tRNA genes clustered and arranged according to each identical group

Sediment metagenome

Anticodon = GCC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.659415 (52 seq.)
>W1711391809 MEMB01000006 Alphaproteobacteria Alphaproteobacteria bacterium GWF2_58_20 [MEMB] 79117 79043 - Gly GCC [ENA] ¡û
>WENV012211 AACY020333430 Marine microbial communities from Global Ocean Sampling (GOS) 1419 1343 - Gly GCC [ENA]
>WENV180273471 OBES01000996 [OBES] marine metagenome; marine 595 669 + Gly GCC [ENA] ¢þ
>WENV180595175 OCPB01036100 [OCPB] marine metagenome; ENVO:00002149 24 98 + Gly GCC [ENA] ¢þ
>WENV183512754 OMKS01001266 [OMKS] sediment metagenome; hot spring sediment 19684 19758 + Gly GCC [ENA] ¢þ
>WENV183512803 OMKS01001388 [OMKS] sediment metagenome; hot spring sediment 20492 20566 + Gly GCC [ENA] ¢þ
>WENV170124627 CENO01220756 [CENO] marine metagenome genome assembly TARA_033_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1605 1679 + Gly GCC [ENA] ¢þ
>WENV170137487 CENW01032011 [CENW] marine metagenome genome assembly TARA_032_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 225 151 - Gly GCC [ENA] ¢þ
>WENV170157347 CEOJ01054218 [CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 557 631 + Gly GCC [ENA] ¢þ
>WENV170188017 CEPB01009091 [CEPB] marine metagenome genome assembly TARA_057_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 273 347 + Gly GCC [ENA] ¢þ
>WENV170191174 CEPC01260009 [CEPC] marine metagenome genome assembly TARA_064_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 225 151 - Gly GCC [ENA] ¢þ
>WENV170194461 CEPJ01035835 [CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 249 323 + Gly GCC [ENA] ¢þ
>WENV170198776 CEPL01041175 [CEPL] marine metagenome genome assembly TARA_045_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 419 493 + Gly GCC [ENA] ¢þ
>WENV170339022 CETB01084729 [CETB] marine metagenome genome assembly TARA_112_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 545 619 + Gly GCC [ENA] ¢þ
>WENV170367837 CETP01202758 [CETP] marine metagenome genome assembly TARA_122_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1939 2013 + Gly GCC [ENA] ¢þ
>WENV170403185 CEUF01045198 [CEUF] marine metagenome genome assembly TARA_138_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 303 377 + Gly GCC [ENA] ¢þ
>WENV170410668 CEUJ01123246 [CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 778 704 - Gly GCC [ENA] ¢þ
>WENV170415383 CEUL01037714 [CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 190 116 - Gly GCC [ENA] ¢þ
>WENV170426954 CEUQ01131897 [CEUQ] marine metagenome genome assembly TARA_124_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 320 246 - Gly GCC [ENA] ¢þ
>WENV170431962 CEUS01061295 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1582 1653 + Gly GCC [ENA] ¢þ
>WENV170437308 CEUU01028391 [CEUU] marine metagenome genome assembly TARA_122_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 891 817 - Gly GCC [ENA] ¢þ
>WENV170440730 CEUV01124603 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 83 9 - Gly GCC [ENA] ¢þ
>WENV170443424 CEUW01203423 [CEUW] marine metagenome genome assembly TARA_122_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 83 9 - Gly GCC [ENA] ¢þ
>WENV170448866 CEUZ01032925 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 103 177 + Gly GCC [ENA] ¢þ
>WENV170465186 CEVD01431568 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 68 142 + Gly GCC [ENA] ¢þ
>WENV170466942 CEVE01099709 [CEVE] marine metagenome genome assembly TARA_124_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 568 642 + Gly GCC [ENA] ¢þ
>WENV170468404 CEVF01031884 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2298 2224 - Gly GCC [ENA] ¢þ
>WENV170471834 CEVG01111198 [CEVG] marine metagenome genome assembly TARA_140_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2776 2850 + Gly GCC [ENA] ¢þ
>WENV170473108 CEVH01005649 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 597 671 + Gly GCC [ENA] ¢þ
>WENV170479977 CEVL01052294 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 537 611 + Gly GCC [ENA] ¢þ
>WENV170578563 FUFK010019460 [FUFK] metagenome; unknown 82 8 - Gly GCC [ENA] ¢þ
>WENV170579140 FUFK010038131 [FUFK] metagenome; unknown 50865 50791 - Gly GCC [ENA] ¢þ
>WENV170579631 FUFK010040133 [FUFK] metagenome; unknown 14162 14236 + Gly GCC [ENA] ¢þ
>WENV170586027 FUFK010354394 [FUFK] metagenome; unknown 1787 1861 + Gly GCC [ENA] ¢þ
>WENV170591106 FUFK010752101 [FUFK] metagenome; unknown 14235 14309 + Gly GCC [ENA] ¢þ
>WENV170595522 FUFK011835069 [FUFK] metagenome; unknown 104 178 + Gly GCC [ENA] ¢þ
>WENV170908008 MDTE01059437 [MDTE] marine metagenome; seawater 1086 1012 - Gly GCC [ENA] ¢þ
>WENV170973348 MTKY01029886 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1138 1212 + Gly GCC [ENA] ¢þ
>WENV170973349 MTKY01029886 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1332 1406 + Gly GCC [ENA] ¢þ
>WENV170977603 MTKZ01027385 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 2230 2156 - Gly GCC [ENA] ¢þ
>WENV026499 AACY020970887 Marine microbial communities from Global Ocean Sampling (GOS) 230 154 - Gly GCC [ENA]
>SRA1003775 SRR002327.176209 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 180 106 - Gly GCC [SRA]
>SRA1008665 SRR020490.449930 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 62 136 + Gly GCC [SRA]
>WENV032230 AACY021428151 Marine microbial communities from Global Ocean Sampling (GOS) 357 281 - Gly GCC [ENA]
>W10106938 ACYY01000023 Alphaproteobacteria Rhodobacter sp. SW2 [ACYY] 21664 21590 - Gly GCC [ENA] ¡û
>WENV11100202 ADZX01000253 Sediment metagenome 1165 1239 + Gly GCC [ENA] ¡û
>W11109227 ACYY01000023 Alphaproteobacteria Rhodobacter sp. SW2 [ACYY] 21664 21590 - Gly GCC [ENA] ¡û
>W1511327813 JQIP01000024 Campylobacterota Sulfurovum sp. AS07-7 [JQIP] 11660 11734 + Gly GCC [ENA] ¡û
>WENV042256 AACY022223538 Marine microbial communities from Global Ocean Sampling (GOS) 578 502 - Gly GCC [ENA]
>WENV004373 AACY020121858 Marine microbial communities from Global Ocean Sampling (GOS) 787 713 - Gly GCC [ENA]
>WENV052708 AACY023044035 Marine microbial communities from Global Ocean Sampling (GOS) 580 656 + Gly GCC [ENA]
>WENV076238 AACY024084920 Marine microbial communities from Global Ocean Sampling (GOS) 487 563 + Gly GCC [ENA]
Identical group No.821286 (1 seq.)
>WENV11100213 ADZX01000409 Sediment metagenome 2104 2177 + Gly GCC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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