tRNA genes clustered and arranged according to each identical group

Synechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)

Anticodon = GCA

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.783135 (33 seq.)
>WENV180115736 OAPT01026935 [OAPT] marine metagenome; seawater 383 312 - Cys GCA [ENA] ¢þ
>WENV180383324 OBOU01036488 [OBOU] marine metagenome; ENV:00002010 222 293 + Cys GCA [ENA] ¢þ
>WENV180384292 OBOX01007195 [OBOX] marine metagenome; Sterile flask 615 544 - Cys GCA [ENA] ¢þ
>WENV180389572 OBPJ01047376 [OBPJ] marine metagenome; seawater 128 57 - Cys GCA [ENA] ¢þ
>WENV180392438 OBPO01072976 [OBPO] marine metagenome; seawater 200 129 - Cys GCA [ENA] ¢þ
>WENV180397808 OBPZ01010881 [OBPZ] marine metagenome; ENVO:00002010 597 526 - Cys GCA [ENA] ¢þ
>WENV180589850 OCOS01024520 [OCOS] marine metagenome; Sterile flask 213 142 - Cys GCA [ENA] ¢þ
>WENV180593494 OCOX01054829 [OCOX] marine metagenome; ENVO:00002010 322 393 + Cys GCA [ENA] ¢þ
>WENV181092681 OEBK01027973 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 253 324 + Cys GCA [ENA] ¢þ
>WENV182556377 OJDG01006438 [OJDG] seawater metagenome; Sea water 176 105 - Cys GCA [ENA] ¢þ
>WENV182559281 OJDO01010475 [OJDO] seawater metagenome; Sea water 350 421 + Cys GCA [ENA] ¢þ
>WENV182566604 OJEL01010256 [OJEL] seawater metagenome; Sea water 479 408 - Cys GCA [ENA] ¢þ
>WENV182575292 OJFU01004210 [OJFU] seawater metagenome; Sea water 108 37 - Cys GCA [ENA] ¢þ
>WENV182589279 OJID01000015 [OJID] seawater metagenome; Sea water 130 59 - Cys GCA [ENA] ¢þ
>WENV170119633 CENJ01156424 [CENJ] marine metagenome genome assembly TARA_009_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1968 1895 - Cys GCA [ENA] ¢þ
>WENV170126837 CENP01155370 [CENP] marine metagenome genome assembly TARA_030_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2202 2131 - Cys GCA [ENA] ¢þ
>WENV170141115 CENX01154065 [CENX] marine metagenome genome assembly TARA_018_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 13329 13402 + Cys GCA [ENA] ¢þ
>WENV170154051 CEOF01165167 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 10311 10384 + Cys GCA [ENA] ¢þ
>WENV170154225 CEOF01183120 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 375 302 - Cys GCA [ENA] ¢þ
>WENV170270863 CERI01122882 [CERI] marine metagenome genome assembly TARA_067_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 78 5 - Cys GCA [ENA] ¢þ
>WENV170275487 CERM01125688 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 145 72 - Cys GCA [ENA] ¢þ
>WENV170314809 CESO01031828 [CESO] marine metagenome genome assembly TARA_093_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 409 482 + Cys GCA [ENA] ¢þ
>WENV170386238 CETY01148405 [CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 323 250 - Cys GCA [ENA] ¢þ
>WENV170503913 CEVV01145820 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 336 265 - Cys GCA [ENA] ¢þ
>WENV170534045 CEWO01184201 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 825 898 + Cys GCA [ENA] ¢þ
>WENV170606664 FUWD010706002 [FUWD] metagenome; unknown 59 132 + Cys GCA [ENA] ¢þ
>WENV170792349 MDSV01098184 [MDSV] marine metagenome; seawater 2684 2613 - Cys GCA [ENA] ¢þ
>WENV170804146 MDSW01042224 [MDSW] marine metagenome; seawater 2566 2639 + Cys GCA [ENA] ¢þ
>WENV170808316 MDSW01112937 [MDSW] marine metagenome; seawater 470 543 + Cys GCA [ENA] ¢þ
>WENV170869456 MDTB01176468 [MDTB] marine metagenome; seawater 3142 3069 - Cys GCA [ENA] ¢þ
>WENV170940762 MDTG01348746 [MDTG] marine metagenome; seawater 3532 3459 - Cys GCA [ENA] ¢þ
>SRA1002636 SRR001663.209778 Synechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219) 6 79 + Cys GCA [SRA]
>WENV038706 AACY021955714 Marine microbial communities from Global Ocean Sampling (GOS) 129 202 + Cys GCA [ENA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK