tRNA genes clustered and arranged according to each identical group

Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)

Anticodon = CCT

HIT: 3 Group(s).
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.271883 (2 seq.)
>ENV08000728 ABMI01027243 saltern metagenome; microbial fraction from low salinity saltern in San Diego, CA 107 31 - Arg CCT [ENA] ¡û
>SRA1000719 SRR001046.181417 Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138) 107 31 - Arg CCT [SRA]
Identical group No.271887 (17 seq.)
>w020842 AAVE01000001 Alphaproteobacteria Dinoroseobacter shibae DFL 12 [AAVE] 717386 717462 + Arg CCT [ENA] ¡û
>W141151707 AXBG01000021 Alphaproteobacteria Sedimentitalea nanhaiensis DSM 24252 [AXBG] 416693 416769 + Arg CCT [ENA] ¡û
>C08004186 CP000830 Alphaproteobacteria Dinoroseobacter shibae DFL 12 = DSM 16493 [CP000830] 3495494 3495570 + Arg CCT [Ensembl] ¡û
>ENV08000717 ABMI01012034 saltern metagenome; microbial fraction from low salinity saltern in San Diego, CA 27 103 + Arg CCT [ENA] ¡û
>WENV170229038 CEQG01068266 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1019 1095 + Arg CCT [ENA] ¢þ
>WENV170477788 CEVJ01135129 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 423 347 - Arg CCT [ENA] ¢þ
>WENV170483182 CEVM01098071 [CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 134 210 + Arg CCT [ENA] ¢þ
>WENV170488264 CEVO01148767 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 515 439 - Arg CCT [ENA] ¢þ
>C181052333 CP021404 Alphaproteobacteria Pacificitalea manganoxidans DY25 [CP021404] 2774480 2774404 - Arg CCT - ¡û
>W1910442763 FWFM01000013 Alphaproteobacteria Marinovum algicola CECT 5396 [FWFM] 136926 137002 + Arg CCT [ENA] ¡û
>W1911189725 NQWH01000024 Alphaproteobacteria Limimaricola cinnabarinus XM1 [NQWH] 3508 3432 - Arg CCT [ENA] ¡û
>SRA1000738 SRR001046.240564 Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138) 27 103 + Arg CCT [SRA]
>C151006739 CP004393 Alphaproteobacteria Celeribacter indicus P73 [CP004393] 381513 381589 + Arg CCT [Ensembl] ¡û
>W1710015403 AQQQ01000007 Alphaproteobacteria Roseovarius sp. 22II1-1F6A [AQQQ] 134750 134826 + Arg CCT [ENA] ¡û
>W1710529334 FNNW01000027 Alphaproteobacteria Celeribacter indicus [FNNW] 50425 50501 + Arg CCT [ENA] ¡û
>W1710542190 FNYY01000012 Alphaproteobacteria Marinovum algicola [FNYY] 528 452 - Arg CCT [ENA] ¡û
>W1710577519 FPAW01000013 Alphaproteobacteria Sedimentitalea nanhaiensis [FPAW] 10882 10958 + Arg CCT [ENA] ¡û
Identical group No.452910 (1 seq.)
>SRA1000727 SRR001046.213449 Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138) 74 -1 - Arg CCT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
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