tRNA genes clustered and arranged according to each identical group

Stramenopiles

Anticodon = TAG

HIT: 37 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.117630 (1 seq.)
>CHL1810019298 KR709240 Stramenopiles Pseudo-nitzschia multiseries (KR709240) 8891 8808 - Leu TAG [ENA] ¡û
Identical group No.152235 (1 seq.)
>CHL1861001720 KP881334 Stramenopiles Sargassum horneri (KP881334) 48020 47728 - Leu TAG [ENA] ¡û
Identical group No.162465 (3 seq.)
>WENV180100534 OAOO01001020 [OAOO] marine metagenome; ENVO:00002010 615 697 + Leu TAG [ENA] ¢þ
>CHL1810001008 EU168190 Stramenopiles Heterosigma akashiwo NIES 293 (EU168190) 11810 11892 + Leu TAG [ENA] ¡û
>CHL1810001022 EU168190 Stramenopiles Heterosigma akashiwo NIES 293 (EU168190) 70355 70273 - Leu TAG [ENA] ¡û
Identical group No.164180 (1 seq.)
>CHL1810001469 EU912438 Stramenopiles Vaucheria litorea (EU912438) 103600 103516 - Leu TAG [ENA] ¡û
Identical group No.174116 (1 seq.)
>CHL1810002202 GQ231542 Stramenopiles Aureoumbra lagunensis CCMP 1507 (GQ231542) 54308 54390 + Leu TAG [ENA] ¡û
Identical group No.178060 (1 seq.)
>CHL1810002184 GQ231541 Stramenopiles Aureococcus anophagefferens CCMP 1984 (GQ231541) 75096 75012 - Leu TAG [ENA] ¡û
Identical group No.181276 (4 seq.)
>WENV170303933 CESI01003982 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 591 673 + Leu TAG [ENA] ¢þ
>WENV170327589 CESU01095590 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 215 133 - Leu TAG [ENA] ¢þ
>WENV170820749 MDSY01009809 [MDSY] marine metagenome; seawater 2775 2693 - Leu TAG [ENA] ¢þ
>CHL1810000620 AP014625 Stramenopiles Triparma laevis (AP014625) 6519 6437 - Leu TAG [ENA] ¡û
Identical group No.183006 (49 seq.)
>WENV180081713 MPMC02142193 [MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter 204 285 + Leu TAG [ENA] ¢þ
>WENV180107097 OAPF01030440 [OAPF] marine metagenome; ENVO:00002010 422 341 - Leu TAG [ENA] ¢þ
>WENV180209010 OBAK01004701 [OBAK] marine metagenome; ENVO.00002150 286 367 + Leu TAG [ENA] ¢þ
>WENV180209554 OBAL01004059 [OBAL] marine metagenome; ENVO:00002019, 'BRACKISH WATER 916 997 + Leu TAG [ENA] ¢þ
>WENV180212306 OBAN01005249 [OBAN] marine metagenome; ENVO 00002150 58 139 + Leu TAG [ENA] ¢þ
>WENV180357299 OBNN01001066 [OBNN] marine metagenome; Coastal water 640 721 + Leu TAG [ENA] ¢þ
>WENV180359052 OBNR01001987 [OBNR] marine metagenome; Seawater_00002010_00002149 752 833 + Leu TAG [ENA] ¢þ
>WENV180361947 OBNW01012122 [OBNW] marine metagenome; ENVO:00002010, 'SEA WATER 465 384 - Leu TAG [ENA] ¢þ
>WENV180363177 OBNY01004468 [OBNY] marine metagenome; ENVO:00002010 258 339 + Leu TAG [ENA] ¢þ
>WENV180365258 OBOB01050389 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 400 481 + Leu TAG [ENA] ¢þ
>WENV180367032 OBOE01005141 [OBOE] marine metagenome; ENVO:00002010 951 870 - Leu TAG [ENA] ¢þ
>WENV180367661 OBOF01000103 [OBOF] marine metagenome; ENVO:00002010 90 9 - Leu TAG [ENA] ¢þ
>WENV180368742 OBOG01000002 [OBOG] marine metagenome; seawater 9859 9778 - Leu TAG [ENA] ¢þ
>WENV180370301 OBOH01066008 [OBOH] marine metagenome; ENVO:00002010 68 149 + Leu TAG [ENA] ¢þ
>WENV180376384 OBOM01004272 [OBOM] marine metagenome; Seawater 997 916 - Leu TAG [ENA] ¢þ
>WENV180399208 OBQG01014603 [OBQG] marine metagenome; ENV:00002010 420 339 - Leu TAG [ENA] ¢þ
>WENV180592295 OCOV01266026 [OCOV] marine metagenome; ENVO:01000301 82 1 - Leu TAG [ENA] ¢þ
>WENV180593982 OCOY01008144 [OCOY] marine metagenome; ENVO:00002010 993 912 - Leu TAG [ENA] ¢þ
>WENV180595710 OCPF01012087 [OCPF] marine metagenome; ENVO.00002150 204 123 - Leu TAG [ENA] ¢þ
>WENV180641663 OCRN01022637 [OCRN] marine metagenome; ENVO:00002010, 'SEA WATER 100 19 - Leu TAG [ENA] ¢þ
>WENV181392847 OFRX01009325 [OFRX] seawater metagenome; seawater 575 494 - Leu TAG [ENA] ¢þ
>WENV183054917 OLGU01022909 [OLGU] seawater metagenome; Sea water 56 137 + Leu TAG [ENA] ¢þ
>WENV183060460 OLHX01015202 [OLHX] seawater metagenome; Sea water 128 209 + Leu TAG [ENA] ¢þ
>WENV183620652 OOFS01009171 [OOFS] marine metagenome; sea ice 780 699 - Leu TAG [ENA] ¢þ
>WENV183629210 OOGP01009334 [OOGP] marine metagenome; seawater 575 494 - Leu TAG [ENA] ¢þ
>WENV170275941 CERM01236713 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 347 428 + Leu TAG [ENA] ¢þ
>WENV170296686 CESE01036460 [CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 468 387 - Leu TAG [ENA] ¢þ
>WENV170516447 CEWB01114352 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 506 425 - Leu TAG [ENA] ¢þ
>WENV170534825 CEWO01376882 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 75 156 + Leu TAG [ENA] ¢þ
>WENV170609016 FUWD011201762 [FUWD] metagenome; unknown 177 258 + Leu TAG [ENA] ¢þ
>WENV170634357 FYBJ01000336 [FYBJ] marine metagenome; marine 4906 4825 - Leu TAG [ENA] ¢þ
>WENV170639270 JFJP01001726 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 1008 1089 + Leu TAG [ENA] ¢þ
>WENV170647085 JQIA01010103 [JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead 3971 3890 - Leu TAG [ENA] ¢þ
>WENV170809516 MDSW01133563 [MDSW] marine metagenome; seawater 398 479 + Leu TAG [ENA] ¢þ
>WENV170816245 MDSX01026830 [MDSX] marine metagenome; seawater 246 327 + Leu TAG [ENA] ¢þ
>WENV170920298 MDTF01016711 [MDTF] marine metagenome; seawater 443 524 + Leu TAG [ENA] ¢þ
>CHL1810002576 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 78567 78648 + Leu TAG [ENA] ¡û
>CHL1810002585 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 133522 133441 - Leu TAG [ENA] ¡û
>CHL1810008414 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 102051 102132 + Leu TAG [ENA] ¡û
>CHL1810013683 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 71570 71651 + Leu TAG [ENA] ¡û
>CHL1810013687 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 119689 119608 - Leu TAG [ENA] ¡û
>CHL1810013706 KJ958484 Stramenopiles Cerataulina daemon (KJ958484) 72747 72829 + Leu TAG [ENA] ¡û
>CHL1810013738 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 71936 72017 + Leu TAG [ENA] ¡û
>CHL1810013742 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 120221 120140 - Leu TAG [ENA] ¡û
>CHL1810059367 MG755798 Stramenopiles Attheya longicornis (MG755798) 119250 119169 - Leu TAG [ENA] ¡û
>CHL1810059441 MG755801 Stramenopiles Triceratium dubium (MG755801) 73439 73521 + Leu TAG [ENA] ¡û
>CHL090102760 EF067921 stramenopiles Thalassiosira pseudonana 72623 72704 + Leu TAG [ENA] ¡û
>CHL090102764 EF067921 stramenopiles Thalassiosira pseudonana 121443 121362 - Leu TAG [ENA] ¡û
>CHL090103376 Z67753 stramenopiles Odontella sinensis 46564 46483 - Leu TAG [ENA] ¡û
Identical group No.184306 (3 seq.)
>WENV183060142 OLHW01020335 [OLHW] seawater metagenome; Sea water 277 194 - Leu TAG [ENA] ¢þ
>CHL1810059335 MG755796 Stramenopiles Guinardia striata (MG755796) 102819 102900 + Leu TAG [ENA] ¡û
>CHL1810059470 MG755802 Stramenopiles Rhizosolenia fallax (MG755802) 98849 98930 + Leu TAG [ENA] ¡û
Identical group No.185407 (4 seq.)
>CHL1810005426 JQ405663 Stramenopiles Saccharina japonica (JQ405663) 81908 81991 + Leu TAG [ENA] ¡û
>CHL1810017327 KP298002 Stramenopiles Undaria pinnatifida (KP298002) 81864 81947 + Leu TAG [ENA] ¡û
>CHL1810018142 KP881334 Stramenopiles Sargassum horneri (KP881334) 72675 72592 - Leu TAG [ENA] ¡û
>CHL1810019008 KR336545 Stramenopiles Costaria costata (KR336545) 81702 81785 + Leu TAG [ENA] ¡û
Identical group No.185410 (12 seq.)
>WENV180014886 FQKF010195057 [FQKF] soil metagenome; Soil 31 112 + Leu TAG [ENA] ¢þ
>WENV180036857 FVAA010388815 [FVAA] soil metagenome; Soil 2 83 + Leu TAG [ENA] ¢þ
>WENV180038839 LLBY010007956 [LLBY] soil metagenome; soil from tomato rhizosphere 618 701 + Leu TAG [ENA] ¢þ
>WENV180041368 LLBZ010108242 [LLBZ] soil metagenome; soil from tomato rhizosphere 3098 3015 - Leu TAG [ENA] ¢þ
>WENV180309961 OBJS01109169 [OBJS] beach sand metagenome; beach sand 149 68 - Leu TAG [ENA] ¢þ
>WENV181322573 OFKT01001405 [OFKT] marine metagenome; sea ice 506 587 + Leu TAG [ENA] ¢þ
>WENV183615434 OOEB01017126 [OOEB] marine metagenome; sea ice 316 235 - Leu TAG [ENA] ¢þ
>WENV183628860 OOGO01042941 [OOGO] marine metagenome; sea ice 553 472 - Leu TAG [ENA] ¢þ
>CHL1810000406 AP011960 Stramenopiles Fistulifera solaris JPCC DA0580 (AP011960) 83880 83799 - Leu TAG [ENA] ¡û
>CHL1810008366 KC509523 Stramenopiles Didymosphenia geminata BCC011 (KC509523) 110608 110527 - Leu TAG [ENA] ¡û
>CHL1810010627 KF733443 Stramenopiles Eunotia naegelii utex FD354 (KF733443) 81864 81945 + Leu TAG [ENA] ¡û
>CHL1810010633 KF733443 Stramenopiles Eunotia naegelii utex FD354 (KF733443) 144722 144641 - Leu TAG [ENA] ¡û
Identical group No.189095 (5 seq.)
>WENV181325874 OFLJ01039874 [OFLJ] seawater metagenome; seawater 9 90 + Leu TAG [ENA] ¢þ
>WENV183619738 OOFQ01041014 [OOFQ] marine metagenome; seawater 9 90 + Leu TAG [ENA] ¢þ
>WENV183620103 OOFR01005923 [OOFR] marine metagenome; seawater 262 343 + Leu TAG [ENA] ¢þ
>WENV183625349 OOGF01015481 [OOGF] marine metagenome; seawater 147 228 + Leu TAG [ENA] ¢þ
>CHL1810059587 MG755806 Stramenopiles Biddulphia tridens (MG755806) 115949 115868 - Leu TAG [ENA] ¡û
Identical group No.189807 (1 seq.)
>CHL1810008338 KC509522 Stramenopiles Cylindrotheca closterium ccmp1855 (KC509522) 146995 146912 - Leu TAG [ENA] ¡û
Identical group No.189823 (2 seq.)
>CHL1810059609 MG755807 Stramenopiles Astrosyne radiata (MG755807) 70155 70236 + Leu TAG [ENA] ¡û
>CHL1810059616 MG755807 Stramenopiles Astrosyne radiata (MG755807) 111091 111010 - Leu TAG [ENA] ¡û
Identical group No.193303 (5 seq.)
>WENV180103815 OAPB01008858 [OAPB] marine metagenome; Sterile flask 182 101 - Leu TAG [ENA] ¢þ
>WENV180374587 OBOK01000917 [OBOK] marine metagenome; seawater 228 309 + Leu TAG [ENA] ¢þ
>WENV180386542 OBPC01012256 [OBPC] marine metagenome; Sterile flask 164 83 - Leu TAG [ENA] ¢þ
>WENV180589532 OCOS01000002 [OCOS] marine metagenome; Sterile flask 20018 20099 + Leu TAG [ENA] ¢þ
>CHL1810013660 KJ958482 Stramenopiles Rhizosolenia imbricata (KJ958482) 84932 84851 - Leu TAG [ENA] ¡û
Identical group No.193317 (2 seq.)
>CHL1810059249 MG755792 Stramenopiles Plagiogramma staurophorum (MG755792) 112424 112505 + Leu TAG [ENA] ¡û
>CHL1810059255 MG755792 Stramenopiles Plagiogramma staurophorum (MG755792) 167160 167079 - Leu TAG [ENA] ¡û
Identical group No.195721 (2 seq.)
>CHL1810024297 KU164871 Stramenopiles Pleurocladia lacustris Sa2 (KU164871) 81085 81168 + Leu TAG [ENA] ¡û
>CHL1810024304 KU164871 Stramenopiles Pleurocladia lacustris Sa2 (KU164871) 137124 137041 - Leu TAG [ENA] ¡û
Identical group No.200806 (2 seq.)
>CHL1810002144 FP102296 Stramenopiles Ectocarpus siliculosus (FP102296) 833 916 + Leu TAG [ENA] ¡û
>CHL1810002165 FP102296 Stramenopiles Ectocarpus siliculosus (FP102296) 59111 59028 - Leu TAG [ENA] ¡û
Identical group No.200809 (2 seq.)
>CHL1810008712 KC598089 Stramenopiles Nannochloropsis limnetica CCMP505 (KC598089) 5894 5813 - Leu TAG [ENA] ¡û
>CHL1810008737 KC598090 Stramenopiles Nannochloropsis oceanica CCMP531 (KC598090) 5894 5813 - Leu TAG [ENA] ¡û
Identical group No.202734 (2 seq.)
>CHL1810008638 KC598085 Stramenopiles Nannochloropsis granulata (KC598085) 5894 5813 - Leu TAG [ENA] ¡û
>CHL1810008663 KC598087 Stramenopiles Nannochloropsis oculata CCMP525 (KC598087) 5892 5811 - Leu TAG [ENA] ¡û
Identical group No.207744 (6 seq.)
>WENV181367152 OFPV01000455 [OFPV] freshwater metagenome; Freshwater Lake 756 675 - Leu TAG [ENA] ¢þ
>WENV181368424 OFQL01004148 [OFQL] freshwater metagenome; Freshwater Lake 413 494 + Leu TAG [ENA] ¢þ
>WENV181369722 OFQP01028719 [OFQP] freshwater metagenome; Freshwater Lake 73 154 + Leu TAG [ENA] ¢þ
>WENV181370420 OFQS01010232 [OFQS] freshwater metagenome; Freshwater Lake 82 163 + Leu TAG [ENA] ¢þ
>CHL1810059530 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 72748 72829 + Leu TAG [ENA] ¡û
>CHL1810059534 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 121248 121167 - Leu TAG [ENA] ¡û
Identical group No.208231 (2 seq.)
>CHL1810006674 KC012944 Stramenopiles Nannochloropsis gaditana 3B (KC012944) 8436 8355 - Leu TAG [ENA] ¡û
>CHL1810008687 KC598088 Stramenopiles Nannochloropsis salina CCMP537 (KC598088) 5912 5831 - Leu TAG [ENA] ¡û
Identical group No.208249 (1 seq.)
>CHL1810059282 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 101434 101515 + Leu TAG [ENA] ¡û
Identical group No.209921 (1 seq.)
>CHL1810002041 FM957154 Stramenopiles Fucus vesiculosus (FM957154) 73399 73316 - Leu TAG [ENA] ¡û
Identical group No.209925 (1 seq.)
>CHL1810008315 KC509521 Stramenopiles Coscinodiscus radiatus ccmp310 (KC509521) 79249 79168 - Leu TAG [ENA] ¡û
Identical group No.209936 (1 seq.)
>CHL1810059315 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 96113 96031 - Leu TAG [ENA] ¡û
Identical group No.209938 (1 seq.)
>CHL1810059636 MG755808 Stramenopiles Acanthoceras zachariasii (MG755808) 72437 72518 + Leu TAG [ENA] ¡û
Identical group No.212990 (1 seq.)
>CHL1810034283 KX619437 Stramenopiles Toxarium undulatum ECT3802 (KX619437) 121818 121737 - Leu TAG [ENA] ¡û
Identical group No.212991 (1 seq.)
>CHL1810042848 KY433579 Stramenopiles Dictyopteris divaricata (KY433579) 73924 73843 - Leu TAG [ENA] ¡û
Identical group No.212995 (1 seq.)
>CHL1810059398 MG755799 Stramenopiles Actinocyclus subtilis (MG755799) 77523 77442 - Leu TAG [ENA] ¡û
Identical group No.215331 (2 seq.)
>CHL1810059500 MG755803 Stramenopiles Psammoneis obaidii (MG755803) 94723 94804 + Leu TAG [ENA] ¡û
>CHL1810059505 MG755803 Stramenopiles Psammoneis obaidii (MG755803) 148111 148030 - Leu TAG [ENA] ¡û
Identical group No.217849 (2 seq.)
>CHL1810008274 KC509520 Stramenopiles Asterionellopsis glacialis ccmp1717 (KC509520) 82805 82888 + Leu TAG [ENA] ¡û
>CHL1810008280 KC509520 Stramenopiles Asterionellopsis glacialis ccmp1717 (KC509520) 135805 135722 - Leu TAG [ENA] ¡û
Identical group No.217860 (1 seq.)
>CHL1810059560 MG755805 Stramenopiles Biddulphia biddulphiana (MG755805) 112316 112235 - Leu TAG [ENA] ¡û
Identical group No.219458 (1 seq.)
>CHL1810008386 KC509524 Stramenopiles Leptocylindrus danicus ccmp1856 (KC509524) 111459 111541 + Leu TAG [ENA] ¡û
Identical group No.221574 (1 seq.)
>CHL1810005309 JQ088178 Stramenopiles Ulnaria acus (JQ088178) 109203 109123 - Leu TAG [ENA] ¡û
Identical group No.222539 (3 seq.)
>WENV180108883 OAPI01015706 [OAPI] marine metagenome; ENVO.00002150 218 136 - Leu TAG [ENA] ¢þ
>WENV180637500 OCRG01030531 [OCRG] marine metagenome; seawater 345 263 - Leu TAG [ENA] ¢þ
>CHL1810013626 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 108799 108717 - Leu TAG [ENA] ¡û
Identical group No.225272 (1 seq.)
>CHL1810059416 MG755800 Stramenopiles Entomoneis sp. (MG755800) 114232 114152 - Leu TAG [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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