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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Podoviridae
Anticodon = TGC
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.504410 (5 seq.)
>PHG181001857
KT962245
Podoviridae
Cellulophaga phage phi4:1_13 (KT962245)
88170
88243
+
Ala
TGC
[ENA]
¡û
>PHG181001874
KT962246
Podoviridae
Cellulophaga phage phi4:1_18 (KT962246)
88170
88243
+
Ala
TGC
[ENA]
¡û
>PHG181001891
KT962247
Podoviridae
Cellulophaga phage phi17:2_18 (KT962247)
88623
88696
+
Ala
TGC
[ENA]
¡û
>PHG14102289
KC821609
Podoviridae
Cellulophaga phage phi17:2 (KC821609)
88623
88696
+
Ala
TGC
[ENA]
¡û
>PHG14102336
KC821632
Podoviridae
Cellulophaga phage phi4:1 (KC821632)
88170
88243
+
Ala
TGC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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