tRNA genes clustered and arranged according to each identical group

Pru Toh Daeng peat swamp (SRP001114)

Anticodon = GCT

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.10966 (1 seq.)
>SRA1013927 SRR023820.42632 Pru Toh Daeng peat swamp (SRP001114) 64 157 + Ser GCT [SRA]
Identical group No.26602 (1 seq.)
>SRA1014046 SRR023821.55106 Pru Toh Daeng peat swamp (SRP001114) 145 236 + Ser GCT [SRA]
Identical group No.31806 (27 seq.)
>WENV180021281 FTEF01001290 [FTEF] metagenome; soil 2437 2527 + Ser GCT [ENA] ¢þ
>WENV180023045 FTHH01000670 [FTHH] metagenome; soil 8705 8615 - Ser GCT [ENA] ¢þ
>WENV180031205 FTJO01009226 [FTJO] metagenome; soil 1348 1438 + Ser GCT [ENA] ¢þ
>WENV180032210 FTJX01041975 [FTJX] metagenome; soil 176 266 + Ser GCT [ENA] ¢þ
>WENV180036638 FVAA010228971 [FVAA] soil metagenome; Soil 91 1 - Ser GCT [ENA] ¢þ
>WENV180095836 MTBK01092603 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 162 252 + Ser GCT [ENA] ¢þ
>WENV180266013 OBEQ011711293 [OBEQ] groundwater metagenome; groundwater 318 228 - Ser GCT [ENA] ¢þ
>WENV180304132 OBJH01059309 [OBJH] soil metagenome; soil 21 111 + Ser GCT [ENA] ¢þ
>WENV180304332 OBJI01002474 [OBJI] soil metagenome; soil 919 829 - Ser GCT [ENA] ¢þ
>WENV180309149 OBJR01594967 [OBJR] soil metagenome; soil 114 204 + Ser GCT [ENA] ¢þ
>WENV180315261 OBKH01051927 [OBKH] soil metagenome; rice field; elevated CO2 plus elevated temperature 195 285 + Ser GCT [ENA] ¢þ
>WENV180343143 OBLK01000016 [OBLK] soil metagenome; Clay 112372 112462 + Ser GCT [ENA] ¢þ
>WENV180351205 OBLQ010033092 [OBLQ] soil metagenome; soil 1138 1048 - Ser GCT [ENA] ¢þ
>WENV181144806 OEHO01099233 [OEHO] metagenome; unknown 82 172 + Ser GCT [ENA] ¢þ
>WENV181170242 OEIV010032957 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 65 155 + Ser GCT [ENA] ¢þ
>WENV181191576 OEPS010121037 [OEPS] soil metagenome; soil 186 96 - Ser GCT [ENA] ¢þ
>WENV181295214 OFHI01004811 [OFHI] soil metagenome; Clay 396 306 - Ser GCT [ENA] ¢þ
>WENV181295643 OFHJ01000052 [OFHJ] soil metagenome; Clay 9142 9232 + Ser GCT [ENA] ¢þ
>WENV181295821 OFHJ01000868 [OFHJ] soil metagenome; Clay 9059 9149 + Ser GCT [ENA] ¢þ
>WENV181378232 OFRA01104136 [OFRA] wastewater metagenome; Lake Maggiore Verbania 220 310 + Ser GCT [ENA] ¢þ
>WENV170013397 AUZX01002186 [AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos 471 381 - Ser GCT [ENA] ¢þ
>WENV170013828 AUZZ01010465 [AUZZ] mine drainage metagenome; submerged non-stratified mat biofilm (B2A) from acid streamer/mats thriving at Los Rueldos 275 365 + Ser GCT [ENA] ¢þ
>WENV170564429 CZKO01000098 [CZKO] soil metagenome genome assembly CiPEHR-AK-2010-FBin.10, contig:; soil 554 464 - Ser GCT [ENA] ¢þ
>WENV170646207 JQGG01030182 [JQGG] wastewater metagenome; domestic wastewater sediment treated with nitrate and nitrite at 100mg /litre each 133 223 + Ser GCT [ENA] ¢þ
>SRA1013999 SRR023821.33477 Pru Toh Daeng peat swamp (SRP001114) 145 235 + Ser GCT [SRA]
>SRA1014015 SRR023821.40527 Pru Toh Daeng peat swamp (SRP001114) 145 235 + Ser GCT [SRA]
>SRA1014072 SRR023821.82182 Pru Toh Daeng peat swamp (SRP001114) 145 235 + Ser GCT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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