tRNA genes clustered and arranged according to each identical group

Synechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)

Anticodon = TGA

HIT: 2 Group(s).
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.48090 (11 seq.)
>WENV181308666 OFIT01005772 [OFIT] marine metagenome; seawater 552 463 - Ser TGA [ENA] ¢þ
>WENV170169168 CEOP01167833 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 198 287 + Ser TGA [ENA] ¢þ
>WENV170298441 CESF01119200 [CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 515 604 + Ser TGA [ENA] ¢þ
>WENV170326841 CESU01025202 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1556 1645 + Ser TGA [ENA] ¢þ
>WENV170387302 CETY01392718 [CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 542 453 - Ser TGA [ENA] ¢þ
>WENV170501232 CEVU01092581 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 411 500 + Ser TGA [ENA] ¢þ
>WENV170502933 CEVV01036506 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 199 110 - Ser TGA [ENA] ¢þ
>WENV170506477 CEVW01231037 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 42 131 + Ser TGA [ENA] ¢þ
>WENV170603480 FUWD010311899 [FUWD] metagenome; unknown 7 96 + Ser TGA [ENA] ¢þ
>WENV002597 AACY020072362 Marine microbial communities from Global Ocean Sampling (GOS) 1588 1679 + Ser TGA [ENA]
>SRA1002554 SRR001663.1799 Synechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219) 22 111 + Ser TGA [SRA]
Identical group No.50899 (14 seq.)
>C025068 CP000435 Cyanobacteriota Synechococcus sp. CC9311 [CP000435] 1143485 1143399 - Ser TGA [Ensembl] ¡û
>WENV170298238 CESF01074917 [CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2677 2589 - Ser TGA [ENA] ¢þ
>WENV170788069 MDSV01027182 [MDSV] marine metagenome; seawater 4006 4094 + Ser TGA [ENA] ¢þ
>WENV170819565 MDSX01095171 [MDSX] marine metagenome; seawater 2850 2938 + Ser TGA [ENA] ¢þ
>WENV171002689 NHNJ01135594 [NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier 34 122 + Ser TGA [ENA] ¢þ
>WENV171002811 NHNJ01174666 [NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier 106 194 + Ser TGA [ENA] ¢þ
>SRA1002567 SRR001663.34904 Synechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219) 4 91 + Ser TGA [SRA]
>SRA1002637 SRR001663.209945 Synechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219) 4 91 + Ser TGA [SRA]
>SRA1002675 SRR001663.348017 Synechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219) 97 10 - Ser TGA [SRA]
>W1810515263 QBWV01000012 Unclassified bacterium AG-316-M09 [QBWV] 2341 2427 + Ser TGA [ENA] ¡û
>W1810530049 QCVQ01000009 Cyanobacteriota Synechococcus sp. AG-686-F08 [QCVQ] 37841 37929 + Ser TGA [ENA] ¡û
>ENV09001611 ABVN01005702 Marine metagenome gcontig_contig00001 4 91 + Ser TGA [ENA] ¡û
>W11180834 AGIK01000001 Cyanobacteriota Synechococcus sp. WH 8016 [AGIK] 279393 279306 - Ser TGA [ENA] ¡û
>C161037981 CP011941 Cyanobacteriota Synechococcus sp. WH 8020 [CP011941] 675466 675378 - Ser TGA [Ensembl] ¡û
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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