tRNA genes clustered and arranged according to each identical group

Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)

Anticodon = TGA

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.45800 (2 seq.)
>ENV08000729 ABMI01027451 saltern metagenome; microbial fraction from low salinity saltern in San Diego, CA 96 7 - Ser TGA [ENA] ¡û
>SRA1000732 SRR001046.220919 Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138) 96 7 - Ser TGA [SRA]
Identical group No.45801 (2 seq.)
>SRA1000741 SRR001046.244249 Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138) 43 131 + Ser TGA [SRA]
>SRA1000751 SRR001046.256528 Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138) 43 131 + Ser TGA [SRA]
Identical group No.86990 (21 seq.)
>WENV010924 AACY020296780 Marine microbial communities from Global Ocean Sampling (GOS) 733 644 - Ser TGA [ENA]
>WENV011091 AACY020302173 Marine microbial communities from Global Ocean Sampling (GOS) 786 875 + Ser TGA [ENA]
>WENV180099907 OANK01003284 [OANK] marine metagenome; ENVO:00002010 126 213 + Ser TGA [ENA] ¢þ
>WENV180101058 OAOU01000082 [OAOU] marine metagenome; ENVO:00002010 SEAWATER 15686 15773 + Ser TGA [ENA] ¢þ
>WENV180380327 OBOQ01027766 [OBOQ] marine metagenome; Fridge 185 272 + Ser TGA [ENA] ¢þ
>WENV180585366 OCOL01003284 [OCOL] marine metagenome; ENVO:00002010 126 213 + Ser TGA [ENA] ¢þ
>WENV180635326 OCRD01009413 [OCRD] marine metagenome; seawater 334 247 - Ser TGA [ENA] ¢þ
>WENV180641684 OCRN01025934 [OCRN] marine metagenome; ENVO:00002010, 'SEA WATER 320 233 - Ser TGA [ENA] ¢þ
>WENV018932 AACY020522522 Marine microbial communities from Global Ocean Sampling (GOS) 1134 1045 - Ser TGA [ENA]
>WENV018944 AACY020522911 Marine microbial communities from Global Ocean Sampling (GOS) 1603 1514 - Ser TGA [ENA]
>WENV019418 AACY020531776 Marine microbial communities from Global Ocean Sampling (GOS) 237 148 - Ser TGA [ENA]
>WENV019623 AACY020535727 Marine microbial communities from Global Ocean Sampling (GOS) 1178 1267 + Ser TGA [ENA]
>WENV170133423 CENU01024989 [CENU] marine metagenome genome assembly TARA_025_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 301 388 + Ser TGA [ENA] ¢þ
>WENV026617 AACY020980363 Marine microbial communities from Global Ocean Sampling (GOS) 627 716 + Ser TGA [ENA]
>SRA1000734 SRR001046.232575 Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138) 23 109 + Ser TGA [SRA]
>WENV034771 AACY021641255 Marine microbial communities from Global Ocean Sampling (GOS) 358 269 - Ser TGA [ENA]
>WENV041985 AACY022202612 Marine microbial communities from Global Ocean Sampling (GOS) 786 697 - Ser TGA [ENA]
>WENV050765 AACY022900573 Marine microbial communities from Global Ocean Sampling (GOS) 501 412 - Ser TGA [ENA]
>WENV051002 AACY022921824 Marine microbial communities from Global Ocean Sampling (GOS) 1 88 + Ser TGA [ENA]
>WENV070167 AACY023799859 Marine microbial communities from Global Ocean Sampling (GOS) 628 717 + Ser TGA [ENA]
>WENV070827 AACY023824591 Marine microbial communities from Global Ocean Sampling (GOS) 385 474 + Ser TGA [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK