tRNA genes clustered and arranged according to each identical group

Stromatolites, microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000135)

Anticodon = GTT

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.414319 (98 seq.)
>W131036227 ALVJ01000018 Cyanobacteriota Calothrix sp. PCC 7103 [ALVJ] 328788 328861 + Asn GTT [ENA] ¡û
>W131036492 ALVS01000067 Cyanobacteriota Fischerella sp. PCC 9339 [ALVS] 827550 827477 - Asn GTT [ENA] ¡û
>W1711577081 MNPM01000004 Cyanobacteriota Mastigocladus laminosus 74 [MNPM] 33741 33814 + Asn GTT [ENA] ¡û
>W1711666522 MRCA01000016 Cyanobacteriota Fischerella major NIES-592 [MRCA] 2676 2749 + Asn GTT [ENA] ¡û
>W1711666614 MRCD01000009 Cyanobacteriota Calothrix sp. HK-06 [MRCD] 35963 35890 - Asn GTT [ENA] ¡û
>C171072573 CP018091 Cyanobacteriota Synechococcus sp. SynAce01 [CP018091] 848527 848598 + Asn GTT - ¡û
>C171097569 CP019636 Cyanobacteriota Nostocales cyanobacterium HT-58-2 [CP019636] 596919 596846 - Asn GTT - ¡û
>C171128301 LT578417 Cyanobacteriota Cyanobium sp. NIES-981 [LT578417] 2860618 2860691 + Asn GTT - ¡û
>W131063241 ANKN01000161 Cyanobacteriota Prochlorothrix hollandica PCC 9006 [ANKN] 21710 21781 + Asn GTT [ENA] ¡û
>C021085 AP008231 Cyanobacteriota Synechococcus elongatus PCC 6301 [AP008231] 1533086 1533157 + Asn GTT [Ensembl] ¡û
>C021164 CP000100 Cyanobacteriota Synechococcus elongatus PCC 7942 = FACHB-805 [CP000100] 87796 87725 - Asn GTT [Ensembl] ¡û
>C025575 CP000393 Actinomycetota Trichodesmium erythraeum [CP000393] 1900476 1900405 - Asn GTT [Ensembl] ¡û
>w013569 AANO01000004 Cyanobacteriota Synechococcus sp. WH 5701 [AANO] 49597 49673 + Asn GTT [ENA] ¡û
>W141021245 AJLJ01000058 Cyanobacteriota Fischerella muscicola SAG 1427-1 = PCC 73103 [AJLJ] 100347 100274 - Asn GTT [ENA] ¡û
>W141021330 AJLK01000184 Cyanobacteriota Fischerella muscicola PCC 7414 [AJLK] 1440 1367 - Asn GTT [ENA] ¡û
>W141021358 AJLL01000058 Cyanobacteriota Fischerella thermalis PCC 7521 [AJLL] 42567 42494 - Asn GTT [ENA] ¡û
>W141021410 AJLM01000114 Cyanobacteriota Chlorogloeopsis fritschii PCC 9212 [AJLM] 2404 2477 + Asn GTT [ENA] ¡û
>W141021434 AJLN01000055 Cyanobacteriota Chlorogloeopsis fritschii PCC 6912 [AJLN] 31312 31239 - Asn GTT [ENA] ¡û
>W141022521 AJTX01001924 Cyanobacteriota Prochlorothrix hollandica PCC 9006 [AJTX] 1604 1533 - Asn GTT [ENA] ¡û
>W141038352 ALVT01000001 Cyanobacteriota Fischerella sp. PCC 9605 [ALVT] 1853625 1853698 + Asn GTT [ENA] ¡û
>W141038505 ALVX01000017 Cyanobacteriota Fischerella sp. PCC 9431 [ALVX] 404443 404516 + Asn GTT [ENA] ¡û
>W141038613 ALWA01000006 Cyanobacteriota cyanobacterium PCC 7702 [ALWA] 8278 8351 + Asn GTT [ENA] ¡û
>WENV180689984 OCZB010366046 [OCZB] metagenome; Oyster Gut Contents 225 153 - Asn GTT [ENA] ¢þ
>W08011058 ABSE01000018 Cyanobacteriota Cyanobium sp. PCC 7001 [ABSE] 21125 21054 - Asn GTT [ENA] ¡û
>WENV181384855 OFRI01016393 [OFRI] wastewater metagenome; Exp Tend VB 90WW 672 599 - Asn GTT [ENA] ¢þ
>ENV08000528 ABME01040923 Stromatolite metagenome; microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico 7 80 + Asn GTT [ENA] ¡û
>WENV170391164 CEUA01207510 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 322 395 + Asn GTT [ENA] ¢þ
>WENV170615348 FUWD012855393 [FUWD] metagenome; unknown 5065 4994 - Asn GTT [ENA] ¢þ
>C181004908 AP018254 Cyanobacteriota Calothrix sp. NIES-3974 [AP018254] 1102159 1102086 - Asn GTT - ¡û
>C181160838 CP028094 Cyanobacteriota Synechocystis sp. IPPAS B-1465 [CP028094] 2093241 2093312 + Asn GTT - ¡û
>C181169682 CP028914 Cyanobacteriota Arthrospira sp. TJSD092 [CP028914] 4319898 4319825 - Asn GTT - ¡û
>C191099551 CP033061 Cyanobacteriota Synechococcus elongatus UTEX 3055 [CP033061] 1067376 1067449 + Asn GTT - ¡û
>W141712562 JMRP01000006 Cyanobacteriota Cyanobium sp. CACIAM 14 [JMRP] 1169 1242 + Asn GTT [ENA] ¡û
>W09100662 AABK04000011 Cyanobacteriota Trichodesmium erythraeum IMS101 [AABK] 15096 15023 - Asn GTT [ENA] ¡û
>W09101125 AADZ01000002 Cyanobacteriota Synechococcus elongatus PCC 7942 [AADZ] 623356 623429 + Asn GTT [ENA] ¡û
>W141805228 JPKF01000001 Cyanobacteriota Calothrix sp. 336/3 [JPKF] 1620995 1621068 + Asn GTT [ENA] ¡û
>W1910842099 NAPS01000002 Cyanobacteriota Westiellopsis prolifica IICB1 [NAPS] 1325469 1325396 - Asn GTT [ENA] ¡û
>W1910896828 NGAA01000013 Cyanobacteriota Fischerella thermalis 111/344/542 [NGAA] 19236 19309 + Asn GTT [ENA] ¡û
>W1910909729 NGZS01000080 Cyanobacteriota Fischerella thermalis WC1110 [NGZS] 51885 51958 + Asn GTT [ENA] ¡û
>W1910909776 NGZT01000061 Cyanobacteriota Fischerella thermalis WC119 [NGZT] 143151 143224 + Asn GTT [ENA] ¡û
>W1910909841 NGZV01000050 Cyanobacteriota Fischerella thermalis WC157 [NGZV] 109274 109347 + Asn GTT [ENA] ¡û
>W1910909876 NGZW01000016 Cyanobacteriota Fischerella thermalis WC341 [NGZW] 17879 17806 - Asn GTT [ENA] ¡û
>W1910909944 NGZX01000294 Cyanobacteriota Fischerella thermalis WC559 [NGZX] 17324 17397 + Asn GTT [ENA] ¡û
>W1910909956 NGZY01000015 Cyanobacteriota Fischerella thermalis WC558 [NGZY] 26145 26072 - Asn GTT [ENA] ¡û
>W1910909993 NGZZ01000018 Cyanobacteriota Fischerella thermalis WC542 [NGZZ] 53319 53246 - Asn GTT [ENA] ¡û
>W1910910048 NHAA01000099 Cyanobacteriota Fischerella thermalis WC538 [NHAA] 109264 109337 + Asn GTT [ENA] ¡û
>W1910910082 NHAB01000080 Cyanobacteriota Fischerella thermalis WC527 [NHAB] 19721 19794 + Asn GTT [ENA] ¡û
>W1910910140 NHAC01000154 Cyanobacteriota Fischerella thermalis WC442 [NHAC] 89938 89865 - Asn GTT [ENA] ¡û
>W1910910160 NHAD01000045 Cyanobacteriota Fischerella thermalis WC441 [NHAD] 22089 22016 - Asn GTT [ENA] ¡û
>W1910910201 NHAE01000098 Cyanobacteriota Fischerella thermalis WC439 [NHAE] 26155 26082 - Asn GTT [ENA] ¡û
>W1910910264 NHAF01000113 Cyanobacteriota Fischerella thermalis WC344 [NHAF] 102153 102080 - Asn GTT [ENA] ¡û
>W1910910271 NHAG01000011 Cyanobacteriota Fischerella thermalis WC249 [NHAG] 10567 10494 - Asn GTT [ENA] ¡û
>W1910910337 NHAH01000093 Cyanobacteriota Fischerella thermalis WC246 [NHAH] 177458 177385 - Asn GTT [ENA] ¡û
>W1910910368 NHAI01000065 Cyanobacteriota Fischerella thermalis WC245 [NHAI] 2873 2946 + Asn GTT [ENA] ¡û
>W1910910398 NHAJ01000113 Cyanobacteriota Fischerella thermalis WC217 [NHAJ] 28619 28546 - Asn GTT [ENA] ¡û
>W1910910450 NHAK01000185 Cyanobacteriota Fischerella thermalis WC213 [NHAK] 92092 92019 - Asn GTT [ENA] ¡û
>W1911070655 NMQA01000050 Cyanobacteriota Fischerella thermalis CCMEE 5268 [NMQA] 377 304 - Asn GTT [ENA] ¡û
>W1911070726 NMQB01000732 Cyanobacteriota Fischerella thermalis CCMEE 5273 [NMQB] 2883 2956 + Asn GTT [ENA] ¡û
>W1911070751 NMQC01000109 Cyanobacteriota Fischerella thermalis CCMEE 5282 [NMQC] 19447 19374 - Asn GTT [ENA] ¡û
>W1911070855 NMQE01000616 Cyanobacteriota Fischerella thermalis CCMEE 5318 [NMQE] 6534 6461 - Asn GTT [ENA] ¡û
>W1911070886 NMQF01000251 Cyanobacteriota Fischerella thermalis CCMEE 5198 [NMQF] 9483 9410 - Asn GTT [ENA] ¡û
>W1911070919 NMQG01000040 Cyanobacteriota Fischerella thermalis BR2B [NMQG] 20486 20413 - Asn GTT [ENA] ¡û
>W1911070971 NMQH01000172 Cyanobacteriota Fischerella thermalis CCMEE 5208 [NMQH] 2676 2749 + Asn GTT [ENA] ¡û
>W1911071009 NMQI01000243 Cyanobacteriota Fischerella thermalis CCMEE 5330 [NMQI] 25786 25713 - Asn GTT [ENA] ¡û
>W1911071042 NMQJ01000230 Cyanobacteriota Fischerella thermalis CCMEE 5205 [NMQJ] 2622 2695 + Asn GTT [ENA] ¡û
>W1911071094 NMQK01000613 Cyanobacteriota Fischerella thermalis CCMEE 5201 [NMQK] 2819 2892 + Asn GTT [ENA] ¡û
>W1911176910 NQKX01000005 Cyanobacteriota Synechococcus sp. MW101C3 [NQKX] 1396 1467 + Asn GTT [ENA] ¡û
>W1911176964 NQKY01000022 Cyanobacteriota Synechococcus sp. BO 8801 [NQKY] 1276 1349 + Asn GTT [ENA] ¡û
>W1911178265 NQME01000311 Cyanobacteriota Fischerella thermalis CCMEE 5194 [NQME] 2663 2736 + Asn GTT [ENA] ¡û
>W1911178308 NQMF01000473 Cyanobacteriota Fischerella thermalis CCMEE 5328 [NQMF] 2390 2463 + Asn GTT [ENA] ¡û
>W1911218643 NRQW01000359 Cyanobacteriota Fischerella muscicola CCMEE 5323 [NRQW] 1484 1411 - Asn GTT [ENA] ¡û
>W1911638476 PVWP01000001 Cyanobacteriota Aphanothece minutissima minutissima CCALA 015 [PVWP] 1256 1329 + Asn GTT [ENA] ¡û
>SRA1000541 SRR001043.86209 Stromatolites, microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000135) 7 80 + Asn GTT [SRA]
>W1810185576 PKGD01000162 Cyanobacteriota Arthrospira sp. O9.13F [PKGD] 6641 6714 + Asn GTT [ENA] ¡û
>W1810387041 PXVC01000178 Cyanobacteriota Synechococcus lacustris Tous [PXVC] 155 82 - Asn GTT [ENA] ¡û
>W1810526284 QCPC01000017 Cyanobacteriota Prochlorococcus sp. AG-436-C13 [QCPC] 31260 31333 + Asn GTT [ENA] ¡û
>C151009145 CP006471 Cyanobacteriota Synechococcus elongatus UTEX 2973 [CP006471] 480533 480606 + Asn GTT [Ensembl] ¡û
>C151081761 CP011382 Cyanobacteriota Calothrix sp. 336/3 [CP011382] 1618996 1619069 + Asn GTT [Ensembl] ¡û
>SRA1028065 SRR035086.249299 454 Sequencing (SRP001807) 293 222 - Asn GTT [SRA]
>SRA1051947 SRR035098.111825 454 Sequencing (SRP001819) 174 245 + Asn GTT [SRA]
>SRA1052036 SRR035098.127718 454 Sequencing (SRP001819) 92 163 + Asn GTT [SRA]
>SRA1052407 SRR035098.197387 454 Sequencing (SRP001819) 215 286 + Asn GTT [SRA]
>SRA1052667 SRR035098.249151 454 Sequencing (SRP001819) 220 291 + Asn GTT [SRA]
>SRA1052804 SRR035098.278745 454 Sequencing (SRP001819) 183 254 + Asn GTT [SRA]
>SRA1053012 SRR035098.317925 454 Sequencing (SRP001819) 124 195 + Asn GTT [SRA]
>SRA1053153 SRR035098.349098 454 Sequencing (SRP001819) 106 177 + Asn GTT [SRA]
>SRA1053313 SRR035098.380189 454 Sequencing (SRP001819) 324 395 + Asn GTT [SRA]
>SRA1053319 SRR035098.381998 454 Sequencing (SRP001819) 215 286 + Asn GTT [SRA]
>SRA1053493 SRR035098.417677 454 Sequencing (SRP001819) 215 286 + Asn GTT [SRA]
>SRA1053497 SRR035098.419449 454 Sequencing (SRP001819) 413 342 - Asn GTT [SRA]
>C11122291 AP012205 Cyanobacteriota Synechocystis sp. PCC 6803 GT-S [AP012205] 2091217 2091288 + Asn GTT [Ensembl] ¡û
>W1511504552 JXIJ01000015 Cyanobacteriota Mastigocladus laminosus UU774 [JXIJ] 33741 33814 + Asn GTT [ENA] ¡û
>W1511564136 LADK01008508 Cyanobacteriota Trichodesmium erythraeum 21-75 [LADK] 5169 5242 + Asn GTT [ENA] ¡û
>W1511573458 LAMW01000052 Cyanobacteriota Trichodesmium thiebautii H9-4 [LAMW] 4301 4230 - Asn GTT [ENA] ¡û
>W1511679458 LFEK01000006 Cyanobacteriota Synechococcus sp. GFB01 [LFEK] 20804 20731 - Asn GTT [ENA] ¡û
>W11181301 AGIZ01000012 Cyanobacteriota Fischerella thermalis JSC-11 [AGIZ] 111578 111651 + Asn GTT [ENA] ¡û
>C161002643 AP017305 Cyanobacteriota Fischerella sp. NIES-3754 [AP017305] 1737356 1737283 - Asn GTT [Ensembl] ¡û
>C131003918 CP003495 Cyanobacteriota Cyanobium gracile PCC 6307 [CP003495] 2852423 2852350 - Asn GTT [Ensembl] ¡û
Identical group No.457184 (2 seq.)
>ENV08000529 ABME01046692 Stromatolite metagenome; microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico 76 3 - Asn GTT [ENA] ¡û
>SRA1000531 SRR001043.41396 Stromatolites, microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000135) 76 3 - Asn GTT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK