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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Viral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
Anticodon = TGT
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.452925 (5 seq.)
>SRA1005422
SRR013521.973
Viral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
113
188
+
Thr
TGT
[SRA]
>SRA1005425
SRR013521.1557
Viral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
113
188
+
Thr
TGT
[SRA]
>SRA1005435
SRR013521.6223
Viral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
113
188
+
Thr
TGT
[SRA]
>SRA1005436
SRR013521.6316
Viral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
113
188
+
Thr
TGT
[SRA]
>SRA1005437
SRR013521.8916
Viral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
113
188
+
Thr
TGT
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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