tRNA genes clustered and arranged according to each identical group

Stramenopiles

Anticodon = TCT

HIT: 27 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.428362 (1 seq.)
>CHL1810042842 KY433579 Stramenopiles Dictyopteris divaricata (KY433579) 113923 113996 + Arg TCT [ENA] ¡û
Identical group No.467230 (67 seq.)
>WENV180037082 FVAA010587610 [FVAA] soil metagenome; Soil 1 73 + Arg TCT [ENA] ¢þ
>WENV180038606 LLBY010000546 [LLBY] soil metagenome; soil from tomato rhizosphere 32239 32167 - Arg TCT [ENA] ¢þ
>WENV180040784 LLBZ010014679 [LLBZ] soil metagenome; soil from tomato rhizosphere 14946 15018 + Arg TCT [ENA] ¢þ
>WENV180103770 OAPB01005375 [OAPB] marine metagenome; Sterile flask 533 605 + Arg TCT [ENA] ¢þ
>WENV180365016 OBOB01003039 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 587 661 + Arg TCT [ENA] ¢þ
>WENV180374693 OBOK01006624 [OBOK] marine metagenome; seawater 473 401 - Arg TCT [ENA] ¢þ
>WENV180375291 OBOL01001474 [OBOL] marine metagenome; Surface water 1576 1648 + Arg TCT [ENA] ¢þ
>WENV180376469 OBOM01012139 [OBOM] marine metagenome; Seawater 290 216 - Arg TCT [ENA] ¢þ
>WENV180387975 OBPG01020911 [OBPG] marine metagenome; Sterile flask 266 194 - Arg TCT [ENA] ¢þ
>WENV180388544 OBPH01021083 [OBPH] marine metagenome; Sterile flask 228 300 + Arg TCT [ENA] ¢þ
>WENV180388997 OBPI01014030 [OBPI] marine metagenome; Sterile flask 335 407 + Arg TCT [ENA] ¢þ
>WENV180390017 OBPK01013991 [OBPK] marine metagenome; Sterile flask 548 620 + Arg TCT [ENA] ¢þ
>WENV180394636 OBPS01030132 [OBPS] marine metagenome; ENVO:00002010 seawater 156 84 - Arg TCT [ENA] ¢þ
>WENV180399255 OBQG01042527 [OBQG] marine metagenome; ENV:00002010 125 53 - Arg TCT [ENA] ¢þ
>WENV180589546 OCOS01000010 [OCOS] marine metagenome; Sterile flask 5791 5719 - Arg TCT [ENA] ¢þ
>WENV180650559 OCSY01072847 [OCSY] marine metagenome; 30 L Plastic container 116 188 + Arg TCT [ENA] ¢þ
>WENV181092498 OEBK01003768 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 64 136 + Arg TCT [ENA] ¢þ
>WENV181321538 OFKM01009452 [OFKM] marine metagenome; sea ice 120 192 + Arg TCT [ENA] ¢þ
>WENV181322049 OFKP01001608 [OFKP] marine metagenome; sea ice 1090 1162 + Arg TCT [ENA] ¢þ
>WENV181323761 OFKZ01003331 [OFKZ] marine metagenome; sea ice 601 673 + Arg TCT [ENA] ¢þ
>WENV181323906 OFKZ01028858 [OFKZ] marine metagenome; sea ice 349 276 - Arg TCT [ENA] ¢þ
>WENV181324055 OFLB01000425 [OFLB] marine metagenome; seawater 805 733 - Arg TCT [ENA] ¢þ
>WENV181324764 OFLH01003831 [OFLH] marine metagenome; sea ice 710 636 - Arg TCT [ENA] ¢þ
>WENV181329601 OFLX01026663 [OFLX] seawater metagenome; seawater 99 27 - Arg TCT [ENA] ¢þ
>WENV183060140 OLHW01019825 [OLHW] seawater metagenome; Sea water 131 59 - Arg TCT [ENA] ¢þ
>WENV183614856 OOEA01004162 [OOEA] marine metagenome; sea ice 853 779 - Arg TCT [ENA] ¢þ
>WENV183615432 OOEB01016636 [OOEB] marine metagenome; sea ice 73 1 - Arg TCT [ENA] ¢þ
>WENV183616489 OOED01045426 [OOED] marine metagenome; seawater 99 27 - Arg TCT [ENA] ¢þ
>WENV183617603 OOEG01014289 [OOEG] marine metagenome; sea ice 519 591 + Arg TCT [ENA] ¢þ
>WENV183620944 OOFT01000304 [OOFT] marine metagenome; sea ice 2332 2404 + Arg TCT [ENA] ¢þ
>WENV183621098 OOFT01006318 [OOFT] marine metagenome; sea ice 1298 1225 - Arg TCT [ENA] ¢þ
>WENV183621278 OOFT01036931 [OOFT] marine metagenome; sea ice 623 551 - Arg TCT [ENA] ¢þ
>WENV183623260 OOFX01045240 [OOFX] marine metagenome; sea ice 233 161 - Arg TCT [ENA] ¢þ
>WENV183623338 OOFX01080405 [OOFX] marine metagenome; sea ice 454 382 - Arg TCT [ENA] ¢þ
>WENV183623634 OOGA01023372 [OOGA] marine metagenome; sea ice 327 254 - Arg TCT [ENA] ¢þ
>WENV183624941 OOGE01041437 [OOGE] marine metagenome; sea ice 148 76 - Arg TCT [ENA] ¢þ
>WENV183624956 OOGE01045325 [OOGE] marine metagenome; sea ice 439 367 - Arg TCT [ENA] ¢þ
>WENV183625631 OOGG01004608 [OOGG] marine metagenome; sea ice 330 403 + Arg TCT [ENA] ¢þ
>WENV183625730 OOGG01014742 [OOGG] marine metagenome; sea ice 737 665 - Arg TCT [ENA] ¢þ
>WENV183627555 OOGL01011912 [OOGL] marine metagenome; sea ice 709 781 + Arg TCT [ENA] ¢þ
>WENV183628448 OOGN01053461 [OOGN] marine metagenome; sea ice 221 293 + Arg TCT [ENA] ¢þ
>WENV170506566 CEVW01277827 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 260 334 + Arg TCT [ENA] ¢þ
>WENV170533134 CEWO01099466 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 429 503 + Arg TCT [ENA] ¢þ
>WENV170533172 CEWO01103023 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 386 458 + Arg TCT [ENA] ¢þ
>WENV170567068 FLLY01038718 [FLLY] seawater metagenome; seawater 99 27 - Arg TCT [ENA] ¢þ
>WENV170568727 FLMP01071408 [FLMP] seawater metagenome; seawater 870 798 - Arg TCT [ENA] ¢þ
>WENV170639252 JFJP01001711 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 4002 4074 + Arg TCT [ENA] ¢þ
>WENV170813809 MDSW01206453 [MDSW] marine metagenome; seawater 552 626 + Arg TCT [ENA] ¢þ
>WENV170817009 MDSX01041960 [MDSX] marine metagenome; seawater 5077 5149 + Arg TCT [ENA] ¢þ
>CHL1810002657 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 19587 19659 + Arg TCT [ENA] ¡û
>CHL1810005316 JQ088178 Stramenopiles Ulnaria acus (JQ088178) 12792 12719 - Arg TCT [ENA] ¡û
>CHL1810008293 KC509520 Stramenopiles Asterionellopsis glacialis ccmp1717 (KC509520) 6463 6391 - Arg TCT [ENA] ¡û
>CHL1810008317 KC509521 Stramenopiles Coscinodiscus radiatus ccmp310 (KC509521) 42523 42451 - Arg TCT [ENA] ¡û
>CHL1810008425 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 48130 48056 - Arg TCT [ENA] ¡û
>CHL1810010644 KF733443 Stramenopiles Eunotia naegelii utex FD354 (KF733443) 25435 25363 - Arg TCT [ENA] ¡û
>CHL1810013633 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 55778 55706 - Arg TCT [ENA] ¡û
>CHL1810013644 KJ958482 Stramenopiles Rhizosolenia imbricata (KJ958482) 55265 55337 + Arg TCT [ENA] ¡û
>CHL1810013699 KJ958484 Stramenopiles Cerataulina daemon (KJ958484) 8383 8455 + Arg TCT [ENA] ¡û
>CHL1810059290 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 42615 42543 - Arg TCT [ENA] ¡û
>CHL1810059301 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 53284 53356 + Arg TCT [ENA] ¡û
>CHL1810059349 MG755796 Stramenopiles Guinardia striata (MG755796) 5675 5603 - Arg TCT [ENA] ¡û
>CHL1810059400 MG755799 Stramenopiles Actinocyclus subtilis (MG755799) 43093 43021 - Arg TCT [ENA] ¡û
>CHL1810059429 MG755800 Stramenopiles Entomoneis sp. (MG755800) 16680 16608 - Arg TCT [ENA] ¡û
>CHL1810059437 MG755801 Stramenopiles Triceratium dubium (MG755801) 54859 54931 + Arg TCT [ENA] ¡û
>CHL1810059463 MG755802 Stramenopiles Rhizosolenia fallax (MG755802) 56277 56349 + Arg TCT [ENA] ¡û
>CHL090102745 EF067920 stramenopiles Phaeodactylum tricornutum 16962 16890 - Arg TCT [ENA] ¡û
>CHL090103372 Z67753 stramenopiles Odontella sinensis 64846 64773 - Arg TCT [ENA] ¡û
Identical group No.468168 (12 seq.)
>WENV180357443 OBNN01010534 [OBNN] marine metagenome; Coastal water 552 626 + Arg TCT [ENA] ¢þ
>WENV180359126 OBNR01008494 [OBNR] marine metagenome; Seawater_00002010_00002149 223 150 - Arg TCT [ENA] ¢þ
>WENV180367642 OBOE01192932 [OBOE] marine metagenome; ENVO:00002010 151 77 - Arg TCT [ENA] ¢þ
>WENV180367842 OBOF01006078 [OBOF] marine metagenome; ENVO:00002010 361 435 + Arg TCT [ENA] ¢þ
>WENV180368751 OBOG01000010 [OBOG] marine metagenome; seawater 3327 3253 - Arg TCT [ENA] ¢þ
>WENV180591355 OCOV01013914 [OCOV] marine metagenome; ENVO:01000301 511 437 - Arg TCT [ENA] ¢þ
>WENV180594043 OCOY01018796 [OCOY] marine metagenome; ENVO:00002010 586 660 + Arg TCT [ENA] ¢þ
>WENV180650420 OCSY01025104 [OCSY] marine metagenome; 30 L Plastic container 216 290 + Arg TCT [ENA] ¢þ
>CHL1810013671 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 20076 20150 + Arg TCT [ENA] ¡û
>CHL1810013726 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 19721 19795 + Arg TCT [ENA] ¡û
>CHL1810059518 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 19680 19754 + Arg TCT [ENA] ¡û
>CHL090102748 EF067921 stramenopiles Thalassiosira pseudonana 19751 19824 + Arg TCT [ENA] ¡û
Identical group No.478719 (12 seq.)
>WENV170267456 CERG01004531 [CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3279 3351 + Arg TCT [ENA] ¢þ
>WENV170279779 CERR01053350 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1418 1346 - Arg TCT [ENA] ¢þ
>WENV170282044 CERS01129462 [CERS] marine metagenome genome assembly TARA_068_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 176 248 + Arg TCT [ENA] ¢þ
>WENV170284470 CERV01051240 [CERV] marine metagenome genome assembly TARA_068_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1418 1346 - Arg TCT [ENA] ¢þ
>WENV170286513 CERW01102927 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 176 248 + Arg TCT [ENA] ¢þ
>WENV170288400 CERX01092385 [CERX] marine metagenome genome assembly TARA_068_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 134 206 + Arg TCT [ENA] ¢þ
>WENV170400486 CEUE01113899 [CEUE] marine metagenome genome assembly TARA_133_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 104 176 + Arg TCT [ENA] ¢þ
>WENV170509551 CEVY01040528 [CEVY] marine metagenome genome assembly TARA_065_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 101 173 + Arg TCT [ENA] ¢þ
>WENV170515311 CEWB01016098 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1604 1532 - Arg TCT [ENA] ¢þ
>WENV170844142 MDTA01000162 [MDTA] marine metagenome; seawater 1271 1196 - Arg TCT [ENA] ¢þ
>WENV170845769 MDTA01030235 [MDTA] marine metagenome; seawater 3649 3577 - Arg TCT [ENA] ¢þ
>CHL1810002177 GQ231541 Stramenopiles Aureococcus anophagefferens CCMP 1984 (GQ231541) 64611 64683 + Arg TCT [ENA] ¡û
Identical group No.480783 (3 seq.)
>CHL1810005425 JQ405663 Stramenopiles Saccharina japonica (JQ405663) 51870 51943 + Arg TCT [ENA] ¡û
>CHL1810017326 KP298002 Stramenopiles Undaria pinnatifida (KP298002) 51998 52071 + Arg TCT [ENA] ¡û
>CHL1810019007 KR336545 Stramenopiles Costaria costata (KR336545) 52161 52234 + Arg TCT [ENA] ¡û
Identical group No.480787 (2 seq.)
>CHL1810002171 FP102296 Stramenopiles Ectocarpus siliculosus (FP102296) 22018 21944 - Arg TCT [ENA] ¡û
>CHL1810005432 JQ405663 Stramenopiles Saccharina japonica (JQ405663) 117254 117327 + Arg TCT [ENA] ¡û
Identical group No.480790 (1 seq.)
>CHL1810008377 KC509524 Stramenopiles Leptocylindrus danicus ccmp1856 (KC509524) 21972 22044 + Arg TCT [ENA] ¡û
Identical group No.480832 (1 seq.)
>CHL1810019281 KR709240 Stramenopiles Pseudo-nitzschia multiseries (KR709240) 56168 56240 + Arg TCT [ENA] ¡û
Identical group No.492373 (3 seq.)
>WENV180015595 FQKF010951464 [FQKF] soil metagenome; Soil 403 331 - Arg TCT [ENA] ¢þ
>CHL1810002630 GU591327 Alveolata Durinskia baltica CS-38 (GU591327) 16905 16977 + Arg TCT [ENA] ¡û
>CHL1810008373 KC509523 Stramenopiles Didymosphenia geminata BCC011 (KC509523) 16888 16816 - Arg TCT [ENA] ¡û
Identical group No.504508 (1 seq.)
>CHL1810008322 KC509522 Stramenopiles Cylindrotheca closterium ccmp1855 (KC509522) 3491 3565 + Arg TCT [ENA] ¡û
Identical group No.523549 (1 seq.)
>CHL1810000401 AP011960 Stramenopiles Fistulifera solaris JPCC DA0580 (AP011960) 114411 114339 - Arg TCT [ENA] ¡û
Identical group No.523560 (3 seq.)
>WENV180100533 OAOO01000747 [OAOO] marine metagenome; ENVO:00002010 636 564 - Arg TCT [ENA] ¢þ
>WENV180355018 OBNF01003862 [OBNF] marine metagenome; None 81 9 - Arg TCT [ENA] ¢þ
>CHL1810001033 EU168190 Stramenopiles Heterosigma akashiwo NIES 293 (EU168190) 27449 27377 - Arg TCT [ENA] ¡û
Identical group No.523636 (1 seq.)
>CHL1810059267 MG755792 Stramenopiles Plagiogramma staurophorum (MG755792) 6793 6721 - Arg TCT [ENA] ¡û
Identical group No.536364 (1 seq.)
>CHL1810001477 EU912438 Stramenopiles Vaucheria litorea (EU912438) 24795 24720 - Arg TCT [ENA] ¡û
Identical group No.536426 (1 seq.)
>CHL1810024303 KU164871 Stramenopiles Pleurocladia lacustris Sa2 (KU164871) 117275 117349 + Arg TCT [ENA] ¡û
Identical group No.549194 (3 seq.)
>WENV180398078 OBPZ01070603 [OBPZ] marine metagenome; ENVO:00002010 246 320 + Arg TCT [ENA] ¢þ
>WENV170514733 CEWA01140048 [CEWA] marine metagenome genome assembly TARA_038_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 434 360 - Arg TCT [ENA] ¢þ
>CHL1810002590 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 64819 64747 - Arg TCT [ENA] ¡û
Identical group No.561473 (1 seq.)
>CHL1810002159 FP102296 Stramenopiles Ectocarpus siliculosus (FP102296) 139868 139941 + Arg TCT [ENA] ¡û
Identical group No.561485 (6 seq.)
>CHL1810006664 KC012944 Stramenopiles Nannochloropsis gaditana 3B (KC012944) 65666 65738 + Arg TCT [ENA] ¡û
>CHL1810008635 KC598085 Stramenopiles Nannochloropsis granulata (KC598085) 97185 97113 - Arg TCT [ENA] ¡û
>CHL1810008660 KC598087 Stramenopiles Nannochloropsis oculata CCMP525 (KC598087) 96975 96903 - Arg TCT [ENA] ¡û
>CHL1810008685 KC598088 Stramenopiles Nannochloropsis salina CCMP537 (KC598088) 94509 94437 - Arg TCT [ENA] ¡û
>CHL1810008709 KC598089 Stramenopiles Nannochloropsis limnetica CCMP505 (KC598089) 97309 97237 - Arg TCT [ENA] ¡û
>CHL1810008734 KC598090 Stramenopiles Nannochloropsis oceanica CCMP531 (KC598090) 97060 96988 - Arg TCT [ENA] ¡û
Identical group No.581946 (1 seq.)
>CHL1810017333 KP298002 Stramenopiles Undaria pinnatifida (KP298002) 117156 117229 + Arg TCT [ENA] ¡û
Identical group No.592073 (3 seq.)
>WENV170534378 CEWO01214799 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 329 403 + Arg TCT [ENA] ¢þ
>WENV170639237 JFJP01001704 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 4288 4360 + Arg TCT [ENA] ¢þ
>CHL1810034288 KX619437 Stramenopiles Toxarium undulatum ECT3802 (KX619437) 46904 46830 - Arg TCT [ENA] ¡û
Identical group No.611232 (2 seq.)
>CHL1810002038 FM957154 Stramenopiles Fucus vesiculosus (FM957154) 94833 94760 - Arg TCT [ENA] ¡û
>CHL1810018139 KP881334 Stramenopiles Sargassum horneri (KP881334) 94088 94015 - Arg TCT [ENA] ¡û
Identical group No.611234 (1 seq.)
>CHL1810002201 GQ231542 Stramenopiles Aureoumbra lagunensis CCMP 1507 (GQ231542) 46722 46796 + Arg TCT [ENA] ¡û
Identical group No.611329 (1 seq.)
>CHL1810059646 MG755808 Stramenopiles Acanthoceras zachariasii (MG755808) 54646 54574 - Arg TCT [ENA] ¡û
Identical group No.639058 (1 seq.)
>CHL1810059515 MG755803 Stramenopiles Psammoneis obaidii (MG755803) 34886 34814 - Arg TCT [ENA] ¡û
Identical group No.646310 (1 seq.)
>CHL1810000597 AP014625 Stramenopiles Triparma laevis (AP014625) 37287 37361 + Arg TCT [ENA] ¡û
Identical group No.684411 (1 seq.)
>CHL1810059603 MG755807 Stramenopiles Astrosyne radiata (MG755807) 15541 15614 + Arg TCT [ENA] ¡û
Identical group No.754477 (4 seq.)
>WENV183620869 OOFS01068485 [OOFS] marine metagenome; sea ice 164 235 + Arg TCT [ENA] ¢þ
>CHL1810059375 MG755798 Stramenopiles Attheya longicornis (MG755798) 21175 21104 - Arg TCT [ENA] ¡û
>CHL1810059570 MG755805 Stramenopiles Biddulphia biddulphiana (MG755805) 16192 16121 - Arg TCT [ENA] ¡û
>CHL1810059596 MG755806 Stramenopiles Biddulphia tridens (MG755806) 17450 17379 - Arg TCT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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