tRNA genes clustered and arranged according to each identical group

Tampa Bay phage from induction experiment (SRP001112)

Anticodon = TCT

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.265246 (1 seq.)
>SRA1013833 SRR023774.59393 Tampa Bay phage from induction experiment (SRP001112) 13 92 + Arg TCT [SRA]
Identical group No.278070 (87 seq.)
>WENV180360114 OBNT01006614 [OBNT] marine metagenome; Sea Water 220 296 + Arg TCT [ENA] ¢þ
>WENV180363323 OBNY01023959 [OBNY] marine metagenome; ENVO:00002010 553 478 - Arg TCT [ENA] ¢þ
>WENV180369838 OBOH01005198 [OBOH] marine metagenome; ENVO:00002010 389 314 - Arg TCT [ENA] ¢þ
>WENV180378984 OBOP01000108 [OBOP] marine metagenome; water 1556 1481 - Arg TCT [ENA] ¢þ
>WENV180381494 OBOS01000252 [OBOS] marine metagenome; ENVO 00002150 2870 2795 - Arg TCT [ENA] ¢þ
>WENV180590817 OCOU01014681 [OCOU] marine metagenome; Water 451 377 - Arg TCT [ENA] ¢þ
>WENV180594289 OCOZ01004985 [OCOZ] marine metagenome; vv 537 462 - Arg TCT [ENA] ¢þ
>WENV170123445 CENO01044616 [CENO] marine metagenome genome assembly TARA_033_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3488 3564 + Arg TCT [ENA] ¢þ
>WENV170136326 CENV01022592 [CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 209 134 - Arg TCT [ENA] ¢þ
>WENV170137950 CENW01070361 [CENW] marine metagenome genome assembly TARA_032_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 234 158 - Arg TCT [ENA] ¢þ
>WENV170148724 CEOA01020919 [CEOA] marine metagenome genome assembly TARA_032_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 125 198 + Arg TCT [ENA] ¢þ
>WENV170149089 CEOC01000834 [CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 428 503 + Arg TCT [ENA] ¢þ
>WENV170149174 CEOC01006784 [CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 303 228 - Arg TCT [ENA] ¢þ
>WENV170149341 CEOC01021914 [CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1713 1638 - Arg TCT [ENA] ¢þ
>WENV170149805 CEOC01057245 [CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 239 164 - Arg TCT [ENA] ¢þ
>WENV170150133 CEOC01088860 [CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 152 225 + Arg TCT [ENA] ¢þ
>WENV170151499 CEOD01001681 [CEOD] marine metagenome genome assembly TARA_036_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 754 827 + Arg TCT [ENA] ¢þ
>WENV170151587 CEOD01010548 [CEOD] marine metagenome genome assembly TARA_036_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1711 1636 - Arg TCT [ENA] ¢þ
>WENV170156277 CEOI01004125 [CEOI] marine metagenome genome assembly TARA_036_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 103 178 + Arg TCT [ENA] ¢þ
>WENV170157218 CEOJ01044249 [CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1337 1412 + Arg TCT [ENA] ¢þ
>WENV170157323 CEOJ01052482 [CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3560 3636 + Arg TCT [ENA] ¢þ
>WENV170164858 CEON01035007 [CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 405 332 - Arg TCT [ENA] ¢þ
>WENV170165060 CEON01063606 [CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 697 772 + Arg TCT [ENA] ¢þ
>WENV170165071 CEON01064789 [CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 549 624 + Arg TCT [ENA] ¢þ
>WENV170165137 CEON01075740 [CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 195 268 + Arg TCT [ENA] ¢þ
>WENV170165263 CEON01097159 [CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 410 334 - Arg TCT [ENA] ¢þ
>WENV170166125 CEOO01036108 [CEOO] marine metagenome genome assembly TARA_036_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 239 164 - Arg TCT [ENA] ¢þ
>WENV170166547 CEOO01075835 [CEOO] marine metagenome genome assembly TARA_036_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 280 205 - Arg TCT [ENA] ¢þ
>WENV170166916 CEOO01108440 [CEOO] marine metagenome genome assembly TARA_036_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 765 840 + Arg TCT [ENA] ¢þ
>WENV170175539 CEOR01056079 [CEOR] marine metagenome genome assembly TARA_064_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 893 818 - Arg TCT [ENA] ¢þ
>WENV170177446 CEOU01004905 [CEOU] marine metagenome genome assembly TARA_065_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 251 326 + Arg TCT [ENA] ¢þ
>WENV170202352 CEPR01012274 [CEPR] marine metagenome genome assembly TARA_039_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 116 189 + Arg TCT [ENA] ¢þ
>WENV170202377 CEPR01017573 [CEPR] marine metagenome genome assembly TARA_039_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1711 1636 - Arg TCT [ENA] ¢þ
>WENV170205097 CEPT01059519 [CEPT] marine metagenome genome assembly TARA_039_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 125 198 + Arg TCT [ENA] ¢þ
>WENV170205374 CEPT01084257 [CEPT] marine metagenome genome assembly TARA_039_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 152 225 + Arg TCT [ENA] ¢þ
>WENV170213142 CEPX01012344 [CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 446 371 - Arg TCT [ENA] ¢þ
>WENV170215298 CEPX01143334 [CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 313 238 - Arg TCT [ENA] ¢þ
>WENV170217962 CEPY01001297 [CEPY] marine metagenome genome assembly TARA_039_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 98 171 + Arg TCT [ENA] ¢þ
>WENV170236844 CEQM01013612 [CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4412 4487 + Arg TCT [ENA] ¢þ
>WENV170239776 CEQN01067324 [CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 392 317 - Arg TCT [ENA] ¢þ
>WENV170243096 CEQO01119291 [CEQO] marine metagenome genome assembly TARA_078_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 286 211 - Arg TCT [ENA] ¢þ
>WENV170283129 CERT01057208 [CERT] marine metagenome genome assembly TARA_065_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 279 354 + Arg TCT [ENA] ¢þ
>WENV170335512 CESZ01070498 [CESZ] marine metagenome genome assembly TARA_078_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 245 170 - Arg TCT [ENA] ¢þ
>WENV170345697 CETF01056214 [CETF] marine metagenome genome assembly TARA_109_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 325 398 + Arg TCT [ENA] ¢þ
>WENV170470780 CEVG01010425 [CEVG] marine metagenome genome assembly TARA_140_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 103 176 + Arg TCT [ENA] ¢þ
>WENV170471744 CEVG01101625 [CEVG] marine metagenome genome assembly TARA_140_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 259 184 - Arg TCT [ENA] ¢þ
>WENV170472025 CEVG01131659 [CEVG] marine metagenome genome assembly TARA_140_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 263 336 + Arg TCT [ENA] ¢þ
>WENV170472129 CEVG01141778 [CEVG] marine metagenome genome assembly TARA_140_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1597 1672 + Arg TCT [ENA] ¢þ
>WENV170473245 CEVH01017331 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2592 2667 + Arg TCT [ENA] ¢þ
>WENV170505061 CEVW01025299 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 438 513 + Arg TCT [ENA] ¢þ
>WENV170513376 CEWA01000223 [CEWA] marine metagenome genome assembly TARA_038_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 246 171 - Arg TCT [ENA] ¢þ
>WENV170513503 CEWA01008052 [CEWA] marine metagenome genome assembly TARA_038_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1686 1611 - Arg TCT [ENA] ¢þ
>WENV170516777 CEWC01009471 [CEWC] marine metagenome genome assembly TARA_036_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 326 401 + Arg TCT [ENA] ¢þ
>WENV170516847 CEWC01020523 [CEWC] marine metagenome genome assembly TARA_036_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 267 342 + Arg TCT [ENA] ¢þ
>WENV170599213 FUWD010067298 [FUWD] metagenome; unknown 366 442 + Arg TCT [ENA] ¢þ
>WENV170599439 FUWD010074714 [FUWD] metagenome; unknown 182 258 + Arg TCT [ENA] ¢þ
>WENV170599594 FUWD010081441 [FUWD] metagenome; unknown 336 260 - Arg TCT [ENA] ¢þ
>WENV170600920 FUWD010147972 [FUWD] metagenome; unknown 77 4 - Arg TCT [ENA] ¢þ
>WENV170603881 FUWD010343792 [FUWD] metagenome; unknown 10 86 + Arg TCT [ENA] ¢þ
>WENV170608892 FUWD011165715 [FUWD] metagenome; unknown 167 92 - Arg TCT [ENA] ¢þ
>WENV170616837 FUWD012904491 [FUWD] metagenome; unknown 636 712 + Arg TCT [ENA] ¢þ
>WENV170616838 FUWD012904492 [FUWD] metagenome; unknown 152 228 + Arg TCT [ENA] ¢þ
>WENV170617486 FUWD012927882 [FUWD] metagenome; unknown 265 341 + Arg TCT [ENA] ¢þ
>WENV170617488 FUWD012927883 [FUWD] metagenome; unknown 170 246 + Arg TCT [ENA] ¢þ
>WENV170618247 FUWD012959768 [FUWD] metagenome; unknown 171 247 + Arg TCT [ENA] ¢þ
>WENV170624627 FUWD013184028 [FUWD] metagenome; unknown 676 600 - Arg TCT [ENA] ¢þ
>WENV170624684 FUWD013185008 [FUWD] metagenome; unknown 1009 933 - Arg TCT [ENA] ¢þ
>WENV170625438 FUWD013197658 [FUWD] metagenome; unknown 375 450 + Arg TCT [ENA] ¢þ
>WENV170625971 FUWD013210476 [FUWD] metagenome; unknown 1297 1373 + Arg TCT [ENA] ¢þ
>WENV170632909 FUWD013388506 [FUWD] metagenome; unknown 676 600 - Arg TCT [ENA] ¢þ
>WENV170632966 FUWD013389295 [FUWD] metagenome; unknown 1009 933 - Arg TCT [ENA] ¢þ
>WENV170633678 FUWD013400185 [FUWD] metagenome; unknown 375 450 + Arg TCT [ENA] ¢þ
>WENV170634195 FUWD013411905 [FUWD] metagenome; unknown 1297 1373 + Arg TCT [ENA] ¢þ
>WENV170803184 MDSW01026138 [MDSW] marine metagenome; seawater 3259 3184 - Arg TCT [ENA] ¢þ
>WENV170805795 MDSW01070853 [MDSW] marine metagenome; seawater 320 245 - Arg TCT [ENA] ¢þ
>WENV170807357 MDSW01097200 [MDSW] marine metagenome; seawater 486 411 - Arg TCT [ENA] ¢þ
>WENV170821606 MDSY01024830 [MDSY] marine metagenome; seawater 192 117 - Arg TCT [ENA] ¢þ
>WENV170882364 MDTC01148036 [MDTC] marine metagenome; seawater 1961 2036 + Arg TCT [ENA] ¢þ
>WENV170905470 MDTE01025845 [MDTE] marine metagenome; seawater 253 329 + Arg TCT [ENA] ¢þ
>WENV170912447 MDTE01121002 [MDTE] marine metagenome; seawater 470 394 - Arg TCT [ENA] ¢þ
>PHG14100135 FM207411 Myoviridae Synechococcus phage S-RSM4 PH15 (FM207411) 32085 32009 - Arg TCT [ENA] ¡û
>SRA1013894 SRR023774.280328 Tampa Bay phage from induction experiment (SRP001112) 14 89 + Arg TCT [SRA]
>WENV031375 AACY021360805 Marine microbial communities from Global Ocean Sampling (GOS) 693 615 - Arg TCT [ENA]
>WENV036376 AACY021774200 Marine microbial communities from Global Ocean Sampling (GOS) 8 86 + Arg TCT [ENA]
>WENV042504 AACY022243048 Marine microbial communities from Global Ocean Sampling (GOS) 346 270 - Arg TCT [ENA]
>WENV062140 AACY023449053 Marine microbial communities from Global Ocean Sampling (GOS) 495 417 - Arg TCT [ENA]
>WENV072045 AACY023869253 Marine microbial communities from Global Ocean Sampling (GOS) 156 234 + Arg TCT [ENA]
Identical group No.422541 (1 seq.)
>SRA1013825 SRR023774.17294 Tampa Bay phage from induction experiment (SRP001112) 2 78 + Arg TCT [SRA]
Identical group No.422542 (1 seq.)
>SRA1013830 SRR023774.50107 Tampa Bay phage from induction experiment (SRP001112) 6 82 + Arg TCT [SRA]
Identical group No.422543 (2 seq.)
>SRA1013837 SRR023774.63171 Tampa Bay phage from induction experiment (SRP001112) 93 17 - Arg TCT [SRA]
>SRA1013843 SRR023774.80319 Tampa Bay phage from induction experiment (SRP001112) 93 17 - Arg TCT [SRA]
Identical group No.422544 (2 seq.)
>SRA1013853 SRR023774.104172 Tampa Bay phage from induction experiment (SRP001112) 15 91 + Arg TCT [SRA]
>SRA1013858 SRR023774.117898 Tampa Bay phage from induction experiment (SRP001112) 15 91 + Arg TCT [SRA]
Identical group No.422547 (1 seq.)
>SRA1013874 SRR023774.206318 Tampa Bay phage from induction experiment (SRP001112) 32 108 + Arg TCT [SRA]
Identical group No.663547 (10 seq.)
>WENV180358125 OBNP01001590 [OBNP] marine metagenome; seawater 463 535 + Arg TCT [ENA] ¢þ
>WENV180361788 OBNW01001606 [OBNW] marine metagenome; ENVO:00002010, 'SEA WATER 80 152 + Arg TCT [ENA] ¢þ
>WENV180585701 OCOL01073372 [OCOL] marine metagenome; ENVO:00002010 86 159 + Arg TCT [ENA] ¢þ
>WENV180635243 OCRD01001983 [OCRD] marine metagenome; seawater 664 592 - Arg TCT [ENA] ¢þ
>WENV180641466 OCRN01004384 [OCRN] marine metagenome; ENVO:00002010, 'SEA WATER 867 792 - Arg TCT [ENA] ¢þ
>WENV181122424 OEFM01011390 [OEFM] marine metagenome; ENVO:00000569 for seawater 419 491 + Arg TCT [ENA] ¢þ
>WENV170115991 CENG01072189 [CENG] marine metagenome genome assembly TARA_007_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 632 558 - Arg TCT [ENA] ¢þ
>WENV170312481 CESM01269725 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 320 393 + Arg TCT [ENA] ¢þ
>WENV170599626 FUWD010083250 [FUWD] metagenome; unknown 57 131 + Arg TCT [ENA] ¢þ
>SRA1013889 SRR023774.270889 Tampa Bay phage from induction experiment (SRP001112) 81 8 - Arg TCT [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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