tRNA genes clustered and arranged according to each identical group

Stromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)

Anticodon = GGA

HIT: 3 Group(s).
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.13395 (33 seq.)
>W1710880605 LMSL01000019 Gammaproteobacteria Frateuria sp. Soil773 [LMSL] 63321 63229 - Ser GGA [ENA] ¡û
>W1711386246 MEFB01000053 Gammaproteobacteria Rhodanobacter sp. SCN 67-45 [MEFB] 8214 8122 - Ser GGA [ENA] ¡û
>W1711506076 MKWC01000004 Gammaproteobacteria Rhodanobacter sp. 68-29 [MKWC] 377553 377645 + Ser GGA [ENA] ¡û
>W1711751265 MUNP01000048 Gammaproteobacteria Rhodanobacter sp. C06 [MUNP] 45316 45224 - Ser GGA [ENA] ¡û
>W131046192 AMSF01000037 Gammaproteobacteria Dyella ginsengisoli LA-4 [AMSF] 55524 55432 - Ser GGA [ENA] ¡û
>WENV180321186 OBKQ01141096 [OBKQ] soil metagenome; Clay 193 101 - Ser GGA [ENA] ¢þ
>WENV181308002 OFIS01000096 [OFIS] sludge metagenome; sludge 29607 29699 + Ser GGA [ENA] ¢þ
>WENV181401366 OFTX01000048 [OFTX] sludge metagenome; sludge 29578 29670 + Ser GGA [ENA] ¢þ
>WENV181402110 OFTY01000126 [OFTY] sludge metagenome; sludge 55206 55114 - Ser GGA [ENA] ¢þ
>ENV08001251 ABMV01071359 stromatolite metagenome; microbial fraction from Highborne Cay microbiolite in the Bahamas 109 17 - Ser GGA [ENA] ¡û
>C191003500 AP018560 Gammaproteobacteria Aerosticca soli Dysh456 [AP018560] 1318230 1318138 - Ser GGA - ¡û
>C191138617 CP035300 Gammaproteobacteria Dyella sp. M7H15-1 [CP035300] 1651844 1651752 - Ser GGA - ¡û
>W1910821917 MWIO01000007 Gammaproteobacteria Rhodanobacter lindaniclasticus DSM 17932 [MWIO] 35087 35179 + Ser GGA [ENA] ¡û
>W1910896608 NFZS01000004 Gammaproteobacteria Dyella jiangningensis FCAV SCS01 [NFZS] 174299 174207 - Ser GGA [ENA] ¡û
>W1911199814 NRDP01000027 Gammaproteobacteria Dyella sp. AD56 [NRDP] 65428 65336 - Ser GGA [ENA] ¡û
>SRA1001306 SRR001063.71573 Stromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151) 109 17 - Ser GGA [SRA]
>W1810485588 QAVX01000012 Gammaproteobacteria Dyella sp. C11 [QAVX] 140280 140372 + Ser GGA [ENA] ¡û
>W1810597232 QGHC01000009 Gammaproteobacteria Fulvimonas soli DSM 14263 [QGHC] 127297 127389 + Ser GGA [ENA] ¡û
>W1810628332 QICJ01000002 Gammaproteobacteria Dyella sp. AtDHG13 [QICJ] 593076 592984 - Ser GGA [ENA] ¡û
>W1810629429 QIRF01000006 Gammaproteobacteria Dyella sp. C9 [QIRF] 4049 3957 - Ser GGA [ENA] ¡û
>W1810783249 QQSY01000001 Gammaproteobacteria Dyella solisilvae DHG54 [QQSY] 453319 453227 - Ser GGA [ENA] ¡û
>W1810785100 QRBE01000008 Gammaproteobacteria Dyella monticola 4G-K06 [QRBE] 165317 165225 - Ser GGA [ENA] ¡û
>C151023715 CP007444 Gammaproteobacteria Dyella jiangningensis SBZ3-12 [CP007444] 1128307 1128399 + Ser GGA [Ensembl] ¡û
>C151039079 CP008884 Gammaproteobacteria Dyella japonica A8 [CP008884] 2548876 2548968 + Ser GGA [Ensembl] ¡û
>W1511305046 JPLA01000003 Gammaproteobacteria Dyella japonica DSM 16301 [JPLA] 93620 93712 + Ser GGA [ENA] ¡û
>W1511686295 LFQR01000066 Gammaproteobacteria Frateuria defendens Hyalesthes Obsoletus HyOG [LFQR] 40447 40539 + Ser GGA [ENA] ¡û
>C161078217 CP014841 Gammaproteobacteria Dyella thiooxydans ATSB10 [CP014841] 577877 577969 + Ser GGA [Ensembl] ¡û
>W121113895 ALOY01000167 Gammaproteobacteria Dyella japonica A8 [ALOY] 63944 64036 + Ser GGA [ENA] ¡û
>W1610742951 LMSL01000019 Gammaproteobacteria Frateuria sp. Soil773 [LMSL] 63321 63229 - Ser GGA [ENA] ¡û
>W1710519822 FNFA01000013 Gammaproteobacteria Dyella jiangningensis [FNFA] 73105 73197 + Ser GGA [ENA] ¡û
>W1710541177 FNYC01000009 Gammaproteobacteria Frateuria terrea [FNYC] 48057 47965 - Ser GGA [ENA] ¡û
>W1710573400 FOXL01000005 Gammaproteobacteria Frateuria terrea [FOXL] 48042 47950 - Ser GGA [ENA] ¡û
>W1710575667 FOZI01000003 Gammaproteobacteria Dyella sp. OK004 [FOZI] 148097 148189 + Ser GGA [ENA] ¡û
Identical group No.49573 (2 seq.)
>ENV08001259 ABMV01095774 stromatolite metagenome; microbial fraction from Highborne Cay microbiolite in the Bahamas 7 96 + Ser GGA [ENA] ¡û
>SRA1001302 SRR001063.56961 Stromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151) 7 96 + Ser GGA [SRA]
Identical group No.90511 (2 seq.)
>ENV08001273 ABMV01151832 stromatolite metagenome; microbial fraction from Highborne Cay microbiolite in the Bahamas 88 3 - Ser GGA [ENA] ¡û
>SRA1001321 SRR001063.125944 Stromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151) 88 3 - Ser GGA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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