tRNA genes clustered and arranged according to each identical group

Sediment metagenome

Anticodon = TAC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.408651 (1 seq.)
>WENV11100227 ADZX01000636 Sediment metagenome 8072 7996 - Val TAC [ENA] ¡û
Identical group No.464197 (60 seq.)
>W1711583425 MNXE01000033 Hydrogenophilia Hydrogenophilaceae bacterium CG1_02_62_390 [MNXE] 23716 23641 - Val TAC [ENA] ¡û
>W1711583859 MNXT01000291 Betaproteobacteria Betaproteobacteria bacterium CG2_30_59_46 [MNXT] 6533 6608 + Val TAC [ENA] ¡û
>C171089764 CP019169 Betaproteobacteria Betaproteobacteria bacterium GR16-43 [CP019169] 2617757 2617832 + Val TAC - ¡û
>W131155815 AQOW01000032 Gammaproteobacteria Thioalkalivibrio sp. HL-Eb18 [AQOW] 121833 121908 + Val TAC [ENA] ¡û
>W131156028 AQPB01000034 Gammaproteobacteria Thioalkalivibrio sp. ALE6 [AQPB] 10395 10320 - Val TAC [ENA] ¡û
>W131161351 AQXP01000046 Gammaproteobacteria Thioalkalivibrio sp. ALJ11 [AQXP] 54061 53986 - Val TAC [ENA] ¡û
>W131161709 AQXY01000021 Gammaproteobacteria Thioalkalivibrio sp. ALE14 [AQXY] 10346 10271 - Val TAC [ENA] ¡û
>W131161962 AQYE01000008 Gammaproteobacteria Thioalkalivibrio sp. ALJ9 [AQYE] 258148 258223 + Val TAC [ENA] ¡û
>W131170357 ARFM01000003 Gammaproteobacteria Thioalkalivibrio versutus AL2 [ARFM] 349938 349863 - Val TAC [ENA] ¡û
>W131173720 ARHW01000013 Gammaproteobacteria Thioalkalivibrio sp. ALJ3 [ARHW] 53946 53871 - Val TAC [ENA] ¡û
>W131173750 ARHX01000010 Gammaproteobacteria Thioalkalivibrio sp. ALJ4 [ARHX] 152023 152098 + Val TAC [ENA] ¡û
>W131173796 ARHY01000009 Gammaproteobacteria Thioalkalivibrio sp. ALJ5 [ARHY] 349444 349369 - Val TAC [ENA] ¡û
>W131173876 ARIA01000012 Gammaproteobacteria Thioalkalivibrio sp. ALE25 [ARIA] 70274 70199 - Val TAC [ENA] ¡û
>W131173940 ARIB01000014 Gammaproteobacteria Thioalkalivibrio sp. ALJ10 [ARIB] 53973 53898 - Val TAC [ENA] ¡û
>W131174008 ARID01000021 Gammaproteobacteria Thioalkalivibrio sp. ALJ16 [ARID] 75316 75391 + Val TAC [ENA] ¡û
>W131174107 ARIF01000012 Gammaproteobacteria Thioalkalivibrio sp. ALJ8 [ARIF] 272019 271944 - Val TAC [ENA] ¡û
>W131174138 ARIG01000009 Gammaproteobacteria Thioalkalivibrio sp. ALE31 [ARIG] 51030 50955 - Val TAC [ENA] ¡û
>W131174184 ARIH01000017 Gammaproteobacteria Thioalkalivibrio sp. ALE28 [ARIH] 10500 10425 - Val TAC [ENA] ¡û
>W131174240 ARII01000020 Gammaproteobacteria Thioalkalivibrio sp. ALE9 [ARII] 70285 70210 - Val TAC [ENA] ¡û
>W131174274 ARIJ01000013 Gammaproteobacteria Thioalkalivibrio sp. ALE30 [ARIJ] 136780 136705 - Val TAC [ENA] ¡û
>W131174345 ARIK01000024 Gammaproteobacteria Thioalkalivibrio sp. ALE27 [ARIK] 214095 214020 - Val TAC [ENA] ¡û
>W131175127 ARIZ01000026 Gammaproteobacteria Thioalkalivibrio sp. ALJ24 [ARIZ] 111819 111894 + Val TAC [ENA] ¡û
>W131175241 ARJC01000016 Gammaproteobacteria Thioalkalivibrio sp. AKL11 [ARJC] 13151 13076 - Val TAC [ENA] ¡û
>W131176323 ARJY01000014 Gammaproteobacteria Thioalkalivibrio sp. ARh4 [ARJY] 232550 232475 - Val TAC [ENA] ¡û
>W131176366 ARJZ01000009 Gammaproteobacteria Thioalkalivibrio sp. ALgr1 [ARJZ] 557040 556965 - Val TAC [ENA] ¡û
>W131176416 ARKA01000010 Gammaproteobacteria Thioalkalivibrio sp. ALJ12 [ARKA] 1082547 1082622 + Val TAC [ENA] ¡û
>W131176466 ARKB01000014 Gammaproteobacteria Thioalkalivibrio sp. ALJ2 [ARKB] 806253 806328 + Val TAC [ENA] ¡û
>W131177064 ARKN01000004 Gammaproteobacteria Thioalkalivibrio sp. AL5 [ARKN] 349444 349369 - Val TAC [ENA] ¡û
>W131177099 ARKO01000001 Gammaproteobacteria Thioalkalivibrio sp. ALJ20 [ARKO] 1026703 1026778 + Val TAC [ENA] ¡û
>W131177178 ARKP01000002 Gammaproteobacteria Thioalkalivibrio sp. ALJ21 [ARKP] 50782 50707 - Val TAC [ENA] ¡û
>W131178055 ARLG01000023 Gammaproteobacteria Thioalkalivibrio sp. ALE12 [ARLG] 85803 85728 - Val TAC [ENA] ¡û
>W131178360 ARLN01000005 Gammaproteobacteria Thioalkalivibrio sp. ALD1 [ARLN] 155513 155588 + Val TAC [ENA] ¡û
>W131178511 ARLQ01000031 Gammaproteobacteria Thioalkalivibrio sp. ALE16 [ARLQ] 50410 50335 - Val TAC [ENA] ¡û
>W131178596 ARLR01000005 Gammaproteobacteria Thioalkalivibrio sp. AL21 [ARLR] 145894 145969 + Val TAC [ENA] ¡û
>W131178788 ARLV01000012 Gammaproteobacteria Thioalkalivibrio sp. ALRh [ARLV] 50569 50494 - Val TAC [ENA] ¡û
>W131178831 ARLW01000018 Gammaproteobacteria Thioalkalivibrio sp. ALE22 [ARLW] 207478 207403 - Val TAC [ENA] ¡û
>W131178907 ARLY01000013 Gammaproteobacteria Thioalkalivibrio sp. ALgr5 [ARLY] 70342 70267 - Val TAC [ENA] ¡û
>W131179710 ARMP01000023 Gammaproteobacteria Thioalkalivibrio sp. ALJT [ARMP] 175180 175105 - Val TAC [ENA] ¡û
>W131185587 ARTU01000011 Gammaproteobacteria Thioalkalivibrio sp. ALJ15 [ARTU] 496989 496914 - Val TAC [ENA] ¡û
>W131214709 ATUK01000012 Gammaproteobacteria Thioalkalivibrio sp. AKL19 [ATUK] 130538 130463 - Val TAC [ENA] ¡û
>W131225664 AUDT01000009 Gammaproteobacteria Thioalkalivibrio sp. ALE17 [AUDT] 74924 74999 + Val TAC [ENA] ¡û
>WENV180000130 CZVZ01002104 [CZVZ] metagenome; unknown 4756 4831 + Val TAC [ENA] ¢þ
>WENV180296721 OBJA01001998 [OBJA] soil metagenome; sediment, water from around vicinity 5618 5543 - Val TAC [ENA] ¢þ
>WENV180352062 OBLQ010158122 [OBLQ] soil metagenome; soil 662 737 + Val TAC [ENA] ¢þ
>WENV183660212 ORJL010004804 [ORJL] groundwater metagenome; groundwater 290 215 - Val TAC [ENA] ¢þ
>WENV183685450 ORMF010851501 [ORMF] groundwater metagenome; groundwater 549 624 + Val TAC [ENA] ¢þ
>WENV183689586 ORMF011462583 [ORMF] groundwater metagenome; groundwater 87412 87487 + Val TAC [ENA] ¢þ
>WENV183690429 ORMF011596190 [ORMF] groundwater metagenome; groundwater 6294 6369 + Val TAC [ENA] ¢þ
>WENV170556065 CXWL01004504 [CXWL] groundwater metagenome; biofilm material 341 266 - Val TAC [ENA] ¢þ
>WENV170557944 CXWL01043701 [CXWL] groundwater metagenome; biofilm material 174 99 - Val TAC [ENA] ¢þ
>WENV170639444 JFJP01002817 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 6295 6220 - Val TAC [ENA] ¢þ
>WENV170703182 LKMJ01007708 [LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake 2813 2888 + Val TAC [ENA] ¢þ
>WENV170705789 LNAP01000303 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 47244 47169 - Val TAC [ENA] ¢þ
>W09125861 ACIU01000002 Gammaproteobacteria Thioalkalivibrio sp. K90mix [ACIU] K90mix [ACIU] 300579 300504 - Val TAC [ENA] ¡û
>C191004289 AP018718 Betaproteobacteria Sulfuricystis multivorans J5B [AP018718] 1280666 1280741 + Val TAC - ¡û
>C191007518 AP019373 Betaproteobacteria Sulfuricystis thermophila M52 [AP019373] 1247611 1247686 + Val TAC - ¡û
>C10113285 CP001905 Gammaproteobacteria Thioalkalivibrio sp. K90mix [CP001905] 609067 609142 + Val TAC [Ensembl] ¡û
>WENV11100218 ADZX01000447 Sediment metagenome 3948 3873 - Val TAC [ENA] ¡û
>W11168246 AFNV01000068 Gammaproteobacteria Salinisphaera shabanensis E1L3A [AFNV] 8512 8587 + Val TAC [ENA] ¡û
>W1710599747 FTPK01000001 Gammaproteobacteria Ectothiorhodosinus mongolicus [FTPK] 717385 717310 - Val TAC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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