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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Viral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
Anticodon = TAC
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.452926 (5 seq.)
>SRA1005424
SRR013521.1097
Viral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
169
95
-
Val
TAC
[SRA]
>SRA1005427
SRR013521.1709
Viral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
169
95
-
Val
TAC
[SRA]
>SRA1005429
SRR013521.2173
Viral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
169
95
-
Val
TAC
[SRA]
>SRA1005431
SRR013521.3573
Viral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
169
95
-
Val
TAC
[SRA]
>SRA1005433
SRR013521.4214
Viral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
169
95
-
Val
TAC
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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