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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Soil microbial communities from Minnesota Farm
Anticodon = CGC
HIT:
13 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.360445 (1 seq.)
>WENV077418
AAFX01035103
Soil microbial communities from Minnesota Farm
101
179
+
Ala
CGC
[ENA]
Identical group No.360455 (1 seq.)
>WENV077519
AAFX01052113
Soil microbial communities from Minnesota Farm
740
662
-
Ala
CGC
[ENA]
Identical group No.454489 (319 seq.)
>W1710785718
LJIC01000074
Alphaproteobacteria
Rhodopseudomonas sp. AAP120 [LJIC]
30946
31021
+
Ala
CGC
[ENA]
¡û
>W1710802951
LJYE01000115
Alphaproteobacteria
Bradyrhizobium pachyrhizi [LJYE]
44347
44422
+
Ala
CGC
[ENA]
¡û
>W1710802957
LJYF01000002
Alphaproteobacteria
Bradyrhizobium yuanmingense [LJYF]
117368
117293
-
Ala
CGC
[ENA]
¡û
>W1710803002
LJYG01000004
Alphaproteobacteria
Bradyrhizobium manausense [LJYG]
29534
29609
+
Ala
CGC
[ENA]
¡û
>W1710854956
LLXX01000224
Alphaproteobacteria
Bradyrhizobium valentinum [LLXX]
18980
18905
-
Ala
CGC
[ENA]
¡û
>W1710855002
LLXY01000198
Alphaproteobacteria
Bradyrhizobium valentinum [LLXY]
14613
14688
+
Ala
CGC
[ENA]
¡û
>W1710855040
LLXZ01000054
Alphaproteobacteria
Bradyrhizobium jicamae [LLXZ]
56328
56253
-
Ala
CGC
[ENA]
¡û
>W1710855091
LLYA01000068
Alphaproteobacteria
Bradyrhizobium retamae [LLYA]
101250
101325
+
Ala
CGC
[ENA]
¡û
>W1710855093
LLYA01000068
Alphaproteobacteria
Bradyrhizobium retamae [LLYA]
35809
35734
-
Ala
CGC
[ENA]
¡û
>W1710855183
LLYB01000123
Alphaproteobacteria
Bradyrhizobium lablabi [LLYB]
250462
250387
-
Ala
CGC
[ENA]
¡û
>W1710861443
LMDP01000003
Alphaproteobacteria
Afipia sp. Root123D2 [LMDP]
848594
848519
-
Ala
CGC
[ENA]
¡û
>W1710864254
LMFS01000003
Alphaproteobacteria
Pseudolabrys sp. Root1462 [LMFS]
351843
351768
-
Ala
CGC
[ENA]
¡û
>W1710877755
LMQJ01000056
Alphaproteobacteria
Bradyrhizobium sp. Leaf396 [LMQJ]
143569
143644
+
Ala
CGC
[ENA]
¡û
>W1710891433
LNCU01000120
Alphaproteobacteria
Bradyrhizobium macuxiense BR 10303 [LNCU]
206698
206623
-
Ala
CGC
[ENA]
¡û
>W1710892426
LNDS01000041
Alphaproteobacteria
Rhizobiales bacterium Ga0077525 [LNDS]
41166
41241
+
Ala
CGC
[ENA]
¡û
>W1710892785
LNEC01000019
Alphaproteobacteria
Bradyrhizobiaceae bacterium Ga0074131 [LNEC]
282263
282188
-
Ala
CGC
[ENA]
¡û
>W1711067398
LSEF01000050
Alphaproteobacteria
Bradyrhizobium neotropicale [LSEF]
26744
26819
+
Ala
CGC
[ENA]
¡û
>W1711072987
LSIC01000073
Alphaproteobacteria
Bradyrhizobium sp. CCH5-F6 [LSIC]
243207
243132
-
Ala
CGC
[ENA]
¡û
>W1711073385
LSIM01000190
Alphaproteobacteria
Bradyrhizobium sp. CCH4-A6 [LSIM]
22474
22549
+
Ala
CGC
[ENA]
¡û
>W1711073433
LSIN01000236
Alphaproteobacteria
Bradyrhizobium sp. CCH10-C7 [LSIN]
104140
104065
-
Ala
CGC
[ENA]
¡û
>W1711124800
LUKO01000160
Alphaproteobacteria
Bradyrhizobium liaoningense [LUKO]
508062
507987
-
Ala
CGC
[ENA]
¡û
>W1711129638
LUUB01000129
Alphaproteobacteria
Bradyrhizobium centrolobii BR 10245 [LUUB]
60072
59997
-
Ala
CGC
[ENA]
¡û
>W1711138876
LVEM01000002
Alphaproteobacteria
Bradyrhizobium stylosanthis [LVEM]
176717
176792
+
Ala
CGC
[ENA]
¡û
>W1711169206
LVYV01000054
Alphaproteobacteria
Tardiphaga robiniae [LVYV]
242445
242370
-
Ala
CGC
[ENA]
¡û
>W1711180096
LWIG01000001
Alphaproteobacteria
Bradyrhizobium sacchari BR10280 [LWIG]
930809
930734
-
Ala
CGC
[ENA]
¡û
>W1711193144
LWUI01000014
Alphaproteobacteria
Bradyrhizobium elkanii [LWUI]
24357
24282
-
Ala
CGC
[ENA]
¡û
>W1711206724
LXEM01000007
Alphaproteobacteria
Bradyrhizobium elkanii [LXEM]
190032
190107
+
Ala
CGC
[ENA]
¡û
>W1711317182
MAXB01000065
Alphaproteobacteria
Bradyrhizobium paxllaeri [MAXB]
32669
32744
+
Ala
CGC
[ENA]
¡û
>W1711317219
MAXC01000023
Alphaproteobacteria
Bradyrhizobium sp. LMTR 3 [MAXC]
25357
25432
+
Ala
CGC
[ENA]
¡û
>W1711487059
MKFI01000005
Alphaproteobacteria
Bradyrhizobium mercantei SEMIA 6399 [MKFI]
56525
56600
+
Ala
CGC
[ENA]
¡û
>W1711501129
MKRG01000018
Alphaproteobacteria
Afipia sp. 62-7 [MKRG]
16611
16536
-
Ala
CGC
[ENA]
¡û
>W1711501373
MKRN01000188
Alphaproteobacteria
Nitrobacter sp. 62-13 [MKRN]
4352
4427
+
Ala
CGC
[ENA]
¡û
>W1711502258
MKSM01000105
Alphaproteobacteria
Nitrobacter sp. 62-23 [MKSM]
1241
1316
+
Ala
CGC
[ENA]
¡û
>W1711504258
MKUJ01000014
Alphaproteobacteria
Afipia sp. 64-13 [MKUJ]
81845
81920
+
Ala
CGC
[ENA]
¡û
>W1711505855
MKVX01000002
Alphaproteobacteria
Rhizobiales bacterium 62-47 [MKVX]
464141
464216
+
Ala
CGC
[ENA]
¡û
>W1711505997
MKWA01000005
Alphaproteobacteria
Rhizobiales bacterium 64-17 [MKWA]
133070
133145
+
Ala
CGC
[ENA]
¡û
>W1711612985
MOXO01000057
Alphaproteobacteria
Bradyrhizobium elkanii [MOXO]
7264
7189
-
Ala
CGC
[ENA]
¡û
>W1711636763
MPVQ01000094
Alphaproteobacteria
Bradyrhizobium brasilense UFLA 03-321 [MPVQ]
36785
36860
+
Ala
CGC
[ENA]
¡û
>W1711795353
MWPQ01000009
Alphaproteobacteria
Nitrobacter vulgaris [MWPQ]
10222
10147
-
Ala
CGC
[ENA]
¡û
>W1711928277
NAEX01000146
Alphaproteobacteria
Bradyrhizobium canariense [NAEX]
29418
29493
+
Ala
CGC
[ENA]
¡û
>W1711928323
NAEY01000121
Alphaproteobacteria
Bradyrhizobium canariense [NAEY]
15271
15196
-
Ala
CGC
[ENA]
¡û
>W1711928369
NAEZ01000129
Alphaproteobacteria
Bradyrhizobium canariense [NAEZ]
15271
15196
-
Ala
CGC
[ENA]
¡û
>W1711928413
NAFA01000158
Alphaproteobacteria
Bradyrhizobium canariense [NAFA]
15271
15196
-
Ala
CGC
[ENA]
¡û
>W1711928464
NAFB01000128
Alphaproteobacteria
Bradyrhizobium canariense [NAFB]
28785
28860
+
Ala
CGC
[ENA]
¡û
>W1711928530
NAFC01000167
Alphaproteobacteria
Bradyrhizobium canariense [NAFC]
192659
192584
-
Ala
CGC
[ENA]
¡û
>W1711928570
NAFD01000180
Alphaproteobacteria
Bradyrhizobium canariense [NAFD]
28698
28773
+
Ala
CGC
[ENA]
¡û
>W1711928616
NAFE01000213
Alphaproteobacteria
Bradyrhizobium canariense [NAFE]
149161
149086
-
Ala
CGC
[ENA]
¡û
>W1711928666
NAFF01000099
Alphaproteobacteria
Bradyrhizobium canariense [NAFF]
125000
124925
-
Ala
CGC
[ENA]
¡û
>W1711928712
NAFG01000166
Alphaproteobacteria
Bradyrhizobium canariense [NAFG]
124923
124848
-
Ala
CGC
[ENA]
¡û
>W1711928759
NAFH01000163
Alphaproteobacteria
Bradyrhizobium canariense [NAFH]
149162
149087
-
Ala
CGC
[ENA]
¡û
>W1711928810
NAFI01000172
Alphaproteobacteria
Bradyrhizobium canariense [NAFI]
124961
124886
-
Ala
CGC
[ENA]
¡û
>W1711928865
NAFJ01000148
Alphaproteobacteria
Bradyrhizobium canariense [NAFJ]
124660
124585
-
Ala
CGC
[ENA]
¡û
>W1711928904
NAFK01000163
Alphaproteobacteria
Bradyrhizobium canariense [NAFK]
28699
28774
+
Ala
CGC
[ENA]
¡û
>W1711928960
NAFL01000270
Alphaproteobacteria
Bradyrhizobium japonicum [NAFL]
75642
75717
+
Ala
CGC
[ENA]
¡û
>W1712049597
NFUH01000111
Alphaproteobacteria
Bradyrhizobium guangdongense [NFUH]
12042
11967
-
Ala
CGC
[ENA]
¡û
>C171021087
CP013127
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 122 [CP013127]
598686
598761
+
Ala
CGC
-
¡û
>C171064658
CP017637
Alphaproteobacteria
Bradyrhizobium japonicum J5 [CP017637]
549233
549308
+
Ala
CGC
-
¡û
>C171115948
CP021112
Alphaproteobacteria
Pseudorhodoplanes sinuspersici RIPI110 [CP021112]
1768012
1767937
-
Ala
CGC
-
¡û
>C171131946
LT859959
Alphaproteobacteria
Bradyrhizobium sp. ORS 285 [LT859959]
7570509
7570584
+
Ala
CGC
-
¡û
>W131164092
ARAG01000005
Alphaproteobacteria
Bradyrhizobium elkanii USDA 76 [ARAG]
26273
26198
-
Ala
CGC
[ENA]
¡û
>W131164973
ARBF01000063
Alphaproteobacteria
Bradyrhizobium sp. WSM2793 WSM2793 [ARBF]
139919
139994
+
Ala
CGC
[ENA]
¡û
>W131167469
ARDH01000008
Alphaproteobacteria
Bradyrhizobium sp. WSM4349 WSM4349 [ARDH]
172878
172803
-
Ala
CGC
[ENA]
¡û
>W131170255
ARFJ01000027
Alphaproteobacteria
Bradyrhizobium japonicum USDA 124 [ARFJ]
41371
41296
-
Ala
CGC
[ENA]
¡û
>W131217304
ATWP01000003
Alphaproteobacteria
Bradyrhizobium japonicum is5 [ATWP]
357463
357388
-
Ala
CGC
[ENA]
¡û
>W131226898
AUES01000020
Alphaproteobacteria
Bradyrhizobium sp. URHA0002 [AUES]
38784
38709
-
Ala
CGC
[ENA]
¡û
>W131227298
AUFA01000038
Alphaproteobacteria
Bradyrhizobium sp. Cp5.3 [AUFA]
12881
12806
-
Ala
CGC
[ENA]
¡û
>W131228551
AUGA01000018
Alphaproteobacteria
Bradyrhizobium sp. th.b2 [AUGA]
17912
17837
-
Ala
CGC
[ENA]
¡û
>W131228675
AUGD01000003
Alphaproteobacteria
Bradyrhizobium japonicum in8p8 [AUGD]
157712
157787
+
Ala
CGC
[ENA]
¡û
>C003045
BA000040
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 110 USDA110 [BA000040]
591251
591326
+
Ala
CGC
[Ensembl]
¡û
>C014955
CP000319
Alphaproteobacteria
Nitrobacter hamburgensis X14 [CP000319]
668290
668215
-
Ala
CGC
[Ensembl]
¡û
>C015386
CP000115
Alphaproteobacteria
Nitrobacter winogradskyi Nb-255 [CP000115]
535420
535345
-
Ala
CGC
[Ensembl]
¡û
>C018831
CP000463
Alphaproteobacteria
Rhodopseudomonas palustris [CP000463]
53344
53419
+
Ala
CGC
[Ensembl]
¡û
>C018926
CP000301
Alphaproteobacteria
Rhodopseudomonas palustris [CP000301]
65372
65297
-
Ala
CGC
[Ensembl]
¡û
>C018966
CP000283
Alphaproteobacteria
Rhodopseudomonas palustris BisB5 [CP000283]
776886
776811
-
Ala
CGC
[Ensembl]
¡û
>C019023
CP000250
Alphaproteobacteria
Rhodopseudomonas palustris HaA2 [CP000250]
121051
121126
+
Ala
CGC
[Ensembl]
¡û
>w012969
AAMY01000001
Alphaproteobacteria
Nitrobacter sp. Nb-311A [AAMY]
272486
272561
+
Ala
CGC
[ENA]
¡û
>W141001322
ADOU01000118
Alphaproteobacteria
Bradyrhizobium diazoefficiens SEMIA 5080 [ADOU]
18159
18084
-
Ala
CGC
[ENA]
¡û
>WENV180032089
FTJU01080905
[FTJU] metagenome; soil
170
245
+
Ala
CGC
[ENA]
¢þ
>W141007465
AGWX01000005
Alphaproteobacteria
Afipia broomeae ATCC 49717 [AGWX]
805209
805134
-
Ala
CGC
[ENA]
¡û
>W141007502
AGWY01000012
Alphaproteobacteria
Afipia clevelandensis ATCC 49720 [AGWY]
458492
458417
-
Ala
CGC
[ENA]
¡û
>W141007550
AGWZ01000001
Alphaproteobacteria
Afipia felis ATCC 53690 [AGWZ]
2990248
2990173
-
Ala
CGC
[ENA]
¡û
>WENV180099514
NMRC01010529
[NMRC] plant metagenome; fluid collected inside the plant's pitcher
301
226
-
Ala
CGC
[ENA]
¢þ
>WENV180265087
OBEQ011629402
[OBEQ] groundwater metagenome; groundwater
994
919
-
Ala
CGC
[ENA]
¢þ
>WENV180266504
OBEQ011761686
[OBEQ] groundwater metagenome; groundwater
103
28
-
Ala
CGC
[ENA]
¢þ
>WENV180292295
OBIV01385861
[OBIV] soil metagenome; Clay
99
24
-
Ala
CGC
[ENA]
¢þ
>WENV180298980
OBJA01851251
[OBJA] soil metagenome; sediment, water from around vicinity
2
77
+
Ala
CGC
[ENA]
¢þ
>WENV180320405
OBKO01004315
[OBKO] soil metagenome; Alaskan Permafrost
186
261
+
Ala
CGC
[ENA]
¢þ
>WENV180397976
OBPZ01038240
[OBPZ] marine metagenome; ENVO:00002010
267
342
+
Ala
CGC
[ENA]
¢þ
>W141041829
AMCQ01000046
Alphaproteobacteria
Bradyrhizobium sp. CCGE-LA001 [AMCQ]
6125
6200
+
Ala
CGC
[ENA]
¡û
>W141043061
AMFB01000028
Alphaproteobacteria
Bradyrhizobium sp. DFCI-1 [AMFB]
100866
100791
-
Ala
CGC
[ENA]
¡û
>WENV180635814
OCRE01011019
[OCRE] marine metagenome; Seawater
313
388
+
Ala
CGC
[ENA]
¢þ
>W141063414
APHQ01000016
Alphaproteobacteria
Afipia sp. OHSU_II-uncloned [APHQ]
274148
274073
-
Ala
CGC
[ENA]
¡û
>W141063662
APJD01000019
Alphaproteobacteria
Bradyrhizobium sp. OHSU_III [APJD]
115285
115210
-
Ala
CGC
[ENA]
¡û
>W141063711
APJE01000014
Alphaproteobacteria
Afipia sp. OHSU_I-C6 [APJE]
9093
9168
+
Ala
CGC
[ENA]
¡û
>W141063750
APJF01000006
Alphaproteobacteria
Afipia sp. OHSU_I-C4 [APJF]
9093
9168
+
Ala
CGC
[ENA]
¡û
>W141063801
APJG01000012
Alphaproteobacteria
Afipia sp. OHSU_I-uncloned [APJG]
247071
246996
-
Ala
CGC
[ENA]
¡û
>W141063846
APJH01000009
Alphaproteobacteria
Afipia sp. OHSU_II-C2 [APJH]
247067
246992
-
Ala
CGC
[ENA]
¡û
>W141063895
APJI01000010
Alphaproteobacteria
Afipia sp. OHSU_II-C1 [APJI]
247067
246992
-
Ala
CGC
[ENA]
¡û
>W08007818
ABKN01000001
Alphaproteobacteria
Afipia carboxidovorans OM5 [ABKN]
299393
299468
+
Ala
CGC
[ENA]
¡û
>W141093593
AVBK01000009
Alphaproteobacteria
Afipia sp. NBIMC_P1-C1 [AVBK]
159623
159698
+
Ala
CGC
[ENA]
¡û
>W141093659
AVBL01000018
Alphaproteobacteria
Afipia sp. NBIMC_P1-C2 [AVBL]
233586
233511
-
Ala
CGC
[ENA]
¡û
>W141093709
AVBM01000021
Alphaproteobacteria
Afipia sp. NBIMC_P1-C3 [AVBM]
127289
127214
-
Ala
CGC
[ENA]
¡û
>WENV181165949
OEIS01317242
[OEIS] soil metagenome; soil
121
196
+
Ala
CGC
[ENA]
¢þ
>WENV181166630
OEIU01000850
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
20654
20729
+
Ala
CGC
[ENA]
¢þ
>WENV181167222
OEIU01014718
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
1009
1084
+
Ala
CGC
[ENA]
¢þ
>WENV181167801
OEIU01077953
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
756
831
+
Ala
CGC
[ENA]
¢þ
>WENV181307925
OFIS01000040
[OFIS] sludge metagenome; sludge
7098
7173
+
Ala
CGC
[ENA]
¢þ
>WENV181308548
OFIS01075544
[OFIS] sludge metagenome; sludge
368
293
-
Ala
CGC
[ENA]
¢þ
>WENV181312079
OFJB01039677
[OFJB] sludge metagenome; sludge
455
380
-
Ala
CGC
[ENA]
¢þ
>WENV181384739
OFRI01007991
[OFRI] wastewater metagenome; Exp Tend VB 90WW
989
914
-
Ala
CGC
[ENA]
¢þ
>WENV181386018
OFRL01000343
[OFRL] wastewater metagenome; Lake Maggiore Cannobio
16087
16012
-
Ala
CGC
[ENA]
¢þ
>WENV181399910
OFSF01000239
[OFSF] wastewater metagenome; Exp Tend VB 100WW
15564
15489
-
Ala
CGC
[ENA]
¢þ
>WENV181401720
OFTX01003904
[OFTX] sludge metagenome; sludge
2144
2069
-
Ala
CGC
[ENA]
¢þ
>WENV181402505
OFTY01002886
[OFTY] sludge metagenome; sludge
3535
3610
+
Ala
CGC
[ENA]
¢þ
>W141150038
AXAB01000013
Alphaproteobacteria
Bradyrhizobium sp. WSM2254 [AXAB]
176397
176322
-
Ala
CGC
[ENA]
¡û
>W141150138
AXAD01000008
Alphaproteobacteria
Bradyrhizobium arachidis USDA 3384 [AXAD]
209424
209349
-
Ala
CGC
[ENA]
¡û
>W141150212
AXAF01000003
Alphaproteobacteria
Bradyrhizobium ottawaense USDA 4 [AXAF]
156535
156610
+
Ala
CGC
[ENA]
¡û
>W141150280
AXAG01000017
Alphaproteobacteria
Bradyrhizobium japonicum USDA 38 [AXAG]
169742
169817
+
Ala
CGC
[ENA]
¡û
>W141150343
AXAH01000040
Alphaproteobacteria
Bradyrhizobium elkanii USDA 3254 [AXAH]
28746
28671
-
Ala
CGC
[ENA]
¡û
>W141150996
AXAS01000015
Alphaproteobacteria
Bradyrhizobium sp. Ec3.3 [AXAS]
31063
30988
-
Ala
CGC
[ENA]
¡û
>W141151038
AXAT01000011
Alphaproteobacteria
Bradyrhizobium japonicum USDA 135 [AXAT]
62456
62381
-
Ala
CGC
[ENA]
¡û
>W141151106
AXAU01000008
Alphaproteobacteria
Bradyrhizobium murdochi WSM1741 [AXAU]
150579
150504
-
Ala
CGC
[ENA]
¡û
>W141151125
AXAV01000007
Alphaproteobacteria
Bradyrhizobium japonicum USDA 6 [AXAV]
176453
176528
+
Ala
CGC
[ENA]
¡û
>W141151209
AXAW01000039
Alphaproteobacteria
Bradyrhizobium elkanii USDA 3259 [AXAW]
34875
34950
+
Ala
CGC
[ENA]
¡û
>W141151249
AXAX01000018
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 122 [AXAX]
21037
21112
+
Ala
CGC
[ENA]
¡û
>W141151298
AXAY01000021
Alphaproteobacteria
Bradyrhizobium sp. WSM3983 [AXAY]
19541
19466
-
Ala
CGC
[ENA]
¡û
>W141151318
AXAZ01000014
Alphaproteobacteria
Bradyrhizobium sp. WSM1743 [AXAZ]
142443
142518
+
Ala
CGC
[ENA]
¡û
>W141151487
AXBC01000008
Alphaproteobacteria
Bradyrhizobium genosp. SA-4 SA-4 str. CB756 [AXBC]
165471
165546
+
Ala
CGC
[ENA]
¡û
>W141168812
AXVG01000002
Alphaproteobacteria
Bradyrhizobium japonicum 22 [AXVG]
79543
79618
+
Ala
CGC
[ENA]
¡û
>W141169219
AXVP01000120
Alphaproteobacteria
Bradyrhizobium japonicum USDA 123 [AXVP]
22879
22954
+
Ala
CGC
[ENA]
¡û
>W141194165
AYSU01000029
Alphaproteobacteria
Rhodopseudomonas palustris JSC-3b [AYSU]
35414
35339
-
Ala
CGC
[ENA]
¡û
>W141220399
AZXU01000001
Alphaproteobacteria
Bradyrhizobium sp. WSM1417 [AZXU]
1081514
1081439
-
Ala
CGC
[ENA]
¡û
>W141233869
BAWE01000002
Alphaproteobacteria
Bradyrhizobium sp. DOA9 [BAWE]
1390960
1390885
-
Ala
CGC
[ENA]
¡û
>W141243613
CAJQ02000031
Alphaproteobacteria
Afipia birgiae 34632 [CAJQ]
15924
15849
-
Ala
CGC
[ENA]
¡û
>W141261741
CCAZ010000268
Alphaproteobacteria
Afipia felis [CCAZ]
12919
12844
-
Ala
CGC
[ENA]
¡û
>W141275936
JADK01000003
Alphaproteobacteria
Bradyrhizobium sp. URHA0013 [JADK]
1411378
1411303
-
Ala
CGC
[ENA]
¡û
>W141278136
JAFC01000067
Alphaproteobacteria
Bradyrhizobium elkanii USDA 94 [JAFC]
25014
25089
+
Ala
CGC
[ENA]
¡û
>WENV183670105
ORJL010908578
[ORJL] groundwater metagenome; groundwater
349
424
+
Ala
CGC
[ENA]
¢þ
>WENV183674881
ORJL011442817
[ORJL] groundwater metagenome; groundwater
1904
1979
+
Ala
CGC
[ENA]
¢þ
>WENV183688672
ORMF011323199
[ORMF] groundwater metagenome; groundwater
508
433
-
Ala
CGC
[ENA]
¢þ
>WENV183712388
PDWI01098285
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
820
895
+
Ala
CGC
[ENA]
¢þ
>WENV183724145
PJQE01000372
[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
2523
2598
+
Ala
CGC
[ENA]
¢þ
>WENV170002471
AGTN01040859
[AGTN] bioreactor metagenome; poplar biomass
348
273
-
Ala
CGC
[ENA]
¢þ
>WENV170003500
AGTN01359637
[AGTN] bioreactor metagenome; poplar biomass
267
342
+
Ala
CGC
[ENA]
¢þ
>WENV170017821
BARU01029869
[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
214
289
+
Ala
CGC
[ENA]
¢þ
>WENV170132772
CENT01118661
[CENT] marine metagenome genome assembly TARA_007_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
14
89
+
Ala
CGC
[ENA]
¢þ
>WENV170554417
CXWK01068264
[CXWK] wastewater metagenome; activated sludge
245
170
-
Ala
CGC
[ENA]
¢þ
>WENV170577372
FRDC01004987
[FRDC] freshwater metagenome; water
14880
14955
+
Ala
CGC
[ENA]
¢þ
>WENV170608287
FUWD010913572
[FUWD] metagenome; unknown
598
523
-
Ala
CGC
[ENA]
¢þ
>WENV170706110
LNAP01001170
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
15573
15648
+
Ala
CGC
[ENA]
¢þ
>WENV170706113
LNAP01001183
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
17268
17343
+
Ala
CGC
[ENA]
¢þ
>WENV170706483
LNAP01003451
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
6247
6322
+
Ala
CGC
[ENA]
¢þ
>WENV170706886
LNAP01008309
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
557
482
-
Ala
CGC
[ENA]
¢þ
>WENV170710837
LNFM01002779
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
32943
33018
+
Ala
CGC
[ENA]
¢þ
>WENV170710940
LNFM01003064
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
10522
10597
+
Ala
CGC
[ENA]
¢þ
>WENV170711222
LNFM01004070
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
28380
28305
-
Ala
CGC
[ENA]
¢þ
>WENV170961908
MLJW01006004
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
1298
1223
-
Ala
CGC
[ENA]
¢þ
>C181113205
CP025113
Alphaproteobacteria
Bradyrhizobium sp. SK17 [CP025113]
1436002
1435927
-
Ala
CGC
-
¡û
>C181178170
CP029425
Alphaproteobacteria
Bradyrhizobium ottawaense OO99 [CP029425]
2484024
2483949
-
Ala
CGC
-
¡û
>C181178200
CP029426
Alphaproteobacteria
Bradyrhizobium amphicarpaeae 39S1MB [CP029426]
6959689
6959614
-
Ala
CGC
-
¡û
>C181178246
CP029427
Alphaproteobacteria
Bradyrhizobium symbiodeficiens 85S1MB [CP029427]
6661545
6661470
-
Ala
CGC
-
¡û
>C181181548
CP029603
Alphaproteobacteria
Bradyrhizobium diazoefficiens XF7 [CP029603]
656220
656295
+
Ala
CGC
-
¡û
>C181203880
LS398110
Alphaproteobacteria
Bradyrhizobium vignae [LS398110]
285645
285570
-
Ala
CGC
-
¡û
>C191019698
CP022219
Alphaproteobacteria
Bradyrhizobium guangxiense CCBAU 53363 [CP022219]
6944615
6944540
-
Ala
CGC
-
¡û
>C191019761
CP022221
Alphaproteobacteria
Bradyrhizobium zhanjiangense CCBAU 51778 [CP022221]
490496
490421
-
Ala
CGC
-
¡û
>C191071700
CP030051
Alphaproteobacteria
Bradyrhizobium guangdongense CCBAU 51649 [CP030051]
319327
319252
-
Ala
CGC
-
¡û
>C191071746
CP030053
Alphaproteobacteria
Bradyrhizobium guangzhouense CCBAU 51670 [CP030053]
375846
375771
-
Ala
CGC
-
¡û
>C191092015
CP032617
Alphaproteobacteria
Bradyrhizobium diazoefficiens 110spc4 [CP032617]
521948
522023
+
Ala
CGC
-
¡û
>C191171931
CP039740
Alphaproteobacteria
Pseudolabrys sp. FHR47 [CP039740]
121922
121997
+
Ala
CGC
-
¡û
>C191186650
CP041090
Alphaproteobacteria
Bradyrhizobium symbiodeficiens 65S1MB [CP041090]
5970489
5970414
-
Ala
CGC
-
¡û
>W141730474
JNIJ01000019
Alphaproteobacteria
Bradyrhizobium sp. URHD0069 [JNIJ]
77407
77332
-
Ala
CGC
[ENA]
¡û
>W09102995
AAIS01000002
Alphaproteobacteria
Nitrobacter hamburgensis X14 [AAIS]
289831
289906
+
Ala
CGC
[ENA]
¡û
>W09103818
AAKZ01000004
Alphaproteobacteria
Rhodopseudomonas palustris BisB5 [AAKZ]
166027
166102
+
Ala
CGC
[ENA]
¡û
>W09103858
AALA01000003
Alphaproteobacteria
Rhodopseudomonas palustris BisA53 [AALA]
224703
224628
-
Ala
CGC
[ENA]
¡û
>W09104396
AALQ01000007
Alphaproteobacteria
Rhodopseudomonas palustris HaA2 [AALQ]
5653
5578
-
Ala
CGC
[ENA]
¡û
>W09104431
AALR01000016
Alphaproteobacteria
Rhodopseudomonas palustris BisB18 [AALR]
110439
110364
-
Ala
CGC
[ENA]
¡û
>C09108117
CP001196
Alphaproteobacteria
Afipia carboxidovorans OM5 OM5; ATCC 49405 [CP001196]
299079
299154
+
Ala
CGC
-
¡û
>W1910182824
BJNF01000018
Alphaproteobacteria
Nitrobacter winogradskyi NBRC 14297 [BJNF]
2321
2396
+
Ala
CGC
[ENA]
¡û
>W1910183075
BJNK01000008
Alphaproteobacteria
Bradyrhizobium japonicum NBRC 14783 [BJNK]
15737
15812
+
Ala
CGC
[ENA]
¡û
>W1910183150
BJNL01000094
Alphaproteobacteria
Bradyrhizobium elkanii NBRC 14791 [BJNL]
2138
2063
-
Ala
CGC
[ENA]
¡û
>W1910548971
FZOX01000005
Alphaproteobacteria
Tardiphaga sp. OK246 [FZOX]
232032
232107
+
Ala
CGC
[ENA]
¡û
>W1910568893
JHAA01000011
Alphaproteobacteria
Rhodopseudomonas palustris PSBS [JHAA]
124791
124866
+
Ala
CGC
[ENA]
¡û
>W1910598271
LAXE01000001
Alphaproteobacteria
Bradyrhizobium sp. SUTN9-2 [LAXE]
892536
892461
-
Ala
CGC
[ENA]
¡û
>W1910598945
LBJC01000024
Alphaproteobacteria
Bradyrhizobium nanningense CCBAU 53390 [LBJC]
642519
642444
-
Ala
CGC
[ENA]
¡û
>W1910598993
LBJM01000034
Alphaproteobacteria
Bradyrhizobium zhanjiangense CCBAU 51787 [LBJM]
173999
173924
-
Ala
CGC
[ENA]
¡û
>W1910599053
LBJQ01000088
Alphaproteobacteria
Bradyrhizobium nanningense CCBAU 51757 [LBJQ]
27562
27637
+
Ala
CGC
[ENA]
¡û
>W1910611579
LFJC01000003
Alphaproteobacteria
Bradyrhizobium nitroreducens TSA1 [LFJC]
957098
957023
-
Ala
CGC
[ENA]
¡û
>W1910693447
MDEP01000039
Alphaproteobacteria
Bradyrhizobium sp. UASWS1016 [MDEP]
115337
115262
-
Ala
CGC
[ENA]
¡û
>W1910840257
MZXW01000016
Alphaproteobacteria
Bradyrhizobium betae Opo-243 [MZXW]
161909
161984
+
Ala
CGC
[ENA]
¡û
>W1911245269
NSJY01000006
Alphaproteobacteria
Bradyrhizobium sp. UFLA03-84 [NSJY]
214504
214429
-
Ala
CGC
[ENA]
¡û
>W1911409774
NWTE01000002
Alphaproteobacteria
Bradyrhizobium diazoefficiens Y21 [NWTE]
769528
769453
-
Ala
CGC
[ENA]
¡û
>W1911409817
NWTF01000002
Alphaproteobacteria
Bradyrhizobium ottawaense L2 [NWTF]
8105
8180
+
Ala
CGC
[ENA]
¡û
>W1911409928
NWTG01000037
Alphaproteobacteria
Bradyrhizobium sp. C9 [NWTG]
27508
27583
+
Ala
CGC
[ENA]
¡û
>W1911410003
NWTI01000007
Alphaproteobacteria
Bradyrhizobium sp. Y36 [NWTI]
156616
156541
-
Ala
CGC
[ENA]
¡û
>W1911629608
PSRT01000075
Alphaproteobacteria
Bradyrhizobium genosp. SA-3 SA-3 Rp7b [PSRT]
28109
28184
+
Ala
CGC
[ENA]
¡û
>W1911809208
QYYD01000003
Alphaproteobacteria
Rhodopseudomonas palustris 2.1.18 [QYYD]
186652
186577
-
Ala
CGC
[ENA]
¡û
>W1911817850
QZMV01000003
Alphaproteobacteria
Bradyrhizobium sp. LVM 105 [QZMV]
19224
19299
+
Ala
CGC
[ENA]
¡û
>W1810089278
PGEQ01000001
Alphaproteobacteria
Bradyrhizobium lablabi GAS165 [PGEQ]
5925070
5925145
+
Ala
CGC
[ENA]
¡û
>W1810089630
PGEV01000001
Alphaproteobacteria
Afipia broomeae GAS525 [PGEV]
5700570
5700645
+
Ala
CGC
[ENA]
¡û
>W1810104423
PGVG01000013
Alphaproteobacteria
Bradyrhizobium forestalis INPA54B [PGVG]
30084
30159
+
Ala
CGC
[ENA]
¡û
>W1810289856
PTFE01000009
Alphaproteobacteria
Bradyrhizobium sp. AC87j1 [PTFE]
133185
133110
-
Ala
CGC
[ENA]
¡û
>W1810367881
PVYZ01000016
Alphaproteobacteria
Rhizobium tropici NFR14 [PVYZ]
91988
91913
-
Ala
CGC
[ENA]
¡û
>W1810395546
PYCM01000572
Alphaproteobacteria
Bradyrhizobium algeriense RST89 [PYCM]
209
134
-
Ala
CGC
[ENA]
¡û
>W1810395627
PYCN01000021
Alphaproteobacteria
Bradyrhizobium algeriense RST91 [PYCN]
142479
142554
+
Ala
CGC
[ENA]
¡û
>W1810400110
PYFV01000012
Alphaproteobacteria
Bradyrhizobium sp. MOS004 [PYFV]
120337
120412
+
Ala
CGC
[ENA]
¡û
>W1810400133
PYFW01000001
Alphaproteobacteria
Bradyrhizobium sp. MOS003 [PYFW]
146969
147044
+
Ala
CGC
[ENA]
¡û
>W1810400201
PYFX01000005
Alphaproteobacteria
Bradyrhizobium sp. MOS002 [PYFX]
219714
219789
+
Ala
CGC
[ENA]
¡û
>W1810576939
QENW01000001
Alphaproteobacteria
Tardiphaga sp. OV697 [QENW]
170163
170088
-
Ala
CGC
[ENA]
¡û
>W1810672319
QJTI01000016
Alphaproteobacteria
Rhodopseudomonas faecalis JCM 11668 [QJTI]
12292
12367
+
Ala
CGC
[ENA]
¡û
>W1810784388
QRAQ01000002
Alphaproteobacteria
Tardiphaga sp. CF115 [QRAQ]
979691
979616
-
Ala
CGC
[ENA]
¡û
>W1810789343
QRGO01000001
Alphaproteobacteria
Undibacter mobilis GY_H [QRGO]
1038339
1038414
+
Ala
CGC
[ENA]
¡û
>C151066522
CP010313
Alphaproteobacteria
Bradyrhizobium japonicum E109 [CP010313]
541581
541656
+
Ala
CGC
[Ensembl]
¡û
>W10112831
ADFI01000017
Alphaproteobacteria
Rhodopseudomonas palustris DX-1 [ADFI]
81398
81323
-
Ala
CGC
[ENA]
¡û
>W10119548
ADVZ01000001
Alphaproteobacteria
Afipia sp. 1NLS2 [ADVZ]
1476022
1476097
+
Ala
CGC
[ENA]
¡û
>C11116298
CP002821
Alphaproteobacteria
Afipia carboxidovorans OM4 [CP002821]
229629
229554
-
Ala
CGC
[Ensembl]
¡û
>W1510973732
JGCL01000007
Alphaproteobacteria
Bradyrhizobium japonicum FN1 [JGCL]
30275
30350
+
Ala
CGC
[ENA]
¡û
>W11116058
ADFI01000017
Alphaproteobacteria
Rhodopseudomonas palustris DX-1 [ADFI]
81398
81323
-
Ala
CGC
[ENA]
¡û
>C11118737
CP002418
Alphaproteobacteria
Rhodopseudomonas palustris [CP002418]
288164
288239
+
Ala
CGC
[Ensembl]
¡û
>W1511353624
JRPN01000018
Alphaproteobacteria
Bradyrhizobium japonicum Is-34 [JRPN]
1043109
1043034
-
Ala
CGC
[ENA]
¡û
>W11125814
ADVZ01000001
Alphaproteobacteria
Afipia sp. 1NLS2 [ADVZ]
1476022
1476097
+
Ala
CGC
[ENA]
¡û
>W1511507967
JXOF01000171
Alphaproteobacteria
Bradyrhizobium elkanii UASWS1015 [JXOF]
73558
73633
+
Ala
CGC
[ENA]
¡û
>W1511517264
JXXE01000312
Alphaproteobacteria
Rhodopseudomonas palustris BAL398 [JXXE]
1851
1926
+
Ala
CGC
[ENA]
¡û
>W1511533279
JYMR01000045
Alphaproteobacteria
Bradyrhizobium sp. LTSP849 [JYMR]
154104
154179
+
Ala
CGC
[ENA]
¡û
>W1511533312
JYMS01000027
Alphaproteobacteria
Bradyrhizobium sp. LTSP857 [JYMS]
162442
162517
+
Ala
CGC
[ENA]
¡û
>W1511533362
JYMT01000024
Alphaproteobacteria
Bradyrhizobium sp. LTSP885 [JYMT]
28120
28045
-
Ala
CGC
[ENA]
¡û
>W1511533403
JYMU01000010
Alphaproteobacteria
Bradyrhizobium sp. LTSPM299 [JYMU]
87584
87659
+
Ala
CGC
[ENA]
¡û
>W1511591994
LBIA01000001
Alphaproteobacteria
Afipia massiliensis LC387 [LBIA]
2465945
2465870
-
Ala
CGC
[ENA]
¡û
>W1511625935
LCZM01000109
Alphaproteobacteria
Rhodopseudomonas palustris 42OL [LCZM]
9599
9524
-
Ala
CGC
[ENA]
¡û
>W1511681407
LFIP01000021
Alphaproteobacteria
Bradyrhizobium embrapense SEMIA 6208 [LFIP]
15863
15788
-
Ala
CGC
[ENA]
¡û
>W1511681457
LFIQ01000039
Alphaproteobacteria
Bradyrhizobium pachyrhizi PAC 48 [LFIQ]
472939
472864
-
Ala
CGC
[ENA]
¡û
>W1511706017
LGTB01000052
Alphaproteobacteria
Bradyrhizobium viridifuturi SEMIA 690 [LGTB]
30834
30759
-
Ala
CGC
[ENA]
¡û
>W1511706674
LGUJ01000002
Alphaproteobacteria
Bradyrhizobium diazoefficiens Is-1 [LGUJ]
167113
167188
+
Ala
CGC
[ENA]
¡û
>W11168434
AFOF01000013
Alphaproteobacteria
Bradyrhizobiaceae bacterium SG-6C [AFOF]
142378
142303
-
Ala
CGC
[ENA]
¡û
>C121000452
AP012206
Alphaproteobacteria
Bradyrhizobium japonicum USDA 6 [AP012206]
542411
542486
+
Ala
CGC
[Ensembl]
¡û
>C121000751
AP012279
Alphaproteobacteria
Bradyrhizobium cosmicum S23321 [AP012279]
292333
292258
-
Ala
CGC
[Ensembl]
¡û
>C121003018
CP002826
Alphaproteobacteria
Afipia carboxidovorans OM5 [CP002826]
229630
229555
-
Ala
CGC
-
¡û
>C161001051
AP014685
Alphaproteobacteria
Bradyrhizobium diazoefficiens NK6 [AP014685]
3899043
3898968
-
Ala
CGC
-
¡û
>C161017392
CP007569
Alphaproteobacteria
Bradyrhizobium japonicum SEMIA 5079 [CP007569]
8121909
8121834
-
Ala
CGC
[Ensembl]
¡û
>C161034233
CP011360
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 110 [CP011360]
9016710
9016785
+
Ala
CGC
-
¡û
>C161062553
CP013949
Alphaproteobacteria
Bradyrhizobium sp. CCGE-LA001 [CP013949]
307432
307357
-
Ala
CGC
[Ensembl]
¡û
>C161097200
CP016428
Alphaproteobacteria
Bradyrhizobium icense LMTR 13 [CP016428]
8236927
8237002
+
Ala
CGC
[Ensembl]
¡û
>C161107869
LN901633
Alphaproteobacteria
Bradyrhizobium sp. [LN901633]
311935
311860
-
Ala
CGC
-
¡û
>C161107953
LN907826
Alphaproteobacteria
Bradyrhizobium sp. [LN907826]
865601
865526
-
Ala
CGC
-
¡û
>W121036220
AHLW01000001
Alphaproteobacteria
Bradyrhizobium sp. WSM471 [AHLW]
335302
335227
-
Ala
CGC
[ENA]
¡û
>W121036440
AHMB01000044
Alphaproteobacteria
Bradyrhizobium sp. WSM1253 [AHMB]
13228
13153
-
Ala
CGC
[ENA]
¡û
>W121062469
AJJK01002070
Alphaproteobacteria
Bradyrhizobium elkanii 587 [AJJK]
13576
13651
+
Ala
CGC
[ENA]
¡û
>W121065226
AJPV01000463
Alphaproteobacteria
Bradyrhizobium elkanii CCBAU 05737 [AJPV]
8865
8790
-
Ala
CGC
[ENA]
¡û
>W121065233
AJPW01000042
Alphaproteobacteria
Bradyrhizobium elkanii CCBAU 43297 [AJPW]
26126
26201
+
Ala
CGC
[ENA]
¡û
>W121065280
AJPX01000078
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15354 [AJPX]
7087
7162
+
Ala
CGC
[ENA]
¡û
>W121065336
AJPY01000231
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15517 [AJPY]
17353
17278
-
Ala
CGC
[ENA]
¡û
>W121065396
AJPZ01000316
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15618 [AJPZ]
7048
7123
+
Ala
CGC
[ENA]
¡û
>W121065426
AJQA01000101
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 25435 [AJQA]
24952
25027
+
Ala
CGC
[ENA]
¡û
>W121065471
AJQB01000132
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 83623 [AJQB]
7091
7166
+
Ala
CGC
[ENA]
¡û
>W121065528
AJQC01000281
Alphaproteobacteria
Bradyrhizobium liaoningense CCBAU 05525 [AJQC]
4740
4815
+
Ala
CGC
[ENA]
¡û
>W121065583
AJQD01000385
Alphaproteobacteria
Bradyrhizobium liaoningense CCBAU 83689 [AJQD]
19611
19536
-
Ala
CGC
[ENA]
¡û
>W121065611
AJQE01000094
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 43298 [AJQE]
2621
2696
+
Ala
CGC
[ENA]
¡û
>W121065697
AJQF01000462
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 15544 [AJQF]
22924
22849
-
Ala
CGC
[ENA]
¡û
>W121065723
AJQG01000210
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 15615 [AJQG]
31761
31836
+
Ala
CGC
[ENA]
¡û
>W121065797
AJQI01000012
Alphaproteobacteria
Bradyrhizobium diazoefficiens CCBAU 41267 [AJQI]
28750
28825
+
Ala
CGC
[ENA]
¡û
>W121065854
AJQJ01000168
Alphaproteobacteria
Bradyrhizobium yuanmingense CCBAU 05623 [AJQJ]
21957
22032
+
Ala
CGC
[ENA]
¡û
>W121065902
AJQK01000124
Alphaproteobacteria
Bradyrhizobium yuanmingense CCBAU 25021 [AJQK]
31907
31982
+
Ala
CGC
[ENA]
¡û
>W121065951
AJQL01000117
Alphaproteobacteria
Bradyrhizobium yuanmingense CCBAU 35157 [AJQL]
18536
18608
+
Ala
CGC
[ENA]
¡û
>W121085077
AKIY01000197
Alphaproteobacteria
Bradyrhizobium sp. YR681 [AKIY]
9900
9825
-
Ala
CGC
[ENA]
¡û
>W121127105
CAFH01000293
Alphaproteobacteria
Bradyrhizobium sp. ORS 285 [CAFH]
1015
1090
+
Ala
CGC
[ENA]
¡û
>W1610049406
BBEX01000671
Alphaproteobacteria
Bradyrhizobium sp. 17-4 [BBEX]
1745
1820
+
Ala
CGC
[ENA]
¡û
>C131000796
AP012603
Alphaproteobacteria
Bradyrhizobium oligotrophicum S58 [AP012603]
300306
300381
+
Ala
CGC
[Ensembl]
¡û
>W1610514414
FMAE01000002
Alphaproteobacteria
Bradyrhizobium yuanmingense [FMAE]
377702
377627
-
Ala
CGC
[ENA]
¡û
>W1610514625
FMAI01000019
Alphaproteobacteria
Bradyrhizobium shewense err11 [FMAI]
149864
149939
+
Ala
CGC
[ENA]
¡û
>W1610549143
JXDL01000001
Alphaproteobacteria
Bradyrhizobium sp. AT1 [JXDL]
4954713
4954788
+
Ala
CGC
[ENA]
¡û
>W1610550300
JXJM01000001
Alphaproteobacteria
Bradyrhizobium sp. DOA1 [JXJM]
6783615
6783690
+
Ala
CGC
[ENA]
¡û
>W1610649524
LJIC01000074
Alphaproteobacteria
Rhodopseudomonas sp. AAP120 [LJIC]
30946
31021
+
Ala
CGC
[ENA]
¡û
>W1610666808
LJYE01000115
Alphaproteobacteria
Bradyrhizobium pachyrhizi [LJYE]
44347
44422
+
Ala
CGC
[ENA]
¡û
>W1610666814
LJYF01000002
Alphaproteobacteria
Bradyrhizobium yuanmingense [LJYF]
117368
117293
-
Ala
CGC
[ENA]
¡û
>W1610666859
LJYG01000004
Alphaproteobacteria
Bradyrhizobium manausense [LJYG]
29534
29609
+
Ala
CGC
[ENA]
¡û
>W1610717297
LLXX01000224
Alphaproteobacteria
Bradyrhizobium valentinum [LLXX]
18980
18905
-
Ala
CGC
[ENA]
¡û
>W1610717343
LLXY01000198
Alphaproteobacteria
Bradyrhizobium valentinum [LLXY]
14613
14688
+
Ala
CGC
[ENA]
¡û
>W1610717381
LLXZ01000054
Alphaproteobacteria
Bradyrhizobium jicamae [LLXZ]
56328
56253
-
Ala
CGC
[ENA]
¡û
>W1610717432
LLYA01000068
Alphaproteobacteria
Bradyrhizobium retamae [LLYA]
101250
101325
+
Ala
CGC
[ENA]
¡û
>W1610717434
LLYA01000068
Alphaproteobacteria
Bradyrhizobium retamae [LLYA]
35809
35734
-
Ala
CGC
[ENA]
¡û
>W1610717524
LLYB01000123
Alphaproteobacteria
Bradyrhizobium lablabi [LLYB]
250462
250387
-
Ala
CGC
[ENA]
¡û
>W1610723789
LMDP01000003
Alphaproteobacteria
Afipia sp. Root123D2 [LMDP]
848594
848519
-
Ala
CGC
[ENA]
¡û
>W1610726600
LMFS01000003
Alphaproteobacteria
Pseudolabrys sp. Root1462 [LMFS]
351843
351768
-
Ala
CGC
[ENA]
¡û
>W1610740101
LMQJ01000056
Alphaproteobacteria
Bradyrhizobium sp. Leaf396 [LMQJ]
143569
143644
+
Ala
CGC
[ENA]
¡û
>W1610751798
LNCU01000120
Alphaproteobacteria
Bradyrhizobium macuxiense BR 10303 [LNCU]
206698
206623
-
Ala
CGC
[ENA]
¡û
>W1610752692
LNDS01000041
Alphaproteobacteria
Rhizobiales bacterium Ga0077525 [LNDS]
41166
41241
+
Ala
CGC
[ENA]
¡û
>W1610753051
LNEC01000019
Alphaproteobacteria
Bradyrhizobiaceae bacterium Ga0074131 [LNEC]
282263
282188
-
Ala
CGC
[ENA]
¡û
>W1610907968
LSEF01000050
Alphaproteobacteria
Bradyrhizobium neotropicale [LSEF]
26744
26819
+
Ala
CGC
[ENA]
¡û
>W1610912247
LSIC01000073
Alphaproteobacteria
Bradyrhizobium sp. CCH5-F6 [LSIC]
243207
243132
-
Ala
CGC
[ENA]
¡û
>W1610912690
LSIM01000190
Alphaproteobacteria
Bradyrhizobium sp. CCH4-A6 [LSIM]
22474
22549
+
Ala
CGC
[ENA]
¡û
>W1610912738
LSIN01000236
Alphaproteobacteria
Bradyrhizobium sp. CCH10-C7 [LSIN]
104140
104065
-
Ala
CGC
[ENA]
¡û
>W1610935772
LUKO01000160
Alphaproteobacteria
Bradyrhizobium liaoningense [LUKO]
508062
507987
-
Ala
CGC
[ENA]
¡û
>W1610940711
LUUB01000129
Alphaproteobacteria
Bradyrhizobium centrolobii BR 10245 [LUUB]
60072
59997
-
Ala
CGC
[ENA]
¡û
>W1610949884
LVEM01000002
Alphaproteobacteria
Bradyrhizobium stylosanthis [LVEM]
176717
176792
+
Ala
CGC
[ENA]
¡û
>W1610979001
LVYV01000054
Alphaproteobacteria
Tardiphaga robiniae [LVYV]
242445
242370
-
Ala
CGC
[ENA]
¡û
>WENV077665
AAFX01083333
Soil microbial communities from Minnesota Farm
379
304
-
Ala
CGC
[ENA]
>W1611061252
MAXB01000065
Alphaproteobacteria
Bradyrhizobium paxllaeri [MAXB]
32669
32744
+
Ala
CGC
[ENA]
¡û
>W1611061289
MAXC01000023
Alphaproteobacteria
Bradyrhizobium sp. LMTR 3 [MAXC]
25357
25432
+
Ala
CGC
[ENA]
¡û
>W1710045805
BBEX01000671
Alphaproteobacteria
Bradyrhizobium sp. 17-4 [BBEX]
1745
1820
+
Ala
CGC
[ENA]
¡û
>W1710500104
FMAE01000002
Alphaproteobacteria
Bradyrhizobium yuanmingense [FMAE]
377702
377627
-
Ala
CGC
[ENA]
¡û
>W1710500315
FMAI01000019
Alphaproteobacteria
Bradyrhizobium shewense err11 [FMAI]
149864
149939
+
Ala
CGC
[ENA]
¡û
>W1710513066
FMZW01000037
Alphaproteobacteria
Bradyrhizobium brasilense R5 [FMZW]
37845
37770
-
Ala
CGC
[ENA]
¡û
>W1710516746
FNCU01000004
Alphaproteobacteria
Bradyrhizobium sp. Rc2d [FNCU]
264165
264090
-
Ala
CGC
[ENA]
¡û
>W1710536592
FNTH01000001
Alphaproteobacteria
Bradyrhizobium erythrophlei [FNTH]
5373224
5373149
-
Ala
CGC
[ENA]
¡û
>W1710536644
FNTI01000001
Alphaproteobacteria
Bradyrhizobium lablabi [FNTI]
3653513
3653438
-
Ala
CGC
[ENA]
¡û
>W1710540657
FNWZ01000002
Alphaproteobacteria
Tardiphaga sp. OK245 [FNWZ]
951353
951428
+
Ala
CGC
[ENA]
¡û
>W1710546005
FOBX01000005
Alphaproteobacteria
Bradyrhizobium sp. OK095 [FOBX]
288845
288770
-
Ala
CGC
[ENA]
¡û
>W1710548419
FODT01000006
Alphaproteobacteria
Rhodopseudomonas pseudopalustris [FODT]
342228
342303
+
Ala
CGC
[ENA]
¡û
>W1710564278
FOQJ01000008
Alphaproteobacteria
Bradyrhizobium sp. cf659 [FOQJ]
125689
125614
-
Ala
CGC
[ENA]
¡û
>W1710564435
FOQM01000020
Alphaproteobacteria
Bradyrhizobium sp. Gha [FOQM]
125372
125297
-
Ala
CGC
[ENA]
¡û
>W1710568412
FOTP01000001
Alphaproteobacteria
Bradyrhizobium sp. NFR13 [FOTP]
1143679
1143604
-
Ala
CGC
[ENA]
¡û
>W1710569827
FOUS01000015
Alphaproteobacteria
Bradyrhizobium sp. Rc3b [FOUS]
154442
154517
+
Ala
CGC
[ENA]
¡û
>W1710571280
FOVU01000001
Alphaproteobacteria
Bradyrhizobium sp. Ghvi [FOVU]
1253208
1253133
-
Ala
CGC
[ENA]
¡û
>W1710578499
FPBQ01000001
Alphaproteobacteria
Bradyrhizobium arachidis [FPBQ]
26446
26521
+
Ala
CGC
[ENA]
¡û
>W1710594242
FSRD01000001
Alphaproteobacteria
Bradyrhizobium erythrophlei [FSRD]
1603662
1603737
+
Ala
CGC
[ENA]
¡û
>W1710652717
JXDL01000001
Alphaproteobacteria
Bradyrhizobium sp. AT1 [JXDL]
4954713
4954788
+
Ala
CGC
[ENA]
¡û
>W1710659026
JXJM01000001
Alphaproteobacteria
Bradyrhizobium sp. DOA1 [JXJM]
6783615
6783690
+
Ala
CGC
[ENA]
¡û
>W1710735588
LGHK01000092
Alphaproteobacteria
Bradyrhizobium sp. NAS96.2 [LGHK]
30152
30227
+
Ala
CGC
[ENA]
¡û
>W1710735666
LGHL01000245
Alphaproteobacteria
Bradyrhizobium sp. NAS80.1 [LGHL]
6441
6516
+
Ala
CGC
[ENA]
¡û
>W1710735693
LGHM01000098
Alphaproteobacteria
Bradyrhizobium sp. AS23.2 [LGHM]
1139
1064
-
Ala
CGC
[ENA]
¡û
Identical group No.458478 (33 seq.)
>W131053681
ANAH01000004
Myxococcota
Cystobacter fuscus DSM 2262 [ANAH]
93967
94042
+
Ala
CGC
[ENA]
¡û
>W131086603
AOBT01000001
Myxococcota
Myxococcus xanthus DZF1 [AOBT]
59762
59837
+
Ala
CGC
[ENA]
¡û
>W1711625253
MPIN01000002
Myxococcota
Cystobacter ferrugineus [MPIN]
510812
510737
-
Ala
CGC
[ENA]
¡û
>W1711628626
MPOI01000006
Myxococcota
Archangium sp. Cb G35 [MPOI]
254350
254425
+
Ala
CGC
[ENA]
¡û
>C014504
CP000113
Myxococcota
Myxococcus xanthus DK 1622 [CP000113]
6624027
6624102
+
Ala
CGC
[Ensembl]
¡û
>WENV181184980
OEKZ01000580
[OEKZ] metagenome; 1998
77
4
-
Ala
CGC
[ENA]
¢þ
>WENV170558477
CXWL01072750
[CXWL] groundwater metagenome; biofilm material
912
837
-
Ala
CGC
[ENA]
¢þ
>C181057859
CP022098
Myxococcota
Cystobacter fuscus DSM 52655 [CP022098]
8898829
8898904
+
Ala
CGC
-
¡û
>C181059840
CP022163
Myxococcota
Melittangium boletus DSM 14713 [CP022163]
6649033
6648958
-
Ala
CGC
-
¡û
>C181060644
CP022203
Myxococcota
Corallococcus macrosporus DSM 14697 [CP022203]
6526973
6527048
+
Ala
CGC
-
¡û
>C191013140
CP017169
Myxococcota
Myxococcus xanthus GH3.5.6c2 [CP017169]
6743940
6744015
+
Ala
CGC
-
¡û
>C191013205
CP017170
Myxococcota
Myxococcus xanthus GH5.1.9c20 [CP017170]
6671657
6671732
+
Ala
CGC
-
¡û
>C191013271
CP017171
Myxococcota
Myxococcus xanthus KF3.2.8c11 [CP017171]
6366846
6366921
+
Ala
CGC
-
¡û
>C191013336
CP017172
Myxococcota
Myxococcus xanthus KF4.3.9c1 [CP017172]
6819688
6819763
+
Ala
CGC
-
¡û
>C191013401
CP017173
Myxococcota
Myxococcus xanthus MC3.3.5c16 [CP017173]
6715349
6715424
+
Ala
CGC
-
¡û
>C191013466
CP017174
Myxococcota
Myxococcus xanthus MC3.5.9c15 [CP017174]
6715344
6715419
+
Ala
CGC
-
¡û
>C191128696
CP034669
Myxococcota
Corallococcus coralloides B035 [CP034669]
2550159
2550084
-
Ala
CGC
-
¡û
>W141806666
JPMI01000228
Myxococcota
Archangium violaceum Cb vi76 [JPMI]
32078
32003
-
Ala
CGC
[ENA]
¡û
>W1911701630
QNUN01000026
Myxococcota
Corallococcus sp. H22C18031201 [QNUN]
40010
40085
+
Ala
CGC
[ENA]
¡û
>W1810452225
PZOX01000016
Myxococcota
Vitiosangium sp. GDMCC 1.1324 [PZOX]
29589
29514
-
Ala
CGC
[ENA]
¡û
>W1810884681
QUMU01000003
Myxococcota
Archangium gephyra DSM 2261 [QUMU]
786582
786507
-
Ala
CGC
[ENA]
¡û
>C151008183
CP006003
Myxococcota
Myxococcus fulvus 124B02 [CP006003]
8140850
8140925
+
Ala
CGC
[Ensembl]
¡û
>C151083596
CP011509
Myxococcota
Archangium gephyra DSM 2261 [CP011509]
4344502
4344427
-
Ala
CGC
[Ensembl]
¡û
>C151091058
CP012109
Myxococcota
Myxococcus hansupus mixupus [CP012109]
1856040
1855965
-
Ala
CGC
[Ensembl]
¡û
>C11114336
CP002830
Myxococcota
Corallococcus macrosporus HW-1 [CP002830]
8474024
8474099
+
Ala
CGC
[Ensembl]
¡û
>C121012096
CP003389
Myxococcota
Corallococcus coralloides DSM 2259 [CP003389]
2709822
2709747
-
Ala
CGC
[Ensembl]
¡û
>W121102848
AKXT01000009
Myxococcota
Myxococcus hansupus DSM 436 [AKXT]
84390
84465
+
Ala
CGC
[ENA]
¡û
>W121103134
AKYI01001430
Myxococcota
Myxococcus xanthus DZ2 [AKYI]
1819
1744
-
Ala
CGC
[ENA]
¡û
>C131011671
CP004025
Myxococcota
Myxococcus stipitatus DSM 14675 [CP004025]
7587607
7587682
+
Ala
CGC
[Ensembl]
¡û
>WENV077671
AAFX01084361
Soil microbial communities from Minnesota Farm
74
149
+
Ala
CGC
[ENA]
>W1710513700
FNAJ01000004
Myxococcota
Myxococcus virescens [FNAJ]
13806
13881
+
Ala
CGC
[ENA]
¡û
>W1710529830
FNOH01000017
Myxococcota
Myxococcus xanthus [FNOH]
113059
113134
+
Ala
CGC
[ENA]
¡û
>W1710553973
FOIB01000002
Myxococcota
Myxococcus fulvus [FOIB]
57636
57711
+
Ala
CGC
[ENA]
¡û
Identical group No.486235 (16 seq.)
>WENV180018958
FTBE01000046
[FTBE] metagenome; soil
52655
52582
-
Ala
CGC
[ENA]
¢þ
>WENV180291509
OBIV01071880
[OBIV] soil metagenome; Clay
250
322
+
Ala
CGC
[ENA]
¢þ
>WENV180342993
OBLJ01238416
[OBLJ] soil metagenome; Clay
78
150
+
Ala
CGC
[ENA]
¢þ
>WENV180343539
OBLK01034267
[OBLK] soil metagenome; Clay
443
515
+
Ala
CGC
[ENA]
¢þ
>WENV181123164
OEFO01139779
[OEFO] soil metagenome; soil
90
162
+
Ala
CGC
[ENA]
¢þ
>WENV181155341
OEID01111047
[OEID] soil metagenome; soil
181
109
-
Ala
CGC
[ENA]
¢þ
>WENV181163808
OEIQ01268531
[OEIQ] soil metagenome; soil
81
153
+
Ala
CGC
[ENA]
¢þ
>WENV181164436
OEIR01162477
[OEIR] soil metagenome; soil
170
242
+
Ala
CGC
[ENA]
¢þ
>WENV181165589
OEIS01048859
[OEIS] soil metagenome; soil
152
225
+
Ala
CGC
[ENA]
¢þ
>WENV181185775
OEMA01001399
[OEMA] metagenome; 1998
1068
1140
+
Ala
CGC
[ENA]
¢þ
>WENV181185831
OEMB01000495
[OEMB] metagenome; 1998
6439
6365
-
Ala
CGC
[ENA]
¢þ
>WENV181295310
OFHI01016555
[OFHI] soil metagenome; Clay
198
270
+
Ala
CGC
[ENA]
¢þ
>WENV181298068
OFHL01023134
[OFHL] soil metagenome; Clay
817
743
-
Ala
CGC
[ENA]
¢þ
>WENV170574573
FLYN01000268
[FLYN] hot springs metagenome; Sediment
4977
4904
-
Ala
CGC
[ENA]
¢þ
>WENV077583
AAFX01066177
Soil microbial communities from Minnesota Farm
431
356
-
Ala
CGC
[ENA]
>W1710539975
FNWJ01000001
Actinomycetota
Thermoleophilum album [FNWJ]
614182
614255
+
Ala
CGC
[ENA]
¡û
Identical group No.529701 (5 seq.)
>WENV180015978
FSTT01000331
[FSTT] metagenome; soil
693
618
-
Ala
CGC
[ENA]
¢þ
>WENV180029066
FTJI01016635
[FTJI] metagenome; soil
1
76
+
Ala
CGC
[ENA]
¢þ
>WENV180033512
FTKK01178033
[FTKK] metagenome; soil
534
609
+
Ala
CGC
[ENA]
¢þ
>WENV180034588
FTKR01016373
[FTKR] metagenome; soil
1
76
+
Ala
CGC
[ENA]
¢þ
>WENV077347
AAFX01024692
Soil microbial communities from Minnesota Farm
351
428
+
Ala
CGC
[ENA]
Identical group No.550630 (1 seq.)
>WENV077278
AAFX01015880
Soil microbial communities from Minnesota Farm
814
891
+
Ala
CGC
[ENA]
Identical group No.550668 (1 seq.)
>WENV077538
AAFX01056465
Soil microbial communities from Minnesota Farm
489
414
-
Ala
CGC
[ENA]
Identical group No.550670 (3 seq.)
>W1910697445
MEKS01000050
Acidobacteriota
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15 [MEKS]
14882
14807
-
Ala
CGC
[ENA]
¡û
>W1910697761
MELA01000137
Acidobacteriota
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11 [MELA]
13903
13828
-
Ala
CGC
[ENA]
¡û
>WENV077542
AAFX01057505
Soil microbial communities from Minnesota Farm
336
259
-
Ala
CGC
[ENA]
Identical group No.550672 (1 seq.)
>WENV077559
AAFX01061327
Soil microbial communities from Minnesota Farm
69
144
+
Ala
CGC
[ENA]
Identical group No.550693 (1 seq.)
>WENV077759
AAFX01101940
Soil microbial communities from Minnesota Farm
318
395
+
Ala
CGC
[ENA]
Identical group No.550696 (1 seq.)
>WENV077779
AAFX01105153
Soil microbial communities from Minnesota Farm
166
243
+
Ala
CGC
[ENA]
Identical group No.550710 (1 seq.)
>WENV077916
AAFX01125033
Soil microbial communities from Minnesota Farm
489
414
-
Ala
CGC
[ENA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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