This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Tenericutes
Anticodon = GGA
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.31208 (9 seq.)
>W131185092
ARTL01000018
Mycoplasmatota
Mesomycoplasma hyorhinis ATCC 17981 [ARTL]
8481
8571
+
Ser
GGA
[ENA]
¡û
>C171051507
CP016817
Mycoplasmatota
Mesomycoplasma hyorhinis MDBK-IPV [CP016817]
180241
180331
+
Ser
GGA
-
¡û
>PL191001714
LR214949
Tenericutes
Mycoplasma hyorhinis NCTC10121 plasmid:3 (LR214949)
180009
180099
+
Ser
GGA
[ENA]
¡û
>C191224779
LS991950
Mycoplasmatota
Mesomycoplasma hyorhinis NCTC10130 [LS991950]
179995
180085
+
Ser
GGA
-
¡û
>C141009319
CP006849
Mycoplasmatota
Mesomycoplasma hyorhinis DBS 1050 [CP006849]
180197
180287
+
Ser
GGA
[Ensembl]
¡û
>C10109435
CP002170
Mycoplasmatota
Mesomycoplasma hyorhinis HUB-1 [CP002170]
179834
179924
+
Ser
GGA
[Ensembl]
¡û
>C11114519
CP002669
Mycoplasmatota
Mesomycoplasma hyorhinis MCLD [CP002669]
295133
295043
-
Ser
GGA
[Ensembl]
¡û
>C121009146
CP003231
Mycoplasmatota
Mesomycoplasma hyorhinis GDL-1 [CP003231]
180197
180287
+
Ser
GGA
[Ensembl]
¡û
>C131009702
CP003914
Mycoplasmatota
Mesomycoplasma hyorhinis SK76 [CP003914]
180046
180136
+
Ser
GGA
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK