821614
Podoviridae
Cellulophaga phage phi38:1 (KC821614)
36402
36476
+
Val
TAC
[ENA]
¡û
Identical group No.793257 (5 seq.)
>PHG181006844
MG518520
Podoviridae
Streptomyces phage Immanuel3 (MG518520)
17916
17988
+
Val
TAC
[ENA]
¡û
>PHG181007074
MG663582
Podoviridae
Streptomyces phage HaugeAnator (MG663582)
17912
17984
+
Val
TAC
[ENA]
¡û
>PHG181007102
MG663584
Podoviridae
Streptomyces phage Romero (MG663584)
17905
17977
+
Val
TAC
[ENA]
¡û
>PHG181007116
MG663585
Podoviridae
Streptomyces phage ToriToki (MG663585)
17905
17977
+
Val
TAC
[ENA]
¡û
>PHG181007130
MG663586
Podoviridae
Streptomyces phage ZooBear (MG663586)
17912
17984
+
Val
TAC
[ENA]
¡û
Identical group No.808965 (1 seq.)
>PHG181007837
MH155868
Podoviridae
Streptomyces phage FlowerPower (MH155868)
17985
18057
+
Val
TAC
[ENA]
¡û
Identical group No.812187 (1 seq.)
>PHG181007088
MG663583
Podoviridae
Streptomyces phage Percastrophe (MG663583)
17845
17917
+
Val
TAC
[ENA]
¡û
Identical group No.825948 (1 seq.)
>PHG181006816
MG515223
Podoviridae
Streptomyces phage WRightOn (MG515223)
18338
18410
+
Val
TAC
[ENA]
¡û
Identical group No.825952 (1 seq.)
>PHG181006830
MG518519
Podoviridae
Streptomyces phage Manuel (MG518519)
18256
18328
+
Val
TAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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