tRNA genes clustered and arranged according to each identical group

Rhodophyta

Anticodon = TCC

HIT: 21 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.684392 (1 seq.)
>CHL1810045160 KY709208 Rhodophyta Boldia erythrosiphon UTEX LB2858 (KY709208) 23543 23472 - Gly TCC [ENA] ¡û
Identical group No.750900 (1 seq.)
>CHL1810039449 KY083067 Rhodophyta Compsopogon caeruleus (KY083067) 45893 45822 - Gly TCC [ENA] ¡û
Identical group No.786896 (1 seq.)
>CHL1810011915 KJ513670 Rhodophyta Membranoptera weeksiae (KJ513670) 138415 138343 - Gly TCC [ENA] ¡û
Identical group No.786943 (45 seq.)
>WENV181233266 OFES01000068 [OFES] coral metagenome; NA 9426 9497 + Gly TCC [ENA] ¢þ
>WENV181235119 OFEW01116640 [OFEW] coral metagenome; NA 647 576 - Gly TCC [ENA] ¢þ
>WENV170022080 BCQK01000006 [BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama 19524 19596 + Gly TCC [ENA] ¢þ
>WENV170023571 BCQL01000004 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 14940 15010 + Gly TCC [ENA] ¢þ
>WENV170024434 BCQL01060191 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 388 316 - Gly TCC [ENA] ¢þ
>CHL1810006826 KC153978 Rhodophyta Calliarthron tuberculosum (KC153978) 139791 139719 - Gly TCC [ENA] ¡û
>CHL1810008234 KC464603 Rhodophyta Pyropia haitanensis (KC464603) 26688 26618 - Gly TCC [ENA] ¡û
>CHL1810010860 KF861575 Rhodophyta Gracilaria salicornia (KF861575) 140415 140343 - Gly TCC [ENA] ¡û
>CHL1810024529 KU179794 Rhodophyta Gracilariopsis lemaneiformis (KU179794) 40248 40320 + Gly TCC [ENA] ¡û
>CHL1810028004 KU892652 Rhodophyta Kappaphycus alvarezii (KU892652) 137543 137471 - Gly TCC [ENA] ¡û
>CHL1810038727 KY018922 Rhodophyta Gracilaria changii (KY018922) 46128 46200 + Gly TCC [ENA] ¡û
>CHL1810038798 KY033529 Rhodophyta Sheathia arcuata (KY033529) 147726 147654 - Gly TCC [ENA] ¡û
>CHL1810049758 MF101408 Rhodophyta Dipterocladia arabiensis (MF101408) 64985 65057 + Gly TCC [ENA] ¡û
>CHL1810049807 MF101410 Rhodophyta Laurenciella marilzae (MF101410) 66099 66169 + Gly TCC [ENA] ¡û
>CHL1810049833 MF101411 Rhodophyta Acrosorium ciliolatum (MF101411) 67780 67852 + Gly TCC [ENA] ¡û
>CHL1810049885 MF101415 Rhodophyta Osmundaria fimbriata (MF101415) 70402 70472 + Gly TCC [ENA] ¡û
>CHL1810049981 MF101419 Rhodophyta Bostrychia moritziana (MF101419) 64700 64772 + Gly TCC [ENA] ¡û
>CHL1810050006 MF101420 Rhodophyta Symphyocladia dendroidea (MF101420) 64258 64330 + Gly TCC [ENA] ¡û
>CHL1810050057 MF101422 Rhodophyta Caloglossa beccarii (MF101422) 61770 61842 + Gly TCC [ENA] ¡û
>CHL1810050105 MF101424 Rhodophyta Rhodomela confervoides (MF101424) 65522 65594 + Gly TCC [ENA] ¡û
>CHL1810050131 MF101425 Rhodophyta Polysiphonia brodiei (MF101425) 63520 63590 + Gly TCC [ENA] ¡û
>CHL1810050156 MF101426 Rhodophyta Vertebrata thuyoides (MF101426) 63842 63912 + Gly TCC [ENA] ¡û
>CHL1810050181 MF101427 Rhodophyta Polysiphonia elongata (MF101427) 63838 63908 + Gly TCC [ENA] ¡û
>CHL1810050206 MF101428 Rhodophyta Polysiphonia stricta (MF101428) 64963 65033 + Gly TCC [ENA] ¡û
>CHL1810050283 MF101433 Rhodophyta Vertebrata isogona (MF101433) 63836 63907 + Gly TCC [ENA] ¡û
>CHL1810050308 MF101434 Rhodophyta Herposiphonia versicolor (MF101434) 63808 63878 + Gly TCC [ENA] ¡û
>CHL1810050332 MF101436 Rhodophyta Dasya naccarioides (MF101436) 64287 64359 + Gly TCC [ENA] ¡û
>CHL1810050356 MF101437 Rhodophyta Melanothamnus harveyi (MF101437) 62268 62338 + Gly TCC [ENA] ¡û
>CHL1810050381 MF101438 Rhodophyta Polysiphonia scopulorum (MF101438) 64266 64336 + Gly TCC [ENA] ¡û
>CHL1810050407 MF101439 Rhodophyta Vertebrata australis (MF101439) 63915 63985 + Gly TCC [ENA] ¡û
>CHL1810050432 MF101440 Rhodophyta Ophidocladus simpliciusculus (MF101440) 64409 64479 + Gly TCC [ENA] ¡û
>CHL1810050458 MF101441 Rhodophyta Spyridia filamentosa (MF101441) 68394 68466 + Gly TCC [ENA] ¡û
>CHL1810050509 MF101443 Rhodophyta Dasyclonium flaccidum (MF101443) 65678 65750 + Gly TCC [ENA] ¡û
>CHL1810050584 MF101446 Rhodophyta Gredgaria maugeana (MF101446) 64279 64351 + Gly TCC [ENA] ¡û
>CHL1810050609 MF101447 Rhodophyta Thaumatella adunca (MF101447) 65270 65340 + Gly TCC [ENA] ¡û
>CHL1810050634 MF101448 Rhodophyta Lophocladia kuetzingii (MF101448) 64790 64861 + Gly TCC [ENA] ¡û
>CHL1810050660 MF101449 Rhodophyta Kuetzingia canaliculata (MF101449) 68816 68888 + Gly TCC [ENA] ¡û
>CHL1810050685 MF101450 Rhodophyta Cliftonaea pectinata (MF101450) 68164 68236 + Gly TCC [ENA] ¡û
>CHL1810050710 MF101452 Rhodophyta Taenioma perpusillum (MF101452) 60879 60951 + Gly TCC [ENA] ¡û
>CHL1810050735 MF101454 Rhodophyta Polysiphonia schneideri (MF101454) 61282 61354 + Gly TCC [ENA] ¡û
>CHL1810050760 MF101455 Rhodophyta Dictyomenia sonderi (MF101455) 64221 64293 + Gly TCC [ENA] ¡û
>CHL1810060910 MH396013 Rhodophyta Gracilaria vermiculophylla (MH396013) 68841 68913 + Gly TCC [ENA] ¡û
>CHL090101587 AY673996 Rhodophyta Gracilaria tenuistipitata var. liui 144364 144292 - Gly TCC [ENA] ¡û
>CHL090103183 U38804 Rhodophyta Porphyra purpurea 26648 26578 - Gly TCC [ENA] ¡û
>CHL090900033 AF494278 Viridiplantae Chaetosphaeridium globosum 21624 20973 - Gly TCC [ENA] ¡û
Identical group No.786945 (1 seq.)
>CHL1810049910 MF101416 Rhodophyta Caloglossa monosticha (MF101416) 61306 61378 + Gly TCC [ENA] ¡û
Identical group No.789685 (3 seq.)
>WENV181406141 OGCG01000007 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 4280 4350 + Gly TCC [ENA] ¢þ
>CHL090100049 AB002583 Rhodophyta Cyanidioschyzon merolae 143526 143456 - Gly TCC [ENA] ¡û
>CHL090101431 AY286123 Rhodophyta Cyanidioschyzon merolae strain DBV201 71804 71874 + Gly TCC [ENA] ¡û
Identical group No.793295 (1 seq.)
>CHL1810050232 MF101430 Rhodophyta Bryothamnion seaforthii (MF101430) 70312 70382 + Gly TCC [ENA] ¡û
Identical group No.802101 (1 seq.)
>CHL1810058647 MG598531 Rhodophyta Grateloupia filicina (MG598531) 193017 192945 - Gly TCC [ENA] ¡û
Identical group No.802102 (1 seq.)
>CHL1830002177 MF101423 Rhodophyta Polysiphonia sertularioides (MF101423) 63477 63547 + Gly TCC [ENA] ¡û
Identical group No.805630 (1 seq.)
>CHL1810045178 KY709209 Rhodophyta Bulboplastis apyrenoidosa NIES-2742 (KY709209) 551125 551053 - Gly TCC [ENA] ¡û
Identical group No.805634 (2 seq.)
>CHL1810049934 MF101417 Rhodophyta Bostrychia tenella (MF101417) 65656 65728 + Gly TCC [ENA] ¡û
>CHL1810050534 MF101444 Rhodophyta Dipterosiphonia australica (MF101444) 64189 64261 + Gly TCC [ENA] ¡û
Identical group No.808998 (2 seq.)
>CHL1810050483 MF101442 Rhodophyta Thuretia quercifolia (MF101442) 67235 67307 + Gly TCC [ENA] ¡û
>CHL1810050812 MF101467 Rhodophyta Tolypiocladia glomerulata (MF101467) 63187 63257 + Gly TCC [ENA] ¡û
Identical group No.812217 (1 seq.)
>CHL1830002162 MF101418 Rhodophyta Caloglossa intermedia (MF101418) 61833 61905 + Gly TCC [ENA] ¡û
Identical group No.815042 (3 seq.)
>CHL1810049858 MF101413 Rhodophyta Periphykon beckeri (MF101413) 64811 64883 + Gly TCC [ENA] ¡û
>CHL1810050786 MF101465 Rhodophyta Digenea simplex (MF101465) 66570 66640 + Gly TCC [ENA] ¡û
>CHL090900128 AP005672 Viridiplantae Physcomitrella patens subsp. patens 61069 61691 + Gly TCC [ENA] ¡û
Identical group No.816402 (1 seq.)
>CHL090100892 AP006715 Rhodophyta Porphyra yezoensis 26755 26685 - Gly TCC [ENA] ¡û
Identical group No.816424 (1 seq.)
>CHL090100269 AF022186 Rhodophyta Cyanidium caldarium 24675 24605 - Gly TCC [ENA] ¡û
Identical group No.820599 (1 seq.)
>CHL1810050032 MF101421 Rhodophyta Bostrychia simpliciuscula (MF101421) 63191 63263 + Gly TCC [ENA] ¡û
Identical group No.825964 (1 seq.)
>CHL1810050258 MF101432 Rhodophyta Polysiphonia infestans (MF101432) 62627 62697 + Gly TCC [ENA] ¡û
Identical group No.828073 (1 seq.)
>CHL1810000542 AP012987 Rhodophyta Porphyridium purpureum (AP012987) 1867 1939 + Gly TCC [ENA] ¡û
Identical group No.828095 (1 seq.)
>CHL1810050559 MF101445 Rhodophyta Sonderella linearis (MF101445) 65062 65134 + Gly TCC [ENA] ¡û
Identical group No.833188 (1 seq.)
>CHL1810049783 MF101409 Rhodophyta Platysiphonia delicata (MF101409) 65185 65257 + Gly TCC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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