tRNA genes clustered and arranged according to each identical group

Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)

Anticodon = CCA

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.483912 (2 seq.)
>ENV08000805 ABMJ01041734 freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) 105 30 - Trp CCA [ENA]
>SRA1000760 SRR001047.8169 Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139) 105 30 - Trp CCA [SRA]
Identical group No.483914 (3 seq.)
>ENV08000793 ABMJ01028693 freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) 9 84 + Trp CCA [ENA]
>SRA1000762 SRR001047.9839 Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139) 9 84 + Trp CCA [SRA]
>SRA1000781 SRR001047.41820 Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139) 9 84 + Trp CCA [SRA]
Identical group No.788316 (2 seq.)
>ENV08000810 ABMJ01047396 freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) 72 1 - Pseudo CCA [ENA]
>SRA1000829 SRR001047.192167 Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139) 72 1 - Trp CCA [SRA]
Identical group No.788317 (2 seq.)
>ENV08000828 ABMJ01082410 freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) 99 26 - Pseudo CCA [ENA]
>SRA1000857 SRR001047.298462 Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139) 99 26 - Trp CCA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK