tRNA genes clustered and arranged according to each identical group

Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)

Anticodon = ACG

HIT: 1 Group(s).
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.452900 (23 seq.)
>W1711125307 LUND01000061 Actinomycetota Actinobacteria bacterium REDSEA-S36_B12 [LUND] 8956 9031 + Arg ACG [ENA] ¡û
>WENV180115001 OAPS01093249 [OAPS] marine metagenome; sea water 418 345 - Arg ACG [ENA] ¢þ
>WENV180388131 OBPG01057305 [OBPG] marine metagenome; Sterile flask 169 96 - Arg ACG [ENA] ¢þ
>WENV181399934 OFSF01000339 [OFSF] wastewater metagenome; Exp Tend VB 100WW 15583 15510 - Arg ACG [ENA] ¢þ
>ENV08000775 ABMI01157183 saltern metagenome; microbial fraction from low salinity saltern in San Diego, CA 3 76 + Arg ACG [ENA] ¡û
>WENV170128464 CENQ01007060 [CENQ] marine metagenome genome assembly TARA_031_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2463 2538 + Arg ACG [ENA] ¢þ
>WENV170140023 CENX01049916 [CENX] marine metagenome genome assembly TARA_018_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1394 1321 - Arg ACG [ENA] ¢þ
>WENV170148435 CENZ01365521 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 165 92 - Arg ACG [ENA] ¢þ
>WENV170386946 CETY01246556 [CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 103 176 + Arg ACG [ENA] ¢þ
>WENV170579622 FUFK010040072 [FUFK] metagenome; unknown 36087 36012 - Arg ACG [ENA] ¢þ
>WENV170584739 FUFK010233318 [FUFK] metagenome; unknown 508 583 + Arg ACG [ENA] ¢þ
>WENV170587216 FUFK010475285 [FUFK] metagenome; unknown 896 971 + Arg ACG [ENA] ¢þ
>WENV170728448 LULE01031679 [LULE] marine metagenome; Red Sea water column Station 192 - depth 10m 453 528 + Arg ACG [ENA] ¢þ
>WENV170731745 LULI01002687 [LULI] marine metagenome; Red Sea water column Station 169 - depth 50m 8956 9031 + Arg ACG [ENA] ¢þ
>WENV170743239 LULV01020541 [LULV] marine metagenome; Red Sea water column Station 108 - depth 25m 282 207 - Arg ACG [ENA] ¢þ
>WENV170744130 LULW01026607 [LULW] marine metagenome; Red Sea water column Station 108 - depth 10m 561 486 - Arg ACG [ENA] ¢þ
>WENV170917602 MDTE01194756 [MDTE] marine metagenome; seawater 2375 2450 + Arg ACG [ENA] ¢þ
>WENV170973442 MTKY01040967 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 268 193 - Arg ACG [ENA] ¢þ
>WENV170973961 MTKY01052154 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 12703 12778 + Arg ACG [ENA] ¢þ
>SRA1000680 SRR001046.65564 Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138) 3 76 + Arg ACG [SRA]
>W1610625565 LIAU01000116 Actinomycetota Actinobacteria bacterium BACL2 MAG-120820-bin50 [LIAU] 2468 2393 - Arg ACG [ENA] ¡û
>W1610936240 LUND01000061 Actinomycetota Actinobacteria bacterium REDSEA-S36_B12 [LUND] 8956 9031 + Arg ACG [ENA] ¡û
>W1710756692 LIAU01000116 Actinomycetota Actinobacteria bacterium BACL2 MAG-120820-bin50 [LIAU] 2468 2393 - Arg ACG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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