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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Podoviridae
Anticodon = TTC
HIT:
5 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.318923 (1 seq.)
>PHG181002536
KX098390
Podoviridae
Erwinia phage vB_EamP_Rexella (KX098390)
41301
41377
+
Glu
TTC
[ENA]
¡û
Identical group No.320903 (1 seq.)
>PHG14102643
KF806588
Podoviridae
Erwinia phage Ea9-2 (KF806588)
41091
41167
+
Glu
TTC
[ENA]
¡û
Identical group No.347528 (2 seq.)
>PHG181002529
KX098389
Podoviridae
Erwinia phage vB_EamP_Frozen (KX098389)
40950
41026
+
Glu
TTC
[ENA]
¡û
>PHG181002542
KX098391
Podoviridae
Erwinia phage vB_EamP_Gutmeister (KX098391)
36973
37049
+
Glu
TTC
[ENA]
¡û
Identical group No.684227 (5 seq.)
>PHG181001852
KT962245
Podoviridae
Cellulophaga phage phi4:1_13 (KT962245)
87352
87424
+
Glu
TTC
[ENA]
¡û
>PHG181001869
KT962246
Podoviridae
Cellulophaga phage phi4:1_18 (KT962246)
87352
87424
+
Glu
TTC
[ENA]
¡û
>PHG181001886
KT962247
Podoviridae
Cellulophaga phage phi17:2_18 (KT962247)
87805
87877
+
Glu
TTC
[ENA]
¡û
>PHG14102283
KC821609
Podoviridae
Cellulophaga phage phi17:2 (KC821609)
87805
87877
+
Glu
TTC
[ENA]
¡û
>PHG14102330
KC821632
Podoviridae
Cellulophaga phage phi4:1 (KC821632)
87352
87424
+
Glu
TTC
[ENA]
¡û
Identical group No.734099 (4 seq.)
>PHG14102312
KC821612
Podoviridae
Cellulophaga phage phi40:1 (KC821612)
30646
30574
-
Glu
TTC
[ENA]
¡û
>PHG14102313
KC821612
Podoviridae
Cellulophaga phage phi40:1 (KC821612)
28676
28604
-
Glu
TTC
[ENA]
¡û
>PHG14102325
KC821614
Podoviridae
Cellulophaga phage phi38:1 (KC821614)
30646
30574
-
Glu
TTC
[ENA]
¡û
>PHG14102326
KC821614
Podoviridae
Cellulophaga phage phi38:1 (KC821614)
28676
28604
-
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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