tRNA genes clustered and arranged according to each identical group

The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)

Anticodon = TAA

HIT: 31 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.9807 (1 seq.)
>SRA1003595 SRR002327.56540 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 262 169 - Leu TAA [SRA]
Identical group No.10782 (1 seq.)
>SRA1004155 SRR002328.175367 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 100 193 + Leu TAA [SRA]
Identical group No.14306 (2 seq.)
>SRA1002960 SRR002326.125962 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 32 124 + Leu TAA [SRA]
>SRA1004118 SRR002328.156956 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 233 141 - Leu TAA [SRA]
Identical group No.15443 (1 seq.)
>SRA1003815 SRR002327.200990 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 211 119 - Leu TAA [SRA]
Identical group No.22547 (1 seq.)
>SRA1003218 SRR002326.312723 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 101 192 + Leu TAA [SRA]
Identical group No.26595 (2 seq.)
>W1910698849 MEPU01000001 Bdellovibrionota Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29 [MEPU] 256 165 - Leu TAA [ENA] ¡û
>SRA1003977 SRR002328.68423 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 174 264 + Leu TAA [SRA]
Identical group No.40631 (1 seq.)
>SRA1004249 SRR002328.222535 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 119 207 + Leu TAA [SRA]
Identical group No.76317 (1 seq.)
>SRA1003078 SRR002326.184593 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 196 284 + Leu TAA [SRA]
Identical group No.76318 (1 seq.)
>SRA1003483 SRR002326.494426 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 141 53 - Leu TAA [SRA]
Identical group No.78506 (1 seq.)
>SRA1003656 SRR002327.100762 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 147 235 + Leu TAA [SRA]
Identical group No.78507 (1 seq.)
>SRA1003759 SRR002327.167585 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 172 260 + Leu TAA [SRA]
Identical group No.78508 (1 seq.)
>SRA1003840 SRR002327.221885 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 211 125 - Leu TAA [SRA]
Identical group No.82023 (1 seq.)
>SRA1003920 SRR002328.36709 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 171 83 - Leu TAA [SRA]
Identical group No.82024 (1 seq.)
>SRA1004274 SRR002328.241475 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 64 152 + Leu TAA [SRA]
Identical group No.90173 (82 seq.)
>W1710905381 LNNF01000169 Bacteroidota Flavobacterium psychrophilum [LNNF] 95216 95303 + Leu TAA [ENA] ¡û
>W1710914548 LNTP01000157 Bacteroidota Flavobacterium psychrophilum [LNTP] 41606 41693 + Leu TAA [ENA] ¡û
>W1710914591 LNTQ01000128 Bacteroidota Flavobacterium psychrophilum [LNTQ] 7760 7673 - Leu TAA [ENA] ¡û
>W1711053998 LRTL01000005 Bacteroidota Flavobacterium psychrophilum [LRTL] 68975 69062 + Leu TAA [ENA] ¡û
>W1711431518 MIJV01000033 Bacteroidota Flavobacterium psychrophilum [MIJV] 63240 63153 - Leu TAA [ENA] ¡û
>W1711712444 MTBY01000007 Bacteroidota Flavobacterium psychrophilum [MTBY] 128638 128551 - Leu TAA [ENA] ¡û
>W1711712479 MTBZ01000007 Bacteroidota Flavobacterium psychrophilum [MTBZ] 50489 50402 - Leu TAA [ENA] ¡û
>W1711712570 MTCB01000005 Bacteroidota Flavobacterium psychrophilum [MTCB] 73850 73937 + Leu TAA [ENA] ¡û
>W1711712600 MTCC01000003 Bacteroidota Flavobacterium psychrophilum [MTCC] 96957 96870 - Leu TAA [ENA] ¡û
>W1711712658 MTCD01000319 Bacteroidota Flavobacterium psychrophilum [MTCD] 11052 11139 + Leu TAA [ENA] ¡û
>C009536 AM398681 Bacteroidota Flavobacterium psychrophilum JIP02/86 [AM398681] 480752 480665 - Leu TAA [Ensembl] ¡û
>C181220293 LT670843 Bacteroidota Flavobacterium psychrophilum OSU THCO2-90 [LT670843] 483469 483384 - Leu TAA - ¡û
>W1910184579 BJSV01000018 Bacteroidota Flavobacterium psychrophilum NNS1-1804 [BJSV] 1318 1233 - Leu TAA [ENA] ¡û
>W1910184635 BJSW01000057 Bacteroidota Flavobacterium psychrophilum NNS2-1804 [BJSW] 1318 1233 - Leu TAA [ENA] ¡û
>W1910184652 BJSX01000011 Bacteroidota Flavobacterium psychrophilum NNS4-1804 [BJSX] 73097 73012 - Leu TAA [ENA] ¡û
>W1910184686 BJSY01000009 Bacteroidota Flavobacterium psychrophilum NNS5-1804 [BJSY] 38393 38478 + Leu TAA [ENA] ¡û
>W1910184721 BJSZ01000004 Bacteroidota Flavobacterium psychrophilum NNS6-1804 [BJSZ] 1318 1233 - Leu TAA [ENA] ¡û
>W1910184758 BJTA01000005 Bacteroidota Flavobacterium psychrophilum NNS7-1804 [BJTA] 1318 1233 - Leu TAA [ENA] ¡û
>W1910184867 BJTD01000007 Bacteroidota Flavobacterium psychrophilum KKAC-1706 [BJTD] 69852 69767 - Leu TAA [ENA] ¡û
>W1910184924 BJTE01000033 Bacteroidota Flavobacterium psychrophilum KKOK-1706 [BJTE] 1220 1135 - Leu TAA [ENA] ¡û
>W1910184970 BJTF01000066 Bacteroidota Flavobacterium psychrophilum KHIR-1705 [BJTF] 38392 38477 + Leu TAA [ENA] ¡û
>W1910502977 FYBY01000021 Bacteroidota Flavobacterium psychrophilum CH8 [FYBY] 63145 63060 - Leu TAA [ENA] ¡û
>W1910503037 FYBZ01000068 Bacteroidota Flavobacterium psychrophilum FRGDSA 1882/11 [FYBZ] 89142 89227 + Leu TAA [ENA] ¡û
>W1910503044 FYCA01000010 Bacteroidota Flavobacterium psychrophilum FI055 [FYCA] 89 174 + Leu TAA [ENA] ¡û
>W1910503095 FYCB01000061 Bacteroidota Flavobacterium psychrophilum DK150 [FYCB] 21833 21748 - Leu TAA [ENA] ¡û
>W1910503101 FYCC01000001 Bacteroidota Flavobacterium psychrophilum FI056 [FYCC] 63143 63058 - Leu TAA [ENA] ¡û
>W1910503141 FYCD01000014 Bacteroidota Flavobacterium psychrophilum DK001 [FYCD] 63144 63059 - Leu TAA [ENA] ¡û
>W1910503180 FYCE01000038 Bacteroidota Flavobacterium psychrophilum FI146 [FYCE] 89 174 + Leu TAA [ENA] ¡û
>W1910503196 FYCF01000006 Bacteroidota Flavobacterium psychrophilum DK002 [FYCF] 63143 63058 - Leu TAA [ENA] ¡û
>W1910503264 FYCG01000047 Bacteroidota Flavobacterium psychrophilum FI070 [FYCG] 82324 82239 - Leu TAA [ENA] ¡û
>W1910503267 FYCH01000003 Bacteroidota Flavobacterium psychrophilum CH1895 [FYCH] 68301 68386 + Leu TAA [ENA] ¡û
>W1910503325 FYCI01000045 Bacteroidota Flavobacterium psychrophilum DK095 [FYCI] 69362 69277 - Leu TAA [ENA] ¡û
>W1910503530 FYCM01000187 Bacteroidota Flavobacterium psychrophilum FPC 831 [FYCM] 13802 13887 + Leu TAA [ENA] ¡û
>W1910503541 FYCN01000064 Bacteroidota Flavobacterium psychrophilum JIP 08/99 [FYCN] 12879 12794 - Leu TAA [ENA] ¡û
>W1910503560 FYCO01000018 Bacteroidota Flavobacterium psychrophilum IT02 [FYCO] 88585 88670 + Leu TAA [ENA] ¡û
>W1910503591 FYCP01000001 Bacteroidota Flavobacterium psychrophilum KU 051128-10 [FYCP] 34700 34615 - Leu TAA [ENA] ¡û
>W1910503652 FYCR01000365 Bacteroidota Flavobacterium psychrophilum JIP 16/00 [FYCR] 1313 1228 - Leu TAA [ENA] ¡û
>W1910503654 FYCS01000001 Bacteroidota Flavobacterium psychrophilum IT09 [FYCS] 63143 63058 - Leu TAA [ENA] ¡û
>W1910503696 FYCT01000012 Bacteroidota Flavobacterium psychrophilum FI166 [FYCT] 68301 68386 + Leu TAA [ENA] ¡û
>W1910503733 FYCU01000102 Bacteroidota Flavobacterium psychrophilum KU 060626-4 [FYCU] 34146 34061 - Leu TAA [ENA] ¡û
>W1910503750 FYCV01000054 Bacteroidota Flavobacterium psychrophilum KU 060626-59 [FYCV] 7228 7313 + Leu TAA [ENA] ¡û
>W1910503802 FYCW01000043 Bacteroidota Flavobacterium psychrophilum LM-01-Fp [FYCW] 63143 63058 - Leu TAA [ENA] ¡û
>W1910503837 FYCX01000052 Bacteroidota Flavobacterium psychrophilum NO004 [FYCX] 90954 91039 + Leu TAA [ENA] ¡û
>W1910503864 FYCY01000031 Bacteroidota Flavobacterium psychrophilum NO014 [FYCY] 63143 63058 - Leu TAA [ENA] ¡û
>W1910503884 FYCZ01000007 Bacteroidota Flavobacterium psychrophilum LM-02-Fp [FYCZ] 68301 68386 + Leu TAA [ENA] ¡û
>W1910503946 FYDA01000069 Bacteroidota Flavobacterium psychrophilum NO042 [FYDA] 89037 89122 + Leu TAA [ENA] ¡û
>W1910503955 FYDB01000002 Bacteroidota Flavobacterium psychrophilum NO098 [FYDB] 71678 71593 - Leu TAA [ENA] ¡û
>W1910504024 FYDC01000041 Bacteroidota Flavobacterium psychrophilum NO083 [FYDC] 63143 63058 - Leu TAA [ENA] ¡û
>W1910504131 FYDF01000125 Bacteroidota Flavobacterium psychrophilum LVDJ XP189 [FYDF] 13794 13879 + Leu TAA [ENA] ¡û
>W1910505679 FYEO01000040 Bacteroidota Flavobacterium psychrophilum FPC 840 [FYEO] 1240 1155 - Leu TAA [ENA] ¡û
>W1910576495 JSCD01000008 Bacteroidota Flavobacterium psychrophilum 10 [JSCD] 94741 94826 + Leu TAA [ENA] ¡û
>W1910576633 JSWL01000007 Bacteroidota Flavobacterium psychrophilum IWL08 [JSWL] 73850 73935 + Leu TAA [ENA] ¡û
>W1910809496 MUHE01000014 Bacteroidota Flavobacterium psychrophilum DSM 3660 = ATCC 49418 [MUHE] 71864 71779 - Leu TAA [ENA] ¡û
>SRA1003309 SRR002326.381338 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 333 246 - Leu TAA [SRA]
>C151018529 CP007206 Bacteroidota Flavobacterium psychrophilum FPG101 [CP007206] 496151 496064 - Leu TAA [Ensembl] ¡û
>C151018577 CP007207 Bacteroidota Flavobacterium psychrophilum FPG3 [CP007207] 481617 481530 - Leu TAA [Ensembl] ¡û
>C151030366 CP007627 Bacteroidota Flavobacterium psychrophilum CSF259-93 [CP007627] 495899 495812 - Leu TAA [Ensembl] ¡û
>C151038990 CP008878 Bacteroidota Flavobacterium psychrophilum V3-5 [CP008878] 433594 433507 - Leu TAA [Ensembl] ¡û
>C151039028 CP008881 Bacteroidota Flavobacterium psychrophilum V4-24 [CP008881] 424716 424629 - Leu TAA [Ensembl] ¡û
>C151039065 CP008883 Bacteroidota Flavobacterium psychrophilum v4-33 [CP008883] 435257 435170 - Leu TAA [Ensembl] ¡û
>C151039555 CP008902 Bacteroidota Flavobacterium psychrophilum 950106-1/1 [CP008902] 421646 421559 - Leu TAA [Ensembl] ¡û
>C151065088 CP010274 Bacteroidota Flavobacterium psychrophilum 5 [CP010274] 479135 479048 - Leu TAA - ¡û
>C151065136 CP010276 Bacteroidota Flavobacterium psychrophilum PG2 [CP010276] 478929 478842 - Leu TAA - ¡û
>C151072388 CP010798 Bacteroidota Flavobacterium psychrophilum [CP010798] 1319088 1319175 + Leu TAA - ¡û
>W1511357153 JRWA01000006 Bacteroidota Flavobacterium psychrophilum CSF-259-93 [JRWA] 260471 260384 - Leu TAA [ENA] ¡û
>W1511357182 JRWB01000013 Bacteroidota Flavobacterium psychrophilum CN [JRWB] 190057 189970 - Leu TAA [ENA] ¡û
>W1511357231 JRWC01000003 Bacteroidota Flavobacterium psychrophilum CR [JRWC] 266812 266725 - Leu TAA [ENA] ¡û
>W1511357297 JRWD01000101 Bacteroidota Flavobacterium psychrophilum THC 02-90 [JRWD] 69150 69237 + Leu TAA [ENA] ¡û
>W1511357344 JRWE01000104 Bacteroidota Flavobacterium psychrophilum TN [JRWE] 69148 69235 + Leu TAA [ENA] ¡û
>W1511357391 JRWF01000097 Bacteroidota Flavobacterium psychrophilum TR [JRWF] 69161 69248 + Leu TAA [ENA] ¡û
>C161024455 CP010275 Bacteroidota Flavobacterium psychrophilum MH1 [CP010275] 479119 479032 - Leu TAA - ¡û
>C161024503 CP010277 Bacteroidota Flavobacterium psychrophilum VQ50 [CP010277] 479616 479529 - Leu TAA - ¡û
>C161024551 CP010278 Bacteroidota Flavobacterium psychrophilum 3 [CP010278] 479661 479574 - Leu TAA - ¡û
>W1610062194 BCNG01000020 Bacteroidota Flavobacterium psychrophilum [BCNG] 1298 1211 - Leu TAA [ENA] ¡û
>W1610764395 LNNF01000169 Bacteroidota Flavobacterium psychrophilum [LNNF] 95216 95303 + Leu TAA [ENA] ¡û
>W1610772907 LNTP01000157 Bacteroidota Flavobacterium psychrophilum [LNTP] 41606 41693 + Leu TAA [ENA] ¡û
>W1610772950 LNTQ01000128 Bacteroidota Flavobacterium psychrophilum [LNTQ] 7760 7673 - Leu TAA [ENA] ¡û
>W1610895186 LRTL01000005 Bacteroidota Flavobacterium psychrophilum [LRTL] 68975 69062 + Leu TAA [ENA] ¡û
>W1710059735 BCNG01000020 Bacteroidota Flavobacterium psychrophilum [BCNG] 1298 1211 - Leu TAA [ENA] ¡û
>W1710087876 BDSH01000050 Bacteroidota Flavobacterium psychrophilum [BDSH] 1297 1210 - Leu TAA [ENA] ¡û
>W1710507328 FMVE01000008 Bacteroidota Flavobacterium psychrophilum DSM 3660 [FMVE] 90283 90370 + Leu TAA [ENA] ¡û
>W1710555831 FOJT01000004 Bacteroidota Flavobacterium swingsii [FOJT] 354625 354712 + Leu TAA [ENA] ¡û
Identical group No.93360 (1 seq.)
>SRA1003340 SRR002326.401971 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 72 159 + Leu TAA [SRA]
Identical group No.93361 (1 seq.)
>SRA1003358 SRR002326.410170 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 126 213 + Leu TAA [SRA]
Identical group No.123065 (3 seq.)
>SRA1002914 SRR002326.99012 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 152 66 - Leu TAA [SRA]
>SRA1003536 SRR002327.6623 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 95 181 + Leu TAA [SRA]
>SRA1003946 SRR002328.56099 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 13 99 + Leu TAA [SRA]
Identical group No.123069 (2 seq.)
>SRA1002956 SRR002326.123889 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 74 160 + Leu TAA [SRA]
>SRA1004315 SRR002328.269228 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 167 253 + Leu TAA [SRA]
Identical group No.123078 (1 seq.)
>SRA1003434 SRR002326.463763 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 187 103 - Leu TAA [SRA]
Identical group No.129524 (1 seq.)
>SRA1003824 SRR002327.212654 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 161 75 - Leu TAA [SRA]
Identical group No.139297 (1 seq.)
>SRA1003930 SRR002328.44503 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 91 177 + Leu TAA [SRA]
Identical group No.139300 (1 seq.)
>SRA1004148 SRR002328.170888 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 26 112 + Leu TAA [SRA]
Identical group No.160420 (1 seq.)
>SRA1002808 SRR002326.31360 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 91 8 - Leu TAA [SRA]
Identical group No.160421 (1 seq.)
>SRA1002809 SRR002326.31392 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 235 150 - Leu TAA [SRA]
Identical group No.164410 (1 seq.)
>SRA1003605 SRR002327.65260 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 143 228 + Leu TAA [SRA]
Identical group No.190262 (1 seq.)
>SRA1003016 SRR002326.152871 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 186 270 + Leu TAA [SRA]
Identical group No.190275 (1 seq.)
>SRA1003488 SRR002326.498148 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 121 205 + Leu TAA [SRA]
Identical group No.196039 (3 seq.)
>W1710861577 LMDS01000005 Betaproteobacteria Rhizobacter sp. Root404 [LMDS] 1053089 1053173 + Leu TAA [ENA] ¡û
>SRA1003637 SRR002327.84025 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 90 174 + Leu TAA [SRA]
>W1610723923 LMDS01000005 Betaproteobacteria Rhizobacter sp. Root404 [LMDS] 1053089 1053173 + Leu TAA [ENA] ¡û
Identical group No.229628 (1 seq.)
>SRA1003250 SRR002326.339610 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 129 48 - Leu TAA [SRA]
Identical group No.233129 (1 seq.)
>SRA1003882 SRR002328.5489 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 149 68 - Leu TAA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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