tRNA genes clustered and arranged according to each identical group

Pru Toh Daeng peat swamp (SRP001114)

Anticodon = CCA

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.391567 (6 seq.)
>WENV170660648 JXWU01007703 [JXWU] soil metagenome; rice field; organic control Plot 368 444 + Trp CCA [ENA] ¢þ
>SRA1013986 SRR023821.23691 Pru Toh Daeng peat swamp (SRP001114) 114 190 + Trp CCA [SRA]
>SRA1014007 SRR023821.37942 Pru Toh Daeng peat swamp (SRP001114) 114 190 + Trp CCA [SRA]
>SRA1014034 SRR023821.45944 Pru Toh Daeng peat swamp (SRP001114) 114 190 + Trp CCA [SRA]
>SRA1014058 SRR023821.66687 Pru Toh Daeng peat swamp (SRP001114) 115 191 + Trp CCA [SRA]
>SRA1014065 SRR023821.72624 Pru Toh Daeng peat swamp (SRP001114) 115 191 + Trp CCA [SRA]
Identical group No.458233 (15 seq.)
>W1711416658 MHDV01000097 Nitrospirota Nitrospirae bacterium GWC1_57_7 [MHDV] 10498 10573 + Trp CCA [ENA] ¡û
>W1711416781 MHDZ01000063 Nitrospirota Nitrospirae bacterium GWC2_57_13 [MHDZ] 329 404 + Trp CCA [ENA] ¡û
>W1711416863 MHEC01000038 Nitrospirota Nitrospirae bacterium GWD2_57_8 [MHEC] 11888 11813 - Trp CCA [ENA] ¡û
>WENV180275132 OBHS01016693 [OBHS] metagenome; freshwater sediment 226 151 - Trp CCA [ENA] ¢þ
>WENV180342507 OBLJ01035712 [OBLJ] soil metagenome; Clay 313 238 - Trp CCA [ENA] ¢þ
>WENV180356311 OBNK01012850 [OBNK] sediment metagenome; sediment 121 46 - Trp CCA [ENA] ¢þ
>WENV181285822 OFGU01000567 [OFGU] soil metagenome; Clay 1780 1705 - Trp CCA [ENA] ¢þ
>WENV181286460 OFGW01000004 [OFGW] soil metagenome; Clay 8267 8192 - Trp CCA [ENA] ¢þ
>WENV181287968 OFGY01000482 [OFGY] soil metagenome; Clay 4307 4382 + Trp CCA [ENA] ¢þ
>WENV181292084 OFHD01031364 [OFHD] soil metagenome; Clay 92 167 + Trp CCA [ENA] ¢þ
>WENV181292539 OFHF01000169 [OFHF] soil metagenome; Clay 5633 5558 - Trp CCA [ENA] ¢þ
>WENV181293085 OFHG01000008 [OFHG] soil metagenome; Clay 91857 91782 - Trp CCA [ENA] ¢þ
>WENV181294384 OFHH01000943 [OFHH] soil metagenome; Clay 410 485 + Trp CCA [ENA] ¢þ
>WENV181297005 OFHK01004475 [OFHK] soil metagenome; Clay 559 484 - Trp CCA [ENA] ¢þ
>SRA1014006 SRR023821.37131 Pru Toh Daeng peat swamp (SRP001114) 162 87 - Trp CCA [SRA]
Identical group No.585331 (1 seq.)
>SRA1013975 SRR023821.16658 Pru Toh Daeng peat swamp (SRP001114) 290 215 - Trp CCA [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK