tRNA genes clustered and arranged according to each identical group

Siphoviridae

Anticodon = TAA

HIT: 23 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.40393 (2 seq.)
>PHG181004798 MF001358 Siphoviridae Enterococcus phage EF1 (MF001358) 44290 44377 + Leu TAA [ENA] ¡û
>PHG181004830 MF001361 Siphoviridae Enterococcus phage EF5 (MF001361) 73056 72969 - Leu TAA [ENA] ¡û
Identical group No.80220 (4 seq.)
>PHG181002481 KU998252 Siphoviridae Gordonia phage PatrickStar (KU998252) 70577 70491 - Leu TAA [ENA] ¡û
>PHG181002482 KU998253 Siphoviridae Gordonia phage Orchid (KU998253) 70578 70492 - Leu TAA [ENA] ¡û
>PHG181002483 KU998254 Siphoviridae Gordonia phage Kampe (KU998254) 70577 70491 - Leu TAA [ENA] ¡û
>PHG181008321 MH479923 Siphoviridae Gordonia phage RobinSparkles (MH479923) 71092 71006 - Leu TAA [ENA] ¡û
Identical group No.111375 (2 seq.)
>PHG181004409 KY883654 Siphoviridae Vibrio phage JSF10 (KY883654) 8035 7948 - Leu TAA [ENA] ¡û
>PHG181004426 KY883655 Siphoviridae Vibrio phage JSF12 (KY883655) 25960 26047 + Leu TAA [ENA] ¡û
Identical group No.114483 (58 seq.)
>W1710816566 LKLE01000031 Bacillota Lactococcus lactis subsp. lactis [LKLE] 198737 198652 - Leu TAA [ENA] ¡û
>W1710817091 LKLO01000049 Bacillota Lactococcus lactis subsp. lactis [LKLO] 102087 102002 - Leu TAA [ENA] ¡û
>W1710817321 LKLS01000135 Bacillota Lactococcus lactis subsp. lactis [LKLS] 449 534 + Leu TAA [ENA] ¡û
>W1710817371 LKLT01000101 Bacillota Lactococcus lactis subsp. lactis [LKLT] 269 186 - Leu TAA [ENA] ¡û
>W1710817472 LKLV01000090 Bacillota Lactococcus lactis subsp. lactis [LKLV] 2588 2671 + Leu TAA [ENA] ¡û
>W1710818342 LKPE01000014 Bacillota Lactococcus lactis subsp. lactis bv. diacetylactis [LKPE] 4501 4586 + Leu TAA [ENA] ¡û
>W131187959 ASAE01000210 Bacillota Lactococcus lactis subsp. lactis NCDO 2118 [ASAE] 2988 2903 - Leu TAA [ENA] ¡û
>W131252347 CBLU010000006 Bacillota Lactococcus lactis subsp. lactis A12 [CBLU] 340448 340363 - Leu TAA [ENA] ¡û
>W1711738647 MUBH01000037 Bacillota Lactococcus lactis subsp. lactis [MUBH] 331 246 - Leu TAA [ENA] ¡û
>C171042346 CP015895 Bacillota Lactococcus lactis subsp. lactis 184 [CP015895] 2036484 2036399 - Leu TAA - ¡û
>C171042403 CP015896 Bacillota Lactococcus lactis [CP015896] 2100484 2100399 - Leu TAA - ¡û
>C171042522 CP015898 Bacillota Lactococcus lactis subsp. lactis C10 [CP015898] 1771940 1771857 - Leu TAA - ¡û
>C171043008 CP015906 Bacillota Lactococcus lactis subsp. lactis UC77 [CP015906] 2168906 2168821 - Leu TAA - ¡û
>C171043136 CP015908 Bacillota Lactococcus lactis subsp. lactis UL8 [CP015908] 1769893 1769810 - Leu TAA - ¡û
>C171128669 LT599049 Bacillota Lactococcus lactis subsp. lactis A12 [LT599049] 2034348 2034263 - Leu TAA - ¡û
>C012020 AE005176 Bacillota Lactococcus lactis subsp. lactis Il1403 IL1403 [AE005176] 2012621 2012538 - Leu TAA [Ensembl] ¡û
>WENV180182433 OAWO01030647 [OAWO] human gut metagenome; faeces 156 71 - Leu TAA [ENA] ¢þ
>WENV180192719 OAXJ01063863 [OAXJ] human gut metagenome; faeces 73 158 + Leu TAA [ENA] ¢þ
>WENV180502976 OCAM01001026 [OCAM] human gut metagenome; faeces 1897 1982 + Leu TAA [ENA] ¢þ
>W141075848 ATBD01000107 Bacillota Lactococcus lactis subsp. lactis bv. diacetylactis str. TIFN4 [ATBD] 515 430 - Leu TAA [ENA] ¡û
>W141075967 ATBF01000086 Bacillota Lactococcus lactis subsp. lactis bv. diacetylactis str. TIFN2 [ATBF] 651 566 - Leu TAA [ENA] ¡û
>WENV181581792 OGKA01074590 [OGKA] metagenome; Human gut stool 261 346 + Leu TAA [ENA] ¢þ
>W141171170 AXZK01000115 Bacillota Lactococcus lactis subsp. lactis bv. diacetylactis str. LD61 [AXZK] 324 239 - Leu TAA [ENA] ¡û
>WENV181816412 OGTL01002846 [OGTL] human gut metagenome; faeces 9550 9467 - Leu TAA [ENA] ¢þ
>WENV183407556 OMAC01001014 [OMAC] human gut metagenome; feces 8270 8185 - Leu TAA [ENA] ¢þ
>WENV183427962 OMBN01001423 [OMBN] human gut metagenome; feces 7943 7860 - Leu TAA [ENA] ¢þ
>WENV183428960 OMBO01000771 [OMBO] human gut metagenome; feces 16244 16159 - Leu TAA [ENA] ¢þ
>WENV183470331 OMEJ01023986 [OMEJ] human gut metagenome; feces 211 126 - Leu TAA [ENA] ¢þ
>WENV183473241 OMER01001779 [OMER] human gut metagenome; feces 7040 6955 - Leu TAA [ENA] ¢þ
>WENV183511927 OMJG01014833 [OMJG] food metagenome; Cotija cheese 864 949 + Leu TAA [ENA] ¢þ
>PHG0100055 AF323672 Siphoviridae Lactococcus phage bIL311 URLIE 9 (AF323672) 13135 13220 + Leu TAA [ENA] ¡û
>C191108598 CP033607 Bacillota Lactococcus lactis IL1403 [CP033607] 2012694 2012609 - Leu TAA - ¡û
>W1910804827 MTJP01000010 Bacillota Lactococcus lactis 21 [MTJP] 16478 16393 - Leu TAA [ENA] ¡û
>W1911503424 OESF01000065 Bacillota Lactococcus lactis [OESF] 4458 4543 + Leu TAA [ENA] ¡û
>W1911503523 OESH01000080 Bacillota Lactococcus lactis [OESH] 3457 3542 + Leu TAA [ENA] ¡û
>W1911503577 OESI01000072 Bacillota Lactococcus lactis [OESI] 4469 4554 + Leu TAA [ENA] ¡û
>W1911503688 OESK01000217 Bacillota Lactococcus lactis [OESK] 61 146 + Leu TAA [ENA] ¡û
>W1911532027 OGTW01000012 Bacillota Lactococcus lactis [OGTW] 12062 12147 + Leu TAA [ENA] ¡û
>W1911532076 OGTW02000012 Bacillota Lactococcus lactis [OGTW] 12062 12147 + Leu TAA [ENA] ¡û
>W1911534463 OLMC01000038 Bacillota Lactococcus lactis subsp. lactis CF112 [OLMC] 4462 4547 + Leu TAA [ENA] ¡û
>W1911534529 OLME01000019 Bacillota Lactococcus lactis subsp. lactis CF111 [OLME] 4444 4529 + Leu TAA [ENA] ¡û
>W1810270753 PREW01000001 Bacillota Lactococcus lactis PAZ [PREW] 110969 111054 + Leu TAA [ENA] ¡û
>C151042521 CP009054 Bacillota Lactococcus lactis subsp. lactis NCDO 2118 [CP009054] 2069274 2069189 - Leu TAA [Ensembl] ¡û
>C151063796 CP010050 Bacillota Lactococcus lactis subsp. lactis S0 [CP010050] 1903725 1903640 - Leu TAA [Ensembl] ¡û
>C10108561 CP001834 Bacillota Lactococcus lactis subsp. lactis KF147 [CP001834] 2061384 2061299 - Leu TAA [Ensembl] ¡û
>W1511584245 LAVD01000086 Bacillota Lactococcus lactis subsp. lactis DPC6853 [LAVD] 14788 14703 - Leu TAA [ENA] ¡û
>W1610529975 JQCM01000013 Bacillota Lactococcus lactis subsp. lactis [JQCM] 53420 53335 - Leu TAA [ENA] ¡û
>W1610586036 LDEK01000007 Bacillota Lactococcus lactis [LDEK] 215736 215651 - Leu TAA [ENA] ¡û
>W1610638071 LIWD01000179 Bacillota Lactococcus lactis subsp. lactis bv. diacetylactis [LIWD] 25273 25188 - Leu TAA [ENA] ¡û
>W1610680554 LKLE01000031 Bacillota Lactococcus lactis subsp. lactis [LKLE] 198737 198652 - Leu TAA [ENA] ¡û
>W1610681079 LKLO01000049 Bacillota Lactococcus lactis subsp. lactis [LKLO] 102087 102002 - Leu TAA [ENA] ¡û
>W1610681309 LKLS01000135 Bacillota Lactococcus lactis subsp. lactis [LKLS] 449 534 + Leu TAA [ENA] ¡û
>W1610681359 LKLT01000101 Bacillota Lactococcus lactis subsp. lactis [LKLT] 269 186 - Leu TAA [ENA] ¡û
>W1610681460 LKLV01000090 Bacillota Lactococcus lactis subsp. lactis [LKLV] 2588 2671 + Leu TAA [ENA] ¡û
>W1610682749 LKPE01000014 Bacillota Lactococcus lactis subsp. lactis bv. diacetylactis [LKPE] 4501 4586 + Leu TAA [ENA] ¡û
>W1710631565 JQCM01000013 Bacillota Lactococcus lactis subsp. lactis [JQCM] 53420 53335 - Leu TAA [ENA] ¡û
>W1710705316 LDEK01000007 Bacillota Lactococcus lactis [LDEK] 215736 215651 - Leu TAA [ENA] ¡û
>W1710773746 LIWD01000179 Bacillota Lactococcus lactis subsp. lactis bv. diacetylactis [LIWD] 25273 25188 - Leu TAA [ENA] ¡û
Identical group No.144975 (1 seq.)
>PHG14101494 JQ340389 Siphoviridae Vibrio phage pVp-1 STSV2 (JQ340389) 45497 45583 + Leu TAA [ENA] ¡û
Identical group No.146437 (2 seq.)
>PHG181007039 MG649966 Siphoviridae Vibrio phage Ceto (MG649966) 81669 81755 + Leu TAA [ENA] ¡û
>PHG181007055 MG649967 Siphoviridae Vibrio phage Thalassa (MG649967) 84097 84183 + Leu TAA [ENA] ¡û
Identical group No.157071 (1 seq.)
>PHG181003658 KX845404 Siphoviridae Klebsiella phage vB_Kpn_IME260 (KX845404) 31663 31578 - Leu TAA [ENA] ¡û
Identical group No.166093 (2 seq.)
>PHG181008133 MH370376 Siphoviridae Salmonella phage S126 (MH370376) 71094 71179 + Leu TAA [ENA] ¡û
>PHG14100409 HE956708 Siphoviridae Yersinia phage phiR201 TP-J34 (HE956708) 36686 36601 - Leu TAA [ENA] ¡û
Identical group No.179822 (1 seq.)
>PHG181008240 MH370386 Siphoviridae Salmonella phage S147 (MH370386) 71327 71412 + Leu TAA [ENA] ¡û
Identical group No.208228 (1 seq.)
>PHG181001388 KT070867 Siphoviridae Bacillus phage PBC2 (KT070867) 150549 150465 - Leu TAA [ENA] ¡û
Identical group No.243404 (14 seq.)
>WENV180114887 OAPS01063267 [OAPS] marine metagenome; sea water 246 322 + Leu TAA [ENA] ¢þ
>WENV180363598 OBNY01131092 [OBNY] marine metagenome; ENVO:00002010 230 306 + Leu TAA [ENA] ¢þ
>WENV180363686 OBNZ01000193 [OBNZ] marine metagenome; ENVO:00002010 1721 1645 - Leu TAA [ENA] ¢þ
>WENV182560432 OJDU01000985 [OJDU] seawater metagenome; Sea water 958 882 - Leu TAA [ENA] ¢þ
>WENV183055519 OLHD01000351 [OLHD] seawater metagenome; Sea water 2982 2906 - Leu TAA [ENA] ¢þ
>WENV183059960 OLHW01000876 [OLHW] seawater metagenome; Sea water 962 886 - Leu TAA [ENA] ¢þ
>WENV183700594 PDMW01055039 [PDMW] marine metagenome; viruses from water sample; < 0.22 micron filtered, nuclease treated, low buoyant density 403 329 - Leu TAA [ENA] ¢þ
>WENV170131463 CENS01069021 [CENS] marine metagenome genome assembly TARA_022_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 350 426 + Leu TAA [ENA] ¢þ
>WENV170601595 FUWD010181864 [FUWD] metagenome; unknown 165 89 - Leu TAA [ENA] ¢þ
>WENV170604378 FUWD010391023 [FUWD] metagenome; unknown 552 628 + Leu TAA [ENA] ¢þ
>WENV002175 AACY020060423 Marine microbial communities from Global Ocean Sampling (GOS) 369 448 + Leu TAA [ENA]
>PHG14100714 HQ633071 Siphoviridae Synechococcus phage S-SKS1 jenny 12G5 (HQ633071) 178293 178217 - Leu TAA [ENA] ¡û
>WENV000221 AACY020006842 Marine microbial communities from Global Ocean Sampling (GOS) 1309 1388 + Leu TAA [ENA]
>WENV000526 AACY020015485 Marine microbial communities from Global Ocean Sampling (GOS) 813 734 - Leu TAA [ENA]
Identical group No.247545 (4 seq.)
>WENV182395128 OIEK01000768 [OIEK] human gut metagenome; human gut 980 903 - Leu TAA [ENA] ¢þ
>WENV182951452 OKVU01000552 [OKVU] human gut metagenome; human gut 648 725 + Leu TAA [ENA] ¢þ
>WENV182953278 OKVY01000028 [OKVY] human gut metagenome; human gut 21094 21017 - Leu TAA [ENA] ¢þ
>PHG181006800 MG459987 Siphoviridae Klebsiella phage Sugarland (MG459987) 32109 32032 - Leu TAA [ENA] ¡û
Identical group No.297333 (39 seq.)
>WENV183355968 OLXE01000031 [OLXE] human gut metagenome; feces 59399 59475 + Leu TAA [ENA] ¢þ
>WENV183468333 OMEF01011306 [OMEF] human gut metagenome; feces 200 124 - Leu TAA [ENA] ¢þ
>WENV170559958 CYGL01000004 [CYGL] human gut metagenome; 26380 26304 - Leu TAA [ENA] ¢þ
>WENV170560278 CYGL01000398 [CYGL] human gut metagenome; 15867 15791 - Leu TAA [ENA] ¢þ
>PHG0100102 AJ604531 Siphoviridae Salmonella phage 5 K-12 (AJ604531) 8903 8827 - Leu TAA [ENA] ¡û
>PHG0100362 CP000917 Siphoviridae Escherichia virus EPS7 phi812b (CP000917) 38262 38186 - Leu TAA [ENA] ¡û
>PHG181002404 KU927497 Siphoviridae Salmonella phage 100268_sal2 (KU927497) 38325 38249 - Leu TAA [ENA] ¡û
>PHG181002495 KX017521 Siphoviridae Salmonella phage 118970_sal2 (KX017521) 37436 37360 - Leu TAA [ENA] ¡û
>PHG181003789 KY114934 Siphoviridae Salmonella phage SP01 (KY114934) 82986 83062 + Leu TAA [ENA] ¡û
>PHG181004313 KY677846 Siphoviridae Escherichia phage phiLLS (KY677846) 48133 48209 + Leu TAA [ENA] ¡û
>PHG181004365 KY787212 Siphoviridae Salmonella phage BSP22A (KY787212) 37871 37795 - Leu TAA [ENA] ¡û
>PHG181004450 KY963424 Siphoviridae Shigella phage SSP1 (KY963424) 105265 105341 + Leu TAA [ENA] ¡û
>PHG181004656 LN887948 Siphoviridae Escherichia phage slur09 (LN887948) 97431 97507 + Leu TAA [ENA] ¡û
>PHG181004843 MF001363 Siphoviridae Salmonella phage SH9 (MF001363) 84038 84114 + Leu TAA [ENA] ¡û
>PHG181005576 MF402939 Siphoviridae Escherichia phage OSYSP (MF402939) 9367 9291 - Leu TAA [ENA] ¡û
>PHG181005627 MF431730 Siphoviridae Bacteriophage T5-like chee24 (MF431730) 36812 36736 - Leu TAA [ENA] ¡û
>PHG181005646 MF431731 Siphoviridae Bacteriophage T5-like pork27 (MF431731) 36811 36735 - Leu TAA [ENA] ¡û
>PHG181005665 MF431732 Siphoviridae Bacteriophage T5-like pork29 (MF431732) 36812 36736 - Leu TAA [ENA] ¡û
>PHG181005684 MF431733 Siphoviridae Bacteriophage T5-like saus47N (MF431733) 36812 36736 - Leu TAA [ENA] ¡û
>PHG181005703 MF431734 Siphoviridae Bacteriophage T5-like saus111K (MF431734) 36812 36736 - Leu TAA [ENA] ¡û
>PHG181005722 MF431735 Siphoviridae Bacteriophage T5-like poul124 (MF431735) 36821 36745 - Leu TAA [ENA] ¡û
>PHG181005741 MF431736 Siphoviridae Bacteriophage T5-like chee130_1 (MF431736) 37679 37603 - Leu TAA [ENA] ¡û
>PHG181005764 MF431737 Siphoviridae Bacteriophage T5-like saus132 (MF431737) 37679 37603 - Leu TAA [ENA] ¡û
>PHG181005787 MF431738 Siphoviridae Bacteriophage T5-like poul149 (MF431738) 37679 37603 - Leu TAA [ENA] ¡û
>PHG181005810 MF431739 Siphoviridae Bacteriophage T5-like chee158 (MF431739) 37679 37603 - Leu TAA [ENA] ¡û
>PHG181005833 MF431740 Siphoviridae Bacteriophage T5-like cott162 (MF431740) 37679 37603 - Leu TAA [ENA] ¡û
>PHG181005856 MF431741 Siphoviridae Bacteriophage T5-like saus176N (MF431741) 37679 37603 - Leu TAA [ENA] ¡û
>PHG181006030 MF681663 Siphoviridae Salmonella phage LVR16A (MF681663) 49104 49028 - Leu TAA [ENA] ¡û
>PHG181006447 MG065642 Siphoviridae Campylobacter phage A148 (MG065642) 6829 6905 + Leu TAA [ENA] ¡û
>PHG181006625 MG065692 Siphoviridae Campylobacter phage C13 (MG065692) 14693 14617 - Leu TAA [ENA] ¡û
>PHG181007758 MH102285 Siphoviridae Salmonella phage vB_SenS_PHB06 (MH102285) 67185 67261 + Leu TAA [ENA] ¡û
>PHG181008035 MH370366 Siphoviridae Salmonella phage S113 (MH370366) 71623 71699 + Leu TAA [ENA] ¡û
>PHG181008084 MH370369 Siphoviridae Salmonella phage S116 (MH370369) 69769 69845 + Leu TAA [ENA] ¡û
>PHG181008154 MH370377 Siphoviridae Salmonella phage S130 (MH370377) 70519 70595 + Leu TAA [ENA] ¡û
>PHG181008173 MH370378 Siphoviridae Salmonella phage S131 (MH370378) 70519 70595 + Leu TAA [ENA] ¡û
>PHG181008192 MH370379 Siphoviridae Salmonella phage S132 (MH370379) 76104 76180 + Leu TAA [ENA] ¡û
>PHG14100772 HQ665011 Siphoviridae Escherichia virus AKFV33 EcoS-CEV2 (HQ665011) 35502 35426 - Leu TAA [ENA] ¡û
>PHG14102789 KJ190157 Siphoviridae Escherichia phage vB_EcoS_FFH1 TahiMoana (KJ190157) 35314 35238 - Leu TAA [ENA] ¡û
>PHG14103101 KM236244 Siphoviridae Salmonella virus Stitch LIKBL0011 (KM236244) 36807 36731 - Leu TAA [ENA] ¡û
Identical group No.318960 (1 seq.)
>PHG181007172 MG676225 Siphoviridae Aeromonas phage AhSzw-1 (MG676225) 65559 65635 + Leu TAA [ENA] ¡û
Identical group No.335778 (1 seq.)
>PHG181006364 MF979564 Siphoviridae Pectobacterium phage DU_PP_V (MF979564) 32697 32621 - Leu TAA [ENA] ¡û
Identical group No.335781 (1 seq.)
>PHG181006415 MG030347 Siphoviridae Proteus phage PM135 (MG030347) 69735 69811 + Leu TAA [ENA] ¡û
Identical group No.337462 (1 seq.)
>PHG14101895 JX195166 Siphoviridae Pectobacterium phage My1 (JX195166) 31794 31718 - Leu TAA [ENA] ¡û
Identical group No.379882 (1 seq.)
>PHG181003948 KY363465 Siphoviridae Providencia phage vB_PreS_PR1 (KY363465) 32148 32072 - Leu TAA [ENA] ¡û
Identical group No.388358 (2 seq.)
>PHG181008480 MH576964 Siphoviridae Streptomyces phage Starbow (MH576964) 76852 76926 + Leu TAA [ENA] ¡û
>PHG181008664 MH590599 Siphoviridae Streptomyces phage Karimac (MH590599) 77114 77188 + Leu TAA [ENA] ¡û
Identical group No.397531 (1 seq.)
>PHG181007412 MG962370 Siphoviridae Mycobacterium phage Kykar (MG962370) 22868 22794 - Leu TAA [ENA] ¡û
Identical group No.406232 (2 seq.)
>PHG181008057 MH370367 Siphoviridae Salmonella phage S114 (MH370367) 69832 69908 + Leu TAA [ENA] ¡û
>PHG181008213 MH370380 Siphoviridae Salmonella phage S133 (MH370380) 69832 69908 + Leu TAA [ENA] ¡û
Identical group No.611203 (1 seq.)
>PHG181006022 MF668286 Siphoviridae Rhodococcus phage Trina (MF668286) 103131 103204 + Leu TAA [ENA] ¡û
Identical group No.652646 (1 seq.)
>PHG181008575 MH576968 Siphoviridae Streptomyces phage Wofford (MH576968) 108076 108149 + Leu TAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK