tRNA genes clustered and arranged according to each identical group

The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)

Anticodon = CAA

HIT: 25 Group(s).
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.113242 (11 seq.)
>W1711421887 MIAG01000002 Bacteroidota Sphingobacteriia bacterium RIFOXYC2_FULL_35_18 [MIAG] 336168 336254 + Leu CAA [ENA] ¡û
>W1711421914 MIAH01000002 Bacteroidota Sphingobacteriia bacterium RIFOXYD2_FULL_35_12 [MIAH] 95 9 - Leu CAA [ENA] ¡û
>WENV181401672 OFTX01002397 [OFTX] sludge metagenome; sludge 2776 2692 - Leu CAA [ENA] ¢þ
>WENV170961506 MLJW01000098 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 26513 26427 - Leu CAA [ENA] ¢þ
>SRA1003551 SRR002327.21762 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 27 111 + Leu CAA [SRA]
>W1810239575 PPSL01000005 Bacteroidota Flavipsychrobacter stenotrophus RB1R16 [PPSL] 10444 10528 + Leu CAA [ENA] ¡û
>W1810682125 QKTW01000017 Bacteroidota Taibaiella soli R1-15 [QKTW] 164969 164885 - Leu CAA [ENA] ¡û
>W1510019464 BBWV01000003 Bacteroidota Flavihumibacter petaseus NBRC 106054 [BBWV] 934359 934273 - Leu CAA [ENA] ¡û
>W1511300702 JPHF01000002 Bacteroidota Flavihumibacter sp. ZG627 [JPHF] 767927 768013 + Leu CAA [ENA] ¡û
>W1511387765 JSVC01000009 Bacteroidota Flavihumibacter solisilvae 3·î3Æü [JSVC] 44311 44395 + Leu CAA [ENA] ¡û
>W1710544821 FOBB01000005 Bacteroidota Chitinophaga rupis [FOBB] 84561 84645 + Leu CAA [ENA] ¡û
Identical group No.115871 (8 seq.)
>WENV181377828 OFRA01036005 [OFRA] wastewater metagenome; Lake Maggiore Verbania 242 158 - Leu CAA [ENA] ¢þ
>SRA1003404 SRR002326.440401 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 107 21 - Leu CAA [SRA]
>SRA1003461 SRR002326.480277 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 138 224 + Leu CAA [SRA]
>SRA1003474 SRR002326.489886 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 149 233 + Leu CAA [SRA]
>SRA1003924 SRR002328.39757 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 151 237 + Leu CAA [SRA]
>SRA1004136 SRR002328.166533 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 147 231 + Leu CAA [SRA]
>SRA1004163 SRR002328.178206 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 224 140 - Leu CAA [SRA]
>SRA1004172 SRR002328.181759 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 152 238 + Leu CAA [SRA]
Identical group No.123075 (2 seq.)
>SRA1003409 SRR002326.449027 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 25 110 + Leu CAA [SRA]
>SRA1004275 SRR002328.241938 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 111 27 - Leu CAA [SRA]
Identical group No.123077 (1 seq.)
>SRA1003426 SRR002326.457099 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 26 112 + Leu CAA [SRA]
Identical group No.129522 (1 seq.)
>SRA1003664 SRR002327.104519 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 28 112 + Leu CAA [SRA]
Identical group No.129525 (1 seq.)
>SRA1003856 SRR002327.236809 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 89 3 - Leu CAA [SRA]
Identical group No.160423 (1 seq.)
>SRA1002828 SRR002326.40852 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 164 249 + Leu CAA [SRA]
Identical group No.160424 (6 seq.)
>W1710860339 LMCU01000001 Actinomycetota Leifsonia sp. Root112D2 [LMCU] 2802502 2802417 - Leu CAA [ENA] ¡û
>WENV180016692 FSVT01000623 [FSVT] metagenome; soil 1903 1820 - Leu CAA [ENA] ¢þ
>WENV180017379 FSWU01000431 [FSWU] metagenome; soil 17232 17315 + Leu CAA [ENA] ¢þ
>SRA1002891 SRR002326.79146 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 157 72 - Leu CAA [SRA]
>SRA1003385 SRR002326.429462 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 141 56 - Leu CAA [SRA]
>W1610722685 LMCU01000001 Actinomycetota Leifsonia sp. Root112D2 [LMCU] 2802502 2802417 - Leu CAA [ENA] ¡û
Identical group No.180404 (15 seq.)
>W1710861747 LMDW01000001 Betaproteobacteria Variovorax sp. Root411 [LMDW] 470533 470449 - Leu CAA [ENA] ¡û
>C017344 CP000316 Betaproteobacteria Polaromonas sp. JS666 [CP000316] 3934264 3934348 + Leu CAA [Ensembl] ¡û
>C08007658 CP000316 Betaproteobacteria Polaromonas sp. JS666 [CP000316] 3934264 3934348 + Leu CAA [Ensembl] ¡û
>W141265970 CCJP01000005 Betaproteobacteria Polaromonas sp. CG9_12 CJ2 [CCJP] 894598 894682 + Leu CAA [ENA] ¡û
>WENV183621157 OOFT01012111 [OOFT] marine metagenome; sea ice 35 119 + Leu CAA [ENA] ¢þ
>W141565111 JIBH01000001 Betaproteobacteria Polaromonas sp. EUR3 1.2.1 [JIBH] 2782261 2782345 + Leu CAA [ENA] ¡û
>W09101637 AAFQ02000012 Betaproteobacteria Polaromonas sp. JS666 [AAFQ] 124024 123940 - Leu CAA [ENA] ¡û
>W141695469 JMDZ01000005 Betaproteobacteria Polaromonas glacialis [JMDZ] 406981 407065 + Leu CAA [ENA] ¡û
>W141695472 JMDZ01000006 Betaproteobacteria Polaromonas glacialis [JMDZ] 1093 1177 + Leu CAA [ENA] ¡û
>W1910699883 MERZ01000186 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_61_11 [MERZ] 950 866 - Leu CAA [ENA] ¡û
>W1910859541 NBZW01000008 Betaproteobacteria Polaromonas sp. AET17H-212 [NBZW] 63690 63606 - Leu CAA [ENA] ¡û
>SRA1002973 SRR002326.130816 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 103 19 - Leu CAA [SRA]
>SRA1003581 SRR002327.44339 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 109 193 + Leu CAA [SRA]
>WENV058177 AACY023320136 Marine microbial communities from Global Ocean Sampling (GOS) 168 82 - Leu CAA [ENA]
>W1610724093 LMDW01000001 Betaproteobacteria Variovorax sp. Root411 [LMDW] 470533 470449 - Leu CAA [ENA] ¡û
Identical group No.186266 (20 seq.)
>W1711229606 LXYP01000003 Alphaproteobacteria Sphingomonadales bacterium EhC05 [LXYP] 207904 207988 + Leu CAA [ENA] ¡û
>W1712105789 NISJ01000011 Alphaproteobacteria Sphingopyxis witflariensis [NISJ] 220 136 - Leu CAA [ENA] ¡û
>W1712105830 NISK01000003 Alphaproteobacteria Sphingopyxis bauzanensis [NISK] 763734 763818 + Leu CAA [ENA] ¡û
>WENV182568050 OJEP01020344 [OJEP] seawater metagenome; Sea water 438 522 + Leu CAA [ENA] ¢þ
>WENV182585824 OJHI01018647 [OJHI] seawater metagenome; Sea water 508 424 - Leu CAA [ENA] ¢þ
>WENV183673550 ORJL011290369 [ORJL] groundwater metagenome; groundwater 1620 1536 - Leu CAA [ENA] ¢þ
>WENV183688836 ORMF011352132 [ORMF] groundwater metagenome; groundwater 464 380 - Leu CAA [ENA] ¢þ
>WENV183724655 PJQE01041059 [PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane 328 412 + Leu CAA [ENA] ¢þ
>WENV183747902 PPFU01002416 [PPFU] hypolithon metagenome; Antarctic Hypolithon 1154 1070 - Leu CAA [ENA] ¢þ
>WENV170555552 CXWL01001042 [CXWL] groundwater metagenome; biofilm material 13263 13347 + Leu CAA [ENA] ¢þ
>WENV170578034 FSSH01006901 [FSSH] freshwater metagenome; drinking water 6535 6451 - Leu CAA [ENA] ¢þ
>WENV170668192 LADL02001758 [LADL] rock porewater metagenome; Opalinus Clay rock porewater BRC-3 borehole 3219 3303 + Leu CAA [ENA] ¢þ
>WENV170668207 LADL02001855 [LADL] rock porewater metagenome; Opalinus Clay rock porewater BRC-3 borehole 9724 9808 + Leu CAA [ENA] ¢þ
>W1910744329 MIAL01000010 Alphaproteobacteria Sphingopyxis sp. RIFCSPHIGHO2_01_FULL_65_24 [MIAL] 35029 35113 + Leu CAA [ENA] ¡û
>SRA1002822 SRR002326.37204 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 103 187 + Leu CAA [SRA]
>SRA1002921 SRR002326.102237 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 116 32 - Leu CAA [SRA]
>SRA1003282 SRR002326.365005 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 80 164 + Leu CAA [SRA]
>C161043649 CP012700 Alphaproteobacteria Sphingopyxis macrogoltabida EY-1 [CP012700] 1468737 1468821 + Leu CAA [Ensembl] ¡û
>W121084339 AKIB01000073 Alphaproteobacteria Sphingobium xenophagum QYY [AKIB] 144 228 + Leu CAA [ENA] ¡û
>W1611013476 LXYP01000003 Alphaproteobacteria Sphingomonadales bacterium EhC05 [LXYP] 207904 207988 + Leu CAA [ENA] ¡û
Identical group No.187754 (3 seq.)
>SRA1003800 SRR002327.190086 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 65 149 + Leu CAA [SRA]
>SRA1004190 SRR002328.191201 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 154 238 + Leu CAA [SRA]
>W1511432408 JUGM01000017 Betaproteobacteria Methylibium sp. CF059 [JUGM] 14416 14332 - Leu CAA [ENA] ¡û
Identical group No.190261 (1 seq.)
>SRA1002934 SRR002326.108314 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 102 18 - Leu CAA [SRA]
Identical group No.190267 (1 seq.)
>SRA1003258 SRR002326.346142 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 132 48 - Leu CAA [SRA]
Identical group No.190270 (1 seq.)
>SRA1003362 SRR002326.412453 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 146 62 - Leu CAA [SRA]
Identical group No.190271 (2 seq.)
>W1911647486 QAJN01000011 Betaproteobacteria Paucibacter sp. KBW04 [QAJN] 51104 51188 + Leu CAA [ENA] ¡û
>SRA1003378 SRR002326.423818 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 99 15 - Leu CAA [SRA]
Identical group No.196037 (1 seq.)
>SRA1003541 SRR002327.12242 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 105 189 + Leu CAA [SRA]
Identical group No.205136 (2 seq.)
>WENV183749507 PPFU01177702 [PPFU] hypolithon metagenome; Antarctic Hypolithon 971 887 - Leu CAA [ENA] ¢þ
>SRA1003922 SRR002328.37308 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 44 128 + Leu CAA [SRA]
Identical group No.205137 (2 seq.)
>SRA1003925 SRR002328.39907 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 139 223 + Leu CAA [SRA]
>SRA1004080 SRR002328.136666 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 139 223 + Leu CAA [SRA]
Identical group No.205140 (1 seq.)
>SRA1004111 SRR002328.153310 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 103 19 - Leu CAA [SRA]
Identical group No.220689 (1 seq.)
>SRA1003360 SRR002326.411503 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 55 136 + Leu CAA [SRA]
Identical group No.222296 (2 seq.)
>SRA1003627 SRR002327.73282 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 199 116 - Leu CAA [SRA]
>SRA1003666 SRR002327.106293 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 193 110 - Leu CAA [SRA]
Identical group No.222304 (3 seq.)
>SRA1003926 SRR002328.40641 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 116 33 - Leu CAA [SRA]
>W1610614654 LGIC01000006 Alphaproteobacteria Cypionkella psychrotolerans [LGIC] 846 763 - Leu CAA [ENA] ¡û
>W1710735788 LGIC01000006 Alphaproteobacteria Cypionkella psychrotolerans [LGIC] 846 763 - Leu CAA [ENA] ¡û
Identical group No.231224 (1 seq.)
>SRA1003972 SRR002328.66704 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 103 185 + Leu CAA [SRA]
Identical group No.233130 (1 seq.)
>SRA1004023 SRR002328.99967 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 120 41 - Leu CAA [SRA]
Identical group No.321237 (1 seq.)
>SRA1003217 SRR002326.312723 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 16 92 + Leu CAA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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