Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA genes clustered and arranged according to each identical group

Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)

Anticodon = TGG

HIT: 5 Group(s).

Download Sequence	Representative sequence of each cluster
View ClustalW result

Sort by Identical group No.

Sort by the number of tRNAs in the Identical group

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.196016 (2 seq.)
	>ENV08000795	ABMJ01030283	freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)		113	37	-	Pro	TGG	[ENA]	○
	>SRA1000773	SRR001047.31791	Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)		113	37	-	Pro	TGG	[SRA]
Identical group No.302538 (2 seq.)
	>ENV08000856	ABMJ01238744	freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)		2	77	+	Pro	TGG	[ENA]	○
	>SRA1000770	SRR001047.21269	Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)		2	77	+	Pro	TGG	[SRA]
Identical group No.302541 (4 seq.)
	>ENV08000816	ABMJ01051490	freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)		81	6	-	Pro	TGG	[ENA]	○
	>ENV08000837	ABMJ01113011	freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)		6	81	+	Pro	TGG	[ENA]	○
	>SRA1000795	SRR001047.88955	Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)		6	81	+	Pro	TGG	[SRA]
	>SRA1000812	SRR001047.134779	Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)		81	6	-	Pro	TGG	[SRA]
Identical group No.302549 (2 seq.)
	>ENV08000792	ABMJ01026035	freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)		20	95	+	Pro	TGG	[ENA]	○
	>SRA1000845	SRR001047.255568	Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)		20	95	+	Pro	TGG	[SRA]
Identical group No.412600 (4 seq.)
	>ENV08000842	ABMJ01133234	freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)		103	29	-	Pro	TGG	[ENA]	○
	>ENV08000845	ABMJ01158926	freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)		7	81	+	Pro	TGG	[ENA]	○
	>SRA1000779	SRR001047.36690	Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)		103	29	-	Pro	TGG	[SRA]
	>SRA1000808	SRR001047.132432	Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)		7	81	+	Pro	TGG	[SRA]
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence	Representative sequence of each cluster
View ClustalW result

BACK