tRNA genes clustered and arranged according to each identical group

The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)

Anticodon = GGA

HIT: 20 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.22543 (1 seq.)
>SRA1003110 SRR002326.204961 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 110 201 + Ser GGA [SRA]
Identical group No.26597 (1 seq.)
>SRA1004141 SRR002328.168169 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 137 228 + Ser GGA [SRA]
Identical group No.34520 (1 seq.)
>SRA1002985 SRR002326.136529 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 46 136 + Ser GGA [SRA]
Identical group No.34523 (1 seq.)
>SRA1003143 SRR002326.239915 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 114 204 + Ser GGA [SRA]
Identical group No.34524 (6 seq.)
>WENV180343634 OBLK01051810 [OBLK] soil metagenome; Clay 202 292 + Ser GGA [ENA] ¢þ
>WENV170994182 MWWD01026860 [MWWD] soil metagenome; MS2-2 sample; Antarctic (ecotone) soil 91 181 + Ser GGA [ENA] ¢þ
>SRA1003198 SRR002326.299386 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 74 164 + Ser GGA [SRA]
>SRA1003611 SRR002327.67714 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 189 99 - Ser GGA [SRA]
>SRA1003718 SRR002327.143032 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 237 147 - Ser GGA [SRA]
>W1511324683 JQFJ01000002 Alphaproteobacteria Sphingopyxis sp. MWB1 [JQFJ] 173324 173234 - Ser GGA [ENA] ¡û
Identical group No.37026 (1 seq.)
>SRA1003734 SRR002327.150987 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 158 68 - Ser GGA [SRA]
Identical group No.37028 (1 seq.)
>SRA1003767 SRR002327.170743 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 204 291 + Ser GGA [SRA]
Identical group No.52729 (2 seq.)
>SRA1002997 SRR002326.145056 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 147 58 - Ser GGA [SRA]
>SRA1004006 SRR002328.91900 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 115 204 + Ser GGA [SRA]
Identical group No.52731 (1 seq.)
>SRA1003047 SRR002326.170029 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 45 134 + Ser GGA [SRA]
Identical group No.52733 (4 seq.)
>W141565129 JIBH01000001 Betaproteobacteria Polaromonas sp. EUR3 1.2.1 [JIBH] 1826904 1826815 - Ser GGA [ENA] ¡û
>W1910699886 MERZ01000203 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_61_11 [MERZ] 153 242 + Ser GGA [ENA] ¡û
>SRA1003123 SRR002326.220178 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 60 149 + Ser GGA [SRA]
>SRA1003559 SRR002327.31702 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 98 9 - Ser GGA [SRA]
Identical group No.52739 (1 seq.)
>SRA1003391 SRR002326.432974 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 94 5 - Ser GGA [SRA]
Identical group No.56655 (1 seq.)
>SRA1003788 SRR002327.186129 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 158 69 - Ser GGA [SRA]
Identical group No.56656 (1 seq.)
>SRA1003797 SRR002327.189487 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 259 170 - Ser GGA [SRA]
Identical group No.56657 (14 seq.)
>WENV181379392 OFRD01001083 [OFRD] wastewater metagenome; Exp Tend CN 100WW 2673 2760 + Ser GGA [ENA] ¢þ
>WENV181384106 OFRH01017887 [OFRH] wastewater metagenome; Exp Tend NO 100WW 118 31 - Ser GGA [ENA] ¢þ
>WENV183621230 OOFT01023009 [OOFT] marine metagenome; sea ice 564 651 + Ser GGA [ENA] ¢þ
>WENV170559849 CXWL01161303 [CXWL] groundwater metagenome; biofilm material 1545 1634 + Ser GGA [ENA] ¢þ
>W1810072199 PEFE01000001 Bacteroidota Flavobacterium sp. 11 [PEFE] 684981 684894 - Ser GGA [ENA] ¡û
>W1810121187 PHUE01000001 Bacteroidota Flavobacterium sp. 5 [PHUE] 1728787 1728700 - Ser GGA [ENA] ¡û
>SRA1003836 SRR002327.220806 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 223 136 - Ser GGA [SRA]
>W1810722608 QNUX01000011 Bacteroidota Flavobacterium psychrolimnae LMG 22018 [QNUX] 57597 57684 + Ser GGA [ENA] ¡û
>W1810723020 QNVY01000001 Bacteroidota Flavobacterium petrolei Kopri-42 [QNVY] 240937 240850 - Ser GGA [ENA] ¡û
>W1511390938 JSYM01000004 Bacteroidota Flavobacterium sp. AED [JSYM] 59167 59078 - Ser GGA [ENA] ¡û
>W1710533469 FNRD01000002 Bacteroidota Flavobacterium gillisiae [FNRD] 66473 66384 - Ser GGA [ENA] ¡û
>W1710548166 FODN01000007 Bacteroidota Flavobacterium sinopsychrotolerans [FODN] 168760 168849 + Ser GGA [ENA] ¡û
>W1710551340 FOFZ01000011 Bacteroidota Flavobacterium frigoris [FOFZ] 40918 41007 + Ser GGA [ENA] ¡û
>W1710592412 FRCL01000002 Bacteroidota Flavobacterium xinjiangense [FRCL] 128825 128912 + Ser GGA [ENA] ¡û
Identical group No.56658 (1 seq.)
>SRA1003845 SRR002327.227510 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 204 115 - Ser GGA [SRA]
Identical group No.63110 (1 seq.)
>SRA1003917 SRR002328.33775 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 82 169 + Ser GGA [SRA]
Identical group No.93356 (1 seq.)
>SRA1003105 SRR002326.200485 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 238 150 - Ser GGA [SRA]
Identical group No.97222 (6 seq.)
>W1710853229 LLWK01000038 Bacteroidota Flavobacterium sp. TAB 87 [LLWK] 627783 627868 + Ser GGA [ENA] ¡û
>W131225428 AUDO01000009 Bacteroidota Flavobacterium frigidarium DSM 17623 [AUDO] 37045 36958 - Ser GGA [ENA] ¡û
>SRA1003537 SRR002327.6983 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 163 78 - Ser GGA [SRA]
>W1610716353 LLWK01000038 Bacteroidota Flavobacterium sp. TAB 87 [LLWK] 627783 627868 + Ser GGA [ENA] ¡û
>W1710585196 FQWE01000002 Bacteroidota Flavobacterium segetis [FQWE] 352217 352130 - Ser GGA [ENA] ¡û
>W1710585244 FQWF01000008 Bacteroidota Flavobacterium micromati [FQWF] 175054 175141 + Ser GGA [ENA] ¡û
Identical group No.97228 (1 seq.)
>SRA1003676 SRR002327.115536 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 213 126 - Ser GGA [SRA]
Identical group No.103388 (1 seq.)
>SRA1004229 SRR002328.212721 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 118 205 + Ser GGA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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