tRNA genes clustered and arranged according to each identical group

Soil microbial communities from Minnesota Farm

Anticodon = TTT

HIT: 22 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.490511 (11 seq.)
>W1710860970 LMDH01000001 Actinomycetota Aeromicrobium sp. Root344 [LMDH] 2018397 2018324 - Lys TTT [ENA] ¡û
>W1710867984 LMIS01000001 Actinomycetota Aeromicrobium sp. Root236 [LMIS] 3079078 3079005 - Lys TTT [ENA] ¡û
>W131226746 AUEP01000010 Actinomycetota Marmoricola sp. URHB0036 [AUEP] 177651 177576 - Lys TTT [ENA] ¡û
>WENV180691201 OCZS010075282 [OCZS] soil metagenome; soil 138 65 - Lys TTT [ENA] ¢þ
>C181144042 CP026952 Actinomycetota Aeromicrobium chenweiae 592 [CP026952] 467767 467693 - Lys TTT - ¡û
>W141563923 JIAI01000019 Actinomycetota Pseudonocardia acaciae DSM 45401 [JIAI] 83663 83588 - Lys TTT [ENA] ¡û
>W1810870279 QUBR01000001 Actinomycetota Aeromicrobium endophyticum M2KJ-4 [QUBR] 1848989 1848914 - Lys TTT [ENA] ¡û
>C11114876 AP012204 Actinomycetota Microlunatus phosphovorus NM-1 [AP012204] 808661 808736 + Lys TTT [Ensembl] ¡û
>W1610723316 LMDH01000001 Actinomycetota Aeromicrobium sp. Root344 [LMDH] 2018397 2018324 - Lys TTT [ENA] ¡û
>W1610730330 LMIS01000001 Actinomycetota Aeromicrobium sp. Root236 [LMIS] 3079078 3079005 - Lys TTT [ENA] ¡û
>WENV077693 AAFX01088613 Soil microbial communities from Minnesota Farm 353 428 + Lys TTT [ENA]
Identical group No.491214 (13 seq.)
>W1710856797 LLZQ01000006 Alphaproteobacteria Novosphingobium sp. FSW06-99 [LLZQ] 151099 151024 - Lys TTT [ENA] ¡û
>W1710856866 LLZR01000021 Alphaproteobacteria Novosphingobium sp. Fuku2-ISO-50 [LLZR] 164 89 - Lys TTT [ENA] ¡û
>W1711387017 MEGC01000050 Alphaproteobacteria Novosphingobium sp. SCN 63-17 [MEGC] 29170 29245 + Lys TTT [ENA] ¡û
>W1711505651 MKVS01000044 Alphaproteobacteria Novosphingobium sp. 63-713 [MKVS] 29348 29423 + Lys TTT [ENA] ¡û
>W1711506386 MKWI01000035 Alphaproteobacteria Sphingobium sp. 66-54 [MKWI] 31906 31981 + Lys TTT [ENA] ¡û
>W131160228 AQWK01000008 Alphaproteobacteria Novosphingobium nitrogenifigens DSM 19370 [AQWK] 17001 16926 - Lys TTT [ENA] ¡û
>W131222148 AUBA01000019 Alphaproteobacteria Novosphingobium acidiphilum DSM 19966 [AUBA] 59983 60058 + Lys TTT [ENA] ¡û
>WENV181184408 OEKC01000071 [OEKC] metagenome; 1998 8961 8886 - Lys TTT [ENA] ¢þ
>WENV183660872 ORJL010062492 [ORJL] groundwater metagenome; groundwater 1759 1684 - Lys TTT [ENA] ¢þ
>W11151086 AEWJ01000054 Alphaproteobacteria Novosphingobium nitrogenifigens DSM 19370 [AEWJ] 16731 16656 - Lys TTT [ENA] ¡û
>W1610719178 LLZQ01000006 Alphaproteobacteria Novosphingobium sp. FSW06-99 [LLZQ] 151099 151024 - Lys TTT [ENA] ¡û
>W1610719247 LLZR01000021 Alphaproteobacteria Novosphingobium sp. Fuku2-ISO-50 [LLZR] 164 89 - Lys TTT [ENA] ¡û
>WENV077842 AAFX01113746 Soil microbial communities from Minnesota Farm 616 693 + Lys TTT [ENA]
Identical group No.496689 (2 seq.)
>WENV181192881 OEPS011156922 [OEPS] soil metagenome; soil 190 118 - Lys TTT [ENA] ¢þ
>WENV077294 AAFX01017873 Soil microbial communities from Minnesota Farm 934 859 - Lys TTT [ENA]
Identical group No.512456 (3 seq.)
>WENV180327574 OBKT01268439 [OBKT] soil metagenome; soil 135 210 + Lys TTT [ENA] ¢þ
>WENV077247 AAFX01012037 Soil microbial communities from Minnesota Farm 488 563 + Lys TTT [ENA]
>WENV077783 AAFX01106606 Soil microbial communities from Minnesota Farm 273 198 - Lys TTT [ENA]
Identical group No.544869 (2 seq.)
>WENV181401632 OFTX01001831 [OFTX] sludge metagenome; sludge 4063 3988 - Lys TTT [ENA] ¢þ
>WENV077605 AAFX01070105 Soil microbial communities from Minnesota Farm 757 682 - Lys TTT [ENA]
Identical group No.550632 (1 seq.)
>WENV077314 AAFX01021612 Soil microbial communities from Minnesota Farm 341 416 + Lys TTT [ENA]
Identical group No.550649 (2 seq.)
>W1810914454 QVPD01000001 Gammaproteobacteria Luteimonas weifangensis WF-2 [QVPD] 247011 246936 - Lys TTT [ENA] ¡û
>WENV077420 AAFX01035457 Soil microbial communities from Minnesota Farm 327 404 + Lys TTT [ENA]
Identical group No.550652 (1 seq.)
>WENV077435 AAFX01037919 Soil microbial communities from Minnesota Farm 674 749 + Lys TTT [ENA]
Identical group No.550657 (1 seq.)
>WENV077457 AAFX01041995 Soil microbial communities from Minnesota Farm 462 537 + Lys TTT [ENA]
Identical group No.550665 (1 seq.)
>WENV077520 AAFX01052405 Soil microbial communities from Minnesota Farm 77 152 + Lys TTT [ENA]
Identical group No.550667 (3 seq.)
>WENV077529 AAFX01054040 Soil microbial communities from Minnesota Farm 215 140 - Lys TTT [ENA]
>WENV077644 AAFX01080256 Soil microbial communities from Minnesota Farm 227 152 - Lys TTT [ENA]
>WENV077876 AAFX01117553 Soil microbial communities from Minnesota Farm 161 86 - Lys TTT [ENA]
Identical group No.550677 (1 seq.)
>WENV077602 AAFX01069843 Soil microbial communities from Minnesota Farm 237 162 - Lys TTT [ENA]
Identical group No.550682 (1 seq.)
>WENV077621 AAFX01073620 Soil microbial communities from Minnesota Farm 483 558 + Lys TTT [ENA]
Identical group No.550692 (1 seq.)
>WENV077745 AAFX01098717 Soil microbial communities from Minnesota Farm 756 681 - Lys TTT [ENA]
Identical group No.550694 (3 seq.)
>WENV170556669 CXWL01011868 [CXWL] groundwater metagenome; biofilm material 15630 15703 + Lys TTT [ENA] ¢þ
>WENV170565862 FKKE01001636 [FKKE] freshwater metagenome; freshwater 15632 15707 + Lys TTT [ENA] ¢þ
>WENV077765 AAFX01103175 Soil microbial communities from Minnesota Farm 283 358 + Lys TTT [ENA]
Identical group No.678431 (2 seq.)
>WENV180692589 OCZS010629264 [OCZS] soil metagenome; soil 141 69 - Lys TTT [ENA] ¢þ
>WENV077890 AAFX01119459 Soil microbial communities from Minnesota Farm 24 100 + Lys TTT [ENA]
Identical group No.712705 (1 seq.)
>WENV077277 AAFX01015714 Soil microbial communities from Minnesota Farm 1130 1056 - Lys TTT [ENA]
Identical group No.712714 (1 seq.)
>WENV077341 AAFX01024373 Soil microbial communities from Minnesota Farm 638 714 + Lys TTT [ENA]
Identical group No.712722 (2 seq.)
>WENV170904087 MDTE01007337 [MDTE] marine metagenome; seawater 42387 42461 + Lys TTT [ENA] ¢þ
>WENV077430 AAFX01037706 Soil microbial communities from Minnesota Farm 521 595 + Lys TTT [ENA]
Identical group No.712751 (1 seq.)
>WENV077789 AAFX01107479 Soil microbial communities from Minnesota Farm 501 425 - Lys TTT [ENA]
Identical group No.806093 (1 seq.)
>WENV077439 AAFX01039095 Soil microbial communities from Minnesota Farm 750 677 - Lys TTT [ENA]
Identical group No.806101 (1 seq.)
>WENV077913 AAFX01124102 Soil microbial communities from Minnesota Farm 337 262 - Lys TTT [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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