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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Wastewater EBPR microbial communities from Bioreactor (Australian sludge)
Anticodon = TGG
HIT:
6 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.275145 (240 seq.)
>W1710865322
LMGO01000007
Betaproteobacteria
Achromobacter sp. Root565 [LMGO]
54380
54304
-
Pro
TGG
[ENA]
¡û
>W1710866530
LMHN01000017
Betaproteobacteria
Achromobacter sp. Root170 [LMHN]
428108
428184
+
Pro
TGG
[ENA]
¡û
>W1710868051
LMIU01000003
Betaproteobacteria
Achromobacter sp. Root83 [LMIU]
108205
108281
+
Pro
TGG
[ENA]
¡û
>W1710870507
LMKO01000012
Betaproteobacteria
Xylophilus sp. Leaf220 [LMKO]
349923
349847
-
Pro
TGG
[ENA]
¡û
>W1710946663
LOSD01000006
Betaproteobacteria
Achromobacter xylosoxidans [LOSD]
3292676
3292600
-
Pro
TGG
[ENA]
¡û
>W1711052125
LRSP01000031
Betaproteobacteria
Bordetella pseudohinzii [LRSP]
46784
46860
+
Pro
TGG
[ENA]
¡û
>W1711052172
LRSQ01000029
Betaproteobacteria
Bordetella pseudohinzii [LRSQ]
46775
46851
+
Pro
TGG
[ENA]
¡û
>W1711077979
LSMI01000079
Betaproteobacteria
Achromobacter xylosoxidans [LSMI]
88499
88575
+
Pro
TGG
[ENA]
¡û
>W1711107665
LTSZ01000235
Betaproteobacteria
Achromobacter xylosoxidans HMSC057D05 [LTSZ]
35606
35530
-
Pro
TGG
[ENA]
¡û
>W1711115013
LTZT01000444
Betaproteobacteria
Achromobacter xylosoxidans HMSC15D03 [LTZT]
35606
35530
-
Pro
TGG
[ENA]
¡û
>W1711148472
LVKM01000086
Betaproteobacteria
Achromobacter ruhlandii [LVKM]
192050
192126
+
Pro
TGG
[ENA]
¡û
>W1711174016
LWDT01000057
Betaproteobacteria
Achromobacter insolitus AR476-2 [LWDT]
89197
89121
-
Pro
TGG
[ENA]
¡û
>W1711219908
LXPW01000028
Betaproteobacteria
Achromobacter xylosoxidans [LXPW]
40056
40132
+
Pro
TGG
[ENA]
¡û
>W1711219960
LXPX01000099
Betaproteobacteria
Achromobacter insolitus KCJK1731 [LXPX]
23551
23475
-
Pro
TGG
[ENA]
¡û
>W1711254489
LYQJ01000049
Betaproteobacteria
Achromobacter insolitus KCJK1724 [LYQJ]
42373
42449
+
Pro
TGG
[ENA]
¡û
>W1711466694
MJMO01000025
Betaproteobacteria
Achromobacter xylosoxidans [MJMO]
5045
4969
-
Pro
TGG
[ENA]
¡û
>W1711466705
MJMP01000001
Betaproteobacteria
Achromobacter xylosoxidans [MJMP]
922383
922459
+
Pro
TGG
[ENA]
¡û
>W1711658897
MQNQ01000477
Betaproteobacteria
Achromobacter sp. KAs 3-5 [MQNQ]
3486
3562
+
Pro
TGG
[ENA]
¡û
>W1711723110
MTLG01000094
Betaproteobacteria
Achromobacter xylosoxidans [MTLG]
88134
88210
+
Pro
TGG
[ENA]
¡û
>W1711723219
MTLI01000198
Betaproteobacteria
Achromobacter xylosoxidans [MTLI]
38706
38630
-
Pro
TGG
[ENA]
¡û
>W1711956572
NBTL01000001
Betaproteobacteria
Achromobacter xylosoxidans [NBTL]
2322256
2322332
+
Pro
TGG
[ENA]
¡û
>W1712110446
NJIF01000008
Betaproteobacteria
Achromobacter insolitus [NJIF]
92037
91961
-
Pro
TGG
[ENA]
¡û
>W1712110501
NJIG01000012
Betaproteobacteria
Achromobacter marplatensis [NJIG]
81858
81934
+
Pro
TGG
[ENA]
¡û
>C171047633
CP016341
Betaproteobacteria
Bordetella holmesii H903 [CP016341]
1603736
1603812
+
Pro
TGG
-
¡û
>C171091656
CP019236
Betaproteobacteria
Rhodoferax koreense DCY-110 [CP019236]
3420787
3420711
-
Pro
TGG
-
¡û
>C171091682
CP019239
Betaproteobacteria
Rhodoferax saidenbachensis DSM 22694 [CP019239]
1587963
1588039
+
Pro
TGG
-
¡û
>C171092280
CP019325
Betaproteobacteria
Achromobacter insolitus DSM 23807 [CP019325]
2976533
2976457
-
Pro
TGG
-
¡û
>C171114667
CP020917
Betaproteobacteria
Achromobacter denitrificans PR1 [CP020917]
3965039
3965115
+
Pro
TGG
-
¡û
>W131059178
ANGE01000096
Betaproteobacteria
Bordetella holmesii 44057 [ANGE]
15703
15779
+
Pro
TGG
[ENA]
¡û
>W131089812
AOEW01000001
Betaproteobacteria
Bordetella holmesii F627 [AOEW]
915176
915252
+
Pro
TGG
[ENA]
¡û
>W131090135
AOFR01000003
Betaproteobacteria
Bordetella holmesii H558 [AOFR]
469363
469439
+
Pro
TGG
[ENA]
¡û
>W131159970
AQWB01000032
Betaproteobacteria
Rhodocyclus sp. UW 659-1-F08 [AQWB]
2693
2617
-
Pro
TGG
[ENA]
¡û
>W131178416
ARLO01000065
Betaproteobacteria
Curvibacter lanceolatus ATCC 14669 [ARLO]
192760
192836
+
Pro
TGG
[ENA]
¡û
>WENV180272984
OBEQ012436380
[OBEQ] groundwater metagenome; groundwater
335
411
+
Pro
TGG
[ENA]
¢þ
>WENV180283876
OBID01005146
[OBID] metagenome; sludge
2979
2903
-
Pro
TGG
[ENA]
¢þ
>WENV181227744
OFDN01038753
[OFDN] hot springs metagenome; Water
1302
1226
-
Pro
TGG
[ENA]
¢þ
>WENV181372956
OFQX01014100
[OFQX] wastewater metagenome; WWTP Novara (Effluent)
136
60
-
Pro
TGG
[ENA]
¢þ
>WENV181376683
OFQZ01090725
[OFQZ] wastewater metagenome; Exp Tend NO 0WW
498
422
-
Pro
TGG
[ENA]
¢þ
>WENV181416656
OGCL01121564
[OGCL] hot springs metagenome; Hot spring water
395
319
-
Pro
TGG
[ENA]
¢þ
>W141142434
AWQR01000005
Betaproteobacteria
Rhodoferax saidenbachensis ED16 [AWQR]
64216
64140
-
Pro
TGG
[ENA]
¡û
>WENV181731556
OGQD01001404
[OGQD] human gut metagenome; faeces
3176
3252
+
Pro
TGG
[ENA]
¢þ
>W141187564
AYMF01000027
Betaproteobacteria
Achromobacter sp. DH1f DH1f [AYMF]
63121
63045
-
Pro
TGG
[ENA]
¡û
>W141202762
AZHL01000205
Betaproteobacteria
Achromobacter xylosoxidans X02736 [AZHL]
25664
25588
-
Pro
TGG
[ENA]
¡û
>W141276676
JADZ01000011
Betaproteobacteria
Curvibacter gracilis ATCC BAA-807 [JADZ]
215298
215374
+
Pro
TGG
[ENA]
¡û
>WENV183703593
PDVJ01026002
[PDVJ] alkali sediment metagenome; glacial lake sediment
406
330
-
Pro
TGG
[ENA]
¢þ
>WENV183727139
PJTO01006504
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
439
363
-
Pro
TGG
[ENA]
¢þ
>WENV183728078
PJTP01028686
[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
189
265
+
Pro
TGG
[ENA]
¢þ
>WENV183730068
PJTR01000492
[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment
2805
2729
-
Pro
TGG
[ENA]
¢þ
>WENV183730653
PJTS01000262
[PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment
25144
25068
-
Pro
TGG
[ENA]
¢þ
>WENV183732506
PJTX01001196
[PJTX] soil metagenome; Soil enriched (2) on filter paper: beechwood xylan treatment
2004
1928
-
Pro
TGG
[ENA]
¢þ
>WENV183733583
PJTY01005292
[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment
79
3
-
Pro
TGG
[ENA]
¢þ
>WENV183733785
PJTY01024934
[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment
467
391
-
Pro
TGG
[ENA]
¢þ
>WENV183734591
PJTZ01022106
[PJTZ] soil metagenome; Soil enriched (2) on filter paper
516
592
+
Pro
TGG
[ENA]
¢þ
>WENV183735605
PJUB01000160
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
22293
22217
-
Pro
TGG
[ENA]
¢þ
>WENV183736462
PJUC01004860
[PJUC] soil metagenome; Soil enriched on filter paper
1051
1127
+
Pro
TGG
[ENA]
¢þ
>WENV183738237
PJUD01132007
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
447
371
-
Pro
TGG
[ENA]
¢þ
>WENV183738656
PJUE01000063
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
96506
96582
+
Pro
TGG
[ENA]
¢þ
>WENV183742092
PJUH01000234
[PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment
21838
21914
+
Pro
TGG
[ENA]
¢þ
>WENV183742667
PJUI01000053
[PJUI] feces metagenome; Chicken feces (2) enriched on wood chips
61200
61124
-
Pro
TGG
[ENA]
¢þ
>WENV170010384
APMI01015437
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
3751
3827
+
Pro
TGG
[ENA]
¢þ
>WENV170011606
APMI01076774
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
1249
1325
+
Pro
TGG
[ENA]
¢þ
>W141383404
JDFP01000008
Betaproteobacteria
Bordetella holmesii 30539 [JDFP]
1126090
1126166
+
Pro
TGG
[ENA]
¡û
>W141400716
JDSC01000003
Betaproteobacteria
Bordetella holmesii 41130 [JDSC]
2181019
2181095
+
Pro
TGG
[ENA]
¡û
>W141400876
JDSJ01000003
Betaproteobacteria
Bordetella holmesii 70147 [JDSJ]
380638
380714
+
Pro
TGG
[ENA]
¡û
>W141400953
JDSK01000003
Betaproteobacteria
Bordetella holmesii 35009 [JDSK]
187739
187815
+
Pro
TGG
[ENA]
¡û
>W141401183
JDSS02000053
Betaproteobacteria
Candidatus Accumulibacter vicinus sp. SK-01 [JDSS]
137468
137544
+
Pro
TGG
[ENA]
¡û
>W141401200
JDST02000049
Betaproteobacteria
Candidatus Accumulibacter cognatus sp. SK-02 [JDST]
22684
22760
+
Pro
TGG
[ENA]
¡û
>W141401926
JDTF01000004
Betaproteobacteria
Bordetella holmesii 1058 [JDTF]
917062
917138
+
Pro
TGG
[ENA]
¡û
>W141402444
JDVG02000387
Betaproteobacteria
Candidatus Accumulibacter phosphatis sp. BA-91 [JDVG]
11215
11291
+
Pro
TGG
[ENA]
¡û
>W141426774
JEMX01000011
Betaproteobacteria
Candidatus Accumulibacter appositus sp. BA-92 [JEMX]
54252
54328
+
Pro
TGG
[ENA]
¡û
>W141426844
JEMY01000067
Betaproteobacteria
Candidatus Accumulibacter regalis sp. BA-93 [JEMY]
29394
29318
-
Pro
TGG
[ENA]
¡û
>WENV170554289
CXWK01059614
[CXWK] wastewater metagenome; activated sludge
1071
995
-
Pro
TGG
[ENA]
¢þ
>WENV170639301
JFJP01001804
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
36308
36232
-
Pro
TGG
[ENA]
¢þ
>WENV170639489
JFJP01003529
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
11384
11308
-
Pro
TGG
[ENA]
¢þ
>WENV170660933
JXWU01064005
[JXWU] soil metagenome; rice field; organic control Plot
241
165
-
Pro
TGG
[ENA]
¢þ
>WENV170689824
LFRM01313133
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
922
998
+
Pro
TGG
[ENA]
¢þ
>WENV170705522
LNAO01001638
[LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
928
1004
+
Pro
TGG
[ENA]
¢þ
>WENV170706498
LNAP01003610
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
19169
19245
+
Pro
TGG
[ENA]
¢þ
>WENV170706503
LNAP01003650
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
20902
20978
+
Pro
TGG
[ENA]
¢þ
>WENV170708331
LNAP01070744
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
132
56
-
Pro
TGG
[ENA]
¢þ
>W141451276
JFAW01000021
Betaproteobacteria
Candidatus Accumulibacter sp. SK-11 [JFAW]
30558
30634
+
Pro
TGG
[ENA]
¡û
>W141451294
JFAX01000003
Betaproteobacteria
Candidatus Accumulibacter adjunctus sp. SK-12 [JFAX]
41686
41610
-
Pro
TGG
[ENA]
¡û
>WENV170784458
MCND01000145
[MCND] bioreactor metagenome; activated sludge enriched with benzalkonium chloride
341
417
+
Pro
TGG
[ENA]
¢þ
>WENV170784547
MCNE01000381
[MCNE] bioreactor metagenome; sewage enriched with benzalkonium chloride
626
550
-
Pro
TGG
[ENA]
¢þ
>WENV170784650
MCNF01000482
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
821
745
-
Pro
TGG
[ENA]
¢þ
>WENV170784744
MCNG01000527
[MCNG] bioreactor metagenome; sea sediment enriched with benzalkonium chloride
1710
1786
+
Pro
TGG
[ENA]
¢þ
>WENV170965429
MTEU01002308
[MTEU] soil metagenome; naturally attenuated soil
1119
1195
+
Pro
TGG
[ENA]
¢þ
>WENV170966464
MTEX01010704
[MTEX] soil metagenome; soil biostimulated with molasses as carbon source
10970
10894
-
Pro
TGG
[ENA]
¢þ
>WENV170966703
MTEY01005059
[MTEY] soil metagenome; soil biostimulated with seedmeal as carbon source
78
2
-
Pro
TGG
[ENA]
¢þ
>WENV170966753
MTEY01007191
[MTEY] soil metagenome; soil biostimulated with seedmeal as carbon source
1783
1859
+
Pro
TGG
[ENA]
¢þ
>WENV170966754
MTEY01007191
[MTEY] soil metagenome; soil biostimulated with seedmeal as carbon source
1426
1350
-
Pro
TGG
[ENA]
¢þ
>W141486055
JFZY01000069
Betaproteobacteria
Bordetella holmesii CDC-H572-BH [JFZY]
16237
16313
+
Pro
TGG
[ENA]
¡û
>W141486118
JGAA01000004
Betaproteobacteria
Bordetella holmesii CDC-H635-BH [JGAA]
16170
16246
+
Pro
TGG
[ENA]
¡û
>C181033909
CP018890
Betaproteobacteria
Bordetella holmesii [CP018890]
1593720
1593796
+
Pro
TGG
-
¡û
>C181033963
CP018891
Betaproteobacteria
Bordetella holmesii [CP018891]
1605579
1605655
+
Pro
TGG
-
¡û
>C181034017
CP018892
Betaproteobacteria
Bordetella holmesii [CP018892]
1606630
1606706
+
Pro
TGG
-
¡û
>C181034071
CP018893
Betaproteobacteria
Bordetella holmesii [CP018893]
1604584
1604660
+
Pro
TGG
-
¡û
>C181034125
CP018894
Betaproteobacteria
Bordetella holmesii [CP018894]
1604546
1604622
+
Pro
TGG
-
¡û
>C181034209
CP018895
Betaproteobacteria
Bordetella holmesii [CP018895]
1662379
1662303
-
Pro
TGG
-
¡û
>C181034233
CP018896
Betaproteobacteria
Bordetella holmesii [CP018896]
1603729
1603805
+
Pro
TGG
-
¡û
>C181034402
CP018899
Betaproteobacteria
Bordetella holmesii [CP018899]
1599556
1599632
+
Pro
TGG
-
¡û
>C181045585
CP020647
Betaproteobacteria
Bordetella holmesii F028 [CP020647]
1603781
1603857
+
Pro
TGG
-
¡û
>C181045903
CP020653
Betaproteobacteria
Bordetella holmesii C690 [CP020653]
1604572
1604648
+
Pro
TGG
-
¡û
>C181078161
CP023270
Betaproteobacteria
Achromobacter spanius MYb73 [CP023270]
4680794
4680718
-
Pro
TGG
-
¡û
>C181111273
CP025030
Betaproteobacteria
Achromobacter spanius DSM 23806 [CP025030]
3064028
3064104
+
Pro
TGG
-
¡û
>C181144554
CP026973
Betaproteobacteria
Achromobacter insolitus FDAARGOS_88 [CP026973]
3341584
3341508
-
Pro
TGG
-
¡û
>C181169411
CP028901
Betaproteobacteria
Orrella marina HZ20 [CP028901]
3946567
3946643
+
Pro
TGG
-
¡û
>C181176214
CP029210
Betaproteobacteria
Aquabacterium olei NBRC 110486 [CP029210]
2624025
2623949
-
Pro
TGG
-
¡û
>C181210755
LS483395
Betaproteobacteria
Achromobacter xylosoxidans NCTC10808 [LS483395]
5209059
5208983
-
Pro
TGG
-
¡û
>C181227120
LT907988
Betaproteobacteria
Orrella dioscoreae [LT907988]
3421002
3420926
-
Pro
TGG
-
¡û
>C191017161
CP019933
Betaproteobacteria
Bordetella holmesii F274 [CP019933]
2000548
2000472
-
Pro
TGG
-
¡û
>C191035854
CP025521
Betaproteobacteria
Bordetella avium Owl19 [CP025521]
961743
961819
+
Pro
TGG
-
¡û
>W141520652
JGVZ01000078
Betaproteobacteria
Bordetella holmesii CDC-H629-BH [JGVZ]
2293
2217
-
Pro
TGG
[ENA]
¡û
>W141520722
JGWA01000120
Betaproteobacteria
Bordetella holmesii CDC-H719-BH [JGWA]
16135
16211
+
Pro
TGG
[ENA]
¡û
>W141520762
JGWB01000090
Betaproteobacteria
Bordetella holmesii CDC-H785-BH [JGWB]
16056
16132
+
Pro
TGG
[ENA]
¡û
>W141520829
JGWC01000197
Betaproteobacteria
Bordetella holmesii 04P3421 [JGWC]
3914
3838
-
Pro
TGG
[ENA]
¡û
>W141520857
JGWD01000116
Betaproteobacteria
Bordetella holmesii CDC-H643-BH [JGWD]
4154
4078
-
Pro
TGG
[ENA]
¡û
>W141521545
JGWR01000037
Betaproteobacteria
Bordetella bronchiseptica CA90 BB1334 [JGWR]
37996
38072
+
Pro
TGG
[ENA]
¡û
>W141523174
JGXY01000049
Betaproteobacteria
Bordetella bronchiseptica OSU095 [JGXY]
39679
39755
+
Pro
TGG
[ENA]
¡û
>C191081674
CP031842
Betaproteobacteria
Dechloromonas sp. HYN0024 [CP031842]
1763929
1763853
-
Pro
TGG
-
¡û
>C191084118
CP032084
Betaproteobacteria
Achromobacter sp. B7 [CP032084]
4628081
4628005
-
Pro
TGG
-
¡û
>W141531977
JHEP01000036
Betaproteobacteria
Bordetella pseudohinzii 8-296-03 [JHEP]
828474
828550
+
Pro
TGG
[ENA]
¡û
>W141532028
JHEP01000084
Betaproteobacteria
Bordetella pseudohinzii 8-296-03 [JHEP]
4353336
4353412
+
Pro
TGG
[ENA]
¡û
>C191205192
LR134302
Betaproteobacteria
Achromobacter spanius NCTC13519 [LR134302]
817511
817435
-
Pro
TGG
-
¡û
>C191208816
LR134361
Betaproteobacteria
Achromobacter insolitus NCTC13520 [LR134361]
1631729
1631805
+
Pro
TGG
-
¡û
>W141621672
JJNW01000097
Betaproteobacteria
Bordetella holmesii H620 [JJNW]
1688
1612
-
Pro
TGG
[ENA]
¡û
>W141697610
JMGZ01000004
Betaproteobacteria
Bordetella holmesii CDC-H809-BH [JMGZ]
16169
16245
+
Pro
TGG
[ENA]
¡û
>W141779052
JONM01000007
Betaproteobacteria
Andreprevotia chitinilytica DSM 18519 [JONM]
102759
102683
-
Pro
TGG
[ENA]
¡û
>W1910237038
FPJN01000057
Betaproteobacteria
Bordetella pseudohinzii [FPJN]
13560
13484
-
Pro
TGG
[ENA]
¡û
>C141011137
CP006958
Betaproteobacteria
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 [CP006958]
5289033
5288957
-
Pro
TGG
[Ensembl]
¡û
>W1910699702
MERU01000002
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_63_240 [MERU]
791106
791030
-
Pro
TGG
[ENA]
¡û
>W1910699946
MESA01000045
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_63_20 [MESA]
53386
53462
+
Pro
TGG
[ENA]
¡û
>W1910700345
MESK01000094
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_99 [MESK]
53460
53536
+
Pro
TGG
[ENA]
¡û
>W1910890717
NEVL01000004
Betaproteobacteria
Bordetella genomosp. 1 1 AU17610 [NEVL]
783542
783466
-
Pro
TGG
[ENA]
¡û
>W1910890831
NEVN01000009
Betaproteobacteria
Bordetella genomosp. 5 5 AU14646 [NEVN]
288369
288293
-
Pro
TGG
[ENA]
¡û
>W1910890925
NEVP01000011
Betaproteobacteria
Bordetella genomosp. 5 5 AU10456 [NEVP]
298476
298400
-
Pro
TGG
[ENA]
¡û
>W1910891206
NEVU01000003
Betaproteobacteria
Bordetella genomosp. 12 12 AU6712 [NEVU]
402259
402183
-
Pro
TGG
[ENA]
¡û
>W1911279039
NTGB01000001
Betaproteobacteria
Polynucleobacter rarus MT-CBb6A5 [NTGB]
730131
730207
+
Pro
TGG
[ENA]
¡û
>W1911566210
PCOQ01000028
Betaproteobacteria
Achromobacter sp. MYb9 [PCOQ]
40041
40117
+
Pro
TGG
[ENA]
¡û
>W1911636077
PVTV01000011
Betaproteobacteria
Jezberella montanilacus MWH-P2sevCIIIb [PVTV]
674751
674675
-
Pro
TGG
[ENA]
¡û
>W1911748815
QWFB01000033
Betaproteobacteria
Achromobacter sp. K91 [QWFB]
108168
108244
+
Pro
TGG
[ENA]
¡û
>W1810005510
BFBP01000014
Betaproteobacteria
Azospira sp. I13 [BFBP]
164800
164724
-
Pro
TGG
[ENA]
¡û
>SRA1002778
SRR002326.3245
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
41
117
+
Pro
TGG
[SRA]
>SRA1002814
SRR002326.33242
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
41
117
+
Pro
TGG
[SRA]
>W1810222096
POQS01000004
Betaproteobacteria
Achromobacter pulmonis ANB-1 [POQS]
40968
40892
-
Pro
TGG
[ENA]
¡û
>SRA1003967
SRR002328.63109
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
124
200
+
Pro
TGG
[SRA]
>W1810270672
PREU01000008
Betaproteobacteria
Achromobacter spanius 6 [PREU]
129021
128945
-
Pro
TGG
[ENA]
¡û
>W1810448789
PZMK01000414
Betaproteobacteria
Achromobacter xylosoxidans BHW-15 [PZMK]
3067
2991
-
Pro
TGG
[ENA]
¡û
>W1810487713
QAYS01000077
Betaproteobacteria
Achromobacter mucicolens KCJK8006 [QAYS]
43038
43114
+
Pro
TGG
[ENA]
¡û
>W1810672008
QJTC01000001
Betaproteobacteria
Xylophilus ampelinus CECT 7646 [QJTC]
319322
319398
+
Pro
TGG
[ENA]
¡û
>W1810695107
QLNH01000876
Actinomycetota
Streptomyces cavourensis YBQ59 [QLNH]
19291
19367
+
Pro
TGG
[ENA]
¡û
>W1810720816
QNRM01000008
Betaproteobacteria
Achromobacter marplatensis CECT 7342 [QNRM]
71551
71475
-
Pro
TGG
[ENA]
¡û
>W1810917565
QVXO01000021
Betaproteobacteria
Achromobacter xylosoxidans GD003A [QVXO]
62961
62885
-
Pro
TGG
[ENA]
¡û
>SRA1015723
SRR023846.172713
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
229
153
-
Pro
TGG
[SRA]
>SRA1015892
SRR023846.245306
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
161
237
+
Pro
TGG
[SRA]
>C151025392
CP007494
Betaproteobacteria
Bordetella holmesii ATCC 51541 [CP007494]
2926032
2926108
+
Pro
TGG
[Ensembl]
¡û
>C151025446
CP007495
Betaproteobacteria
Bordetella holmesii 44057 [CP007495]
2922394
2922470
+
Pro
TGG
[Ensembl]
¡û
>C151051252
CP009448
Betaproteobacteria
Achromobacter xylosoxidans [CP009448]
4769287
4769211
-
Pro
TGG
[Ensembl]
¡û
>W1510019105
BBVB01000038
Betaproteobacteria
Bordetella bronchiseptica KU1201 [BBVB]
32409
32333
-
Pro
TGG
[ENA]
¡û
>W10115885
ADMS01000115
Betaproteobacteria
Achromobacter piechaudii ATCC 43553 [ADMS]
12740
12664
-
Pro
TGG
[ENA]
¡û
>C10101136
CP001715
Betaproteobacteria
Candidatus Accumulibacter regalis [CP001715]
2667661
2667585
-
Pro
TGG
[Ensembl]
¡û
>C11101524
CP002287
Betaproteobacteria
Achromobacter xylosoxidans A8 [CP002287]
5331877
5331801
-
Pro
TGG
[Ensembl]
¡û
>W11103711
ACRC01000353
Betaproteobacteria
Achromobacter xylosoxidans C54 [ACRC]
44839
44763
-
Pro
TGG
[ENA]
¡û
>W11114434
ADDK02000003
Betaproteobacteria
Azospira oryzae PS [ADDK]
161827
161751
-
Pro
TGG
[ENA]
¡û
>W1511318715
JPYO01000029
Betaproteobacteria
Achromobacter sp. RTa [JPYO]
117335
117259
-
Pro
TGG
[ENA]
¡û
>W1511348509
JRKM01000001
Betaproteobacteria
Aquabacterium sp. NJ1 [JRKM]
4430166
4430242
+
Pro
TGG
[ENA]
¡û
>W11120382
ADMS01000115
Betaproteobacteria
Achromobacter piechaudii ATCC 43553 [ADMS]
12740
12664
-
Pro
TGG
[ENA]
¡û
>W1511448484
JUZW01000809
Betaproteobacteria
Achromobacter xylosoxidans 618_AXYL [JUZW]
1572
1648
+
Pro
TGG
[ENA]
¡û
>W1511448515
JUZX01000438
Betaproteobacteria
Achromobacter xylosoxidans 617_AXYL [JUZX]
18893
18969
+
Pro
TGG
[ENA]
¡û
>W1511591845
LBHW01000038
Betaproteobacteria
Achromobacter sp. LC458 [LBHW]
15041
14965
-
Pro
TGG
[ENA]
¡û
>W1511592943
LBIU01000181
Betaproteobacteria
Candidatus Accumulibacter adiacens phosphatis [LBIU]
5248
5324
+
Pro
TGG
[ENA]
¡û
>W1511592961
LBIV01000008
Betaproteobacteria
Candidatus Accumulibacter phosphatis [LBIV]
77
1
-
Pro
TGG
[ENA]
¡û
>W1511678865
LFDT01000014
Betaproteobacteria
Vogesella sp. EB [LFDT]
32353
32277
-
Pro
TGG
[ENA]
¡û
>W1511707506
LGVG01000035
Betaproteobacteria
Achromobacter spanius CGMCC9173 [LGVG]
47984
48060
+
Pro
TGG
[ENA]
¡û
>C121006960
CP003153
Betaproteobacteria
Azospira oryzae PS [CP003153]
2871381
2871305
-
Pro
TGG
[Ensembl]
¡û
>C161005231
CP007158
Betaproteobacteria
Bordetella holmesii H558 [CP007158]
2911056
2911132
+
Pro
TGG
-
¡û
>C161005285
CP007159
Betaproteobacteria
Bordetella holmesii F627 [CP007159]
2924391
2924467
+
Pro
TGG
-
¡û
>C161097285
CP016440
Betaproteobacteria
Bordetella pseudohinzii HI4681 [CP016440]
3050934
3050858
-
Pro
TGG
-
¡û
>C161106122
LN831029
Betaproteobacteria
Achromobacter xylosoxidans NCTC10807 [LN831029]
5286835
5286759
-
Pro
TGG
[Ensembl]
¡û
>W121019632
AGUF01000007
Betaproteobacteria
Achromobacter arsenitoxydans SY8 [AGUF]
60243
60167
-
Pro
TGG
[ENA]
¡û
>W121111185
ALJE01000005
Betaproteobacteria
Achromobacter marplatensis HLE [ALJE]
467943
468019
+
Pro
TGG
[ENA]
¡û
>W1610047254
BBDD01000046
Betaproteobacteria
Achromobacter sp. JCM 18799 [BBDD]
3248
3324
+
Pro
TGG
[ENA]
¡û
>W1610070621
BCTK01000006
Betaproteobacteria
Achromobacter piechaudii NBRC 102461 [BCTK]
1170315
1170391
+
Pro
TGG
[ENA]
¡û
>W1610077092
BCZG01000014
Betaproteobacteria
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 [BCZG]
27060
26984
-
Pro
TGG
[ENA]
¡û
>W1610093629
CYTC01000016
Betaproteobacteria
Achromobacter kerstersii ATCC31444 [CYTC]
66585
66509
-
Pro
TGG
[ENA]
¡û
>W1610093690
CYTE01000003
Betaproteobacteria
Achromobacter xylosoxidans 2789STDY5608612 [CYTE]
74160
74084
-
Pro
TGG
[ENA]
¡û
>W1610093758
CYTF01000015
Betaproteobacteria
Achromobacter xylosoxidans 2789STDY5608624 [CYTF]
100143
100067
-
Pro
TGG
[ENA]
¡û
>W1610093892
CYTI01000006
Betaproteobacteria
Achromobacter xylosoxidans 2789STDY5608606 [CYTI]
155897
155973
+
Pro
TGG
[ENA]
¡û
>W1610094003
CYTK01000002
Betaproteobacteria
Achromobacter aegrifaciens 2789STDY5608625 [CYTK]
10683
10607
-
Pro
TGG
[ENA]
¡û
>W1610094094
CYTM01000004
Betaproteobacteria
Achromobacter xylosoxidans 2789STDY5608620 [CYTM]
306811
306887
+
Pro
TGG
[ENA]
¡û
>W1610094150
CYTN01000003
Betaproteobacteria
Achromobacter xylosoxidans 2789STDY5608622 [CYTN]
577529
577605
+
Pro
TGG
[ENA]
¡û
>W1610094411
CYTS01000016
Betaproteobacteria
Achromobacter xylosoxidans 2789STDY5608619 [CYTS]
109955
109879
-
Pro
TGG
[ENA]
¡û
>W1610094423
CYTT01000001
Betaproteobacteria
Achromobacter sp. 2789STDY5608628 [CYTT]
827995
828071
+
Pro
TGG
[ENA]
¡û
>W1610094556
CYTV01000012
Betaproteobacteria
Bordetella pseudohinzii 2789STDY5608636 [CYTV]
46866
46942
+
Pro
TGG
[ENA]
¡û
>W1610094636
CYTX01000002
Betaproteobacteria
Achromobacter xylosoxidans 2789STDY5663443 [CYTX]
66925
66849
-
Pro
TGG
[ENA]
¡û
>W1610447571
FKBS01000002
Betaproteobacteria
Bordetella ansorpii [FKBS]
108125
108049
-
Pro
TGG
[ENA]
¡û
>C131007187
CP003803
Betaproteobacteria
Candidatus Kinetoplastibacterium desouzaii TCC079E [CP003803]
167626
167702
+
Pro
TGG
[Ensembl]
¡û
>C131007228
CP003804
Betaproteobacteria
Candidatus Kinetoplastibacterium crithidii TCC036E [CP003804]
166581
166657
+
Pro
TGG
[Ensembl]
¡û
>C131010809
CP003978
Betaproteobacteria
Candidatus Kinetoplastibacterium crithidii [ex Angomonas deanei [CP003978]
799415
799491
+
Pro
TGG
[Ensembl]
¡û
>C131019695
HE798385
Betaproteobacteria
Achromobacter xylosoxidans NH44784-1996 [HE798385]
3821437
3821513
+
Pro
TGG
-
¡û
>W1610506416
FLQX01000094
Betaproteobacteria
Candidatus Accumulibacter aalborgensis sp. S1 [FLQX]
121
197
+
Pro
TGG
[ENA]
¡û
>W1610506457
FLQY01000100
Betaproteobacteria
Candidatus Propionivibrio aalborgensis S1 [FLQY]
13330
13406
+
Pro
TGG
[ENA]
¡û
>W1610506799
FLRC01000030
Betaproteobacteria
Orrella dioscoreae LMG 29303 [FLRC]
18494
18570
+
Pro
TGG
[ENA]
¡û
>W1610604906
LFRI01000341
Betaproteobacteria
Aquabacterium parvum [LFRI]
24941
24865
-
Pro
TGG
[ENA]
¡û
>W1610727668
LMGO01000007
Betaproteobacteria
Achromobacter sp. Root565 [LMGO]
54380
54304
-
Pro
TGG
[ENA]
¡û
>W1610728876
LMHN01000017
Betaproteobacteria
Achromobacter sp. Root170 [LMHN]
428108
428184
+
Pro
TGG
[ENA]
¡û
>W1610730397
LMIU01000003
Betaproteobacteria
Achromobacter sp. Root83 [LMIU]
108205
108281
+
Pro
TGG
[ENA]
¡û
>W1610732853
LMKO01000012
Betaproteobacteria
Xylophilus sp. Leaf220 [LMKO]
349923
349847
-
Pro
TGG
[ENA]
¡û
>W1610802665
LOSD01000006
Betaproteobacteria
Achromobacter xylosoxidans [LOSD]
3292676
3292600
-
Pro
TGG
[ENA]
¡û
>W1610893313
LRSP01000031
Betaproteobacteria
Bordetella pseudohinzii [LRSP]
46784
46860
+
Pro
TGG
[ENA]
¡û
>W1610893360
LRSQ01000029
Betaproteobacteria
Bordetella pseudohinzii [LRSQ]
46775
46851
+
Pro
TGG
[ENA]
¡û
>W1610916995
LSMI01000079
Betaproteobacteria
Achromobacter xylosoxidans [LSMI]
88499
88575
+
Pro
TGG
[ENA]
¡û
>W1610959203
LVKM01000086
Betaproteobacteria
Achromobacter ruhlandii [LVKM]
192050
192126
+
Pro
TGG
[ENA]
¡û
>W1610982480
LWDT01000057
Betaproteobacteria
Achromobacter insolitus AR476-2 [LWDT]
89197
89121
-
Pro
TGG
[ENA]
¡û
>W1611004380
LXPW01000028
Betaproteobacteria
Achromobacter xylosoxidans [LXPW]
40056
40132
+
Pro
TGG
[ENA]
¡û
>W1611004432
LXPX01000099
Betaproteobacteria
Achromobacter insolitus KCJK1731 [LXPX]
23551
23475
-
Pro
TGG
[ENA]
¡û
>WENV079756
AATN01000260
Wastewater EBPR microbial communities from Bioreactor (Australian sludge)
3110
3032
-
Pro
TGG
[ENA]
>WENV079981
AATO01000124
Wastewater EBPR microbial communities from Bioreactor (USA sludge)
13445
13523
+
Pro
TGG
[ENA]
>WENV080034
AATO01001608
Wastewater EBPR microbial communities from Bioreactor (USA sludge)
118
196
+
Pro
TGG
[ENA]
>W1710043859
BBDD01000046
Betaproteobacteria
Achromobacter sp. JCM 18799 [BBDD]
3248
3324
+
Pro
TGG
[ENA]
¡û
>W1710067994
BCTK01000006
Betaproteobacteria
Achromobacter piechaudii NBRC 102461 [BCTK]
1170315
1170391
+
Pro
TGG
[ENA]
¡û
>W1710096733
CYTE01000003
Betaproteobacteria
Achromobacter xylosoxidans 2789STDY5608612 [CYTE]
74160
74084
-
Pro
TGG
[ENA]
¡û
>W1710096801
CYTF01000015
Betaproteobacteria
Achromobacter xylosoxidans 2789STDY5608624 [CYTF]
100143
100067
-
Pro
TGG
[ENA]
¡û
>W1710096935
CYTI01000006
Betaproteobacteria
Achromobacter xylosoxidans 2789STDY5608606 [CYTI]
155897
155973
+
Pro
TGG
[ENA]
¡û
>W1710097046
CYTK01000002
Betaproteobacteria
Achromobacter aegrifaciens 2789STDY5608625 [CYTK]
10683
10607
-
Pro
TGG
[ENA]
¡û
>W1710097137
CYTM01000004
Betaproteobacteria
Achromobacter xylosoxidans 2789STDY5608620 [CYTM]
306811
306887
+
Pro
TGG
[ENA]
¡û
>W1710097193
CYTN01000003
Betaproteobacteria
Achromobacter xylosoxidans 2789STDY5608622 [CYTN]
577529
577605
+
Pro
TGG
[ENA]
¡û
>W1710097412
CYTS01000016
Betaproteobacteria
Achromobacter xylosoxidans 2789STDY5608619 [CYTS]
109955
109879
-
Pro
TGG
[ENA]
¡û
>W1710097424
CYTT01000001
Betaproteobacteria
Achromobacter sp. 2789STDY5608628 [CYTT]
827995
828071
+
Pro
TGG
[ENA]
¡û
>W1710097557
CYTV01000012
Betaproteobacteria
Bordetella pseudohinzii 2789STDY5608636 [CYTV]
46866
46942
+
Pro
TGG
[ENA]
¡û
>W1710097596
CYTX01000002
Betaproteobacteria
Achromobacter xylosoxidans 2789STDY5663443 [CYTX]
66925
66849
-
Pro
TGG
[ENA]
¡û
>W1710447199
FKBS01000002
Betaproteobacteria
Bordetella ansorpii [FKBS]
108125
108049
-
Pro
TGG
[ENA]
¡û
>W1710498919
FLQX01000094
Betaproteobacteria
Candidatus Accumulibacter aalborgensis sp. S1 [FLQX]
121
197
+
Pro
TGG
[ENA]
¡û
>W1710498960
FLQY01000100
Betaproteobacteria
Candidatus Propionivibrio aalborgensis S1 [FLQY]
13330
13406
+
Pro
TGG
[ENA]
¡û
>W1710499020
FLRC01000030
Betaproteobacteria
Orrella dioscoreae LMG 29303 [FLRC]
18494
18570
+
Pro
TGG
[ENA]
¡û
>W1710516932
FNCY01000002
Betaproteobacteria
Propionivibrio dicarboxylicus [FNCY]
157444
157368
-
Pro
TGG
[ENA]
¡û
>W1710541636
FNYM01000005
Betaproteobacteria
Achromobacter sp. NFACC18-2 [FNYM]
173408
173484
+
Pro
TGG
[ENA]
¡û
>W1710605565
FWXD01000001
Betaproteobacteria
Andreprevotia lacus DSM 23236 [FWXD]
115922
115998
+
Pro
TGG
[ENA]
¡û
>W1710605891
FWXJ01000006
Betaproteobacteria
Polynucleobacter kasalickyi VK13 [FWXJ]
186713
186789
+
Pro
TGG
[ENA]
¡û
>W1710726349
LFRI01000341
Betaproteobacteria
Aquabacterium parvum [LFRI]
24941
24865
-
Pro
TGG
[ENA]
¡û
Identical group No.297245 (5 seq.)
>WENV170680657
LFEF01008011
[LFEF] freshwater metagenome; waterbloom
1678
1754
+
Pro
TGG
[ENA]
¢þ
>WENV170705674
LNAP01000111
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
33058
32982
-
Pro
TGG
[ENA]
¢þ
>C191159615
CP038440
Alphaproteobacteria
Brevundimonas sp. MF30-B [CP038440]
1555934
1556010
+
Pro
TGG
-
¡û
>W1911788051
QYBC01000024
Alphaproteobacteria
Lichenibacterium ramalinae RmlP001 [QYBC]
89837
89761
-
Pro
TGG
[ENA]
¡û
>WENV079929
AATN01009330
Wastewater EBPR microbial communities from Bioreactor (Australian sludge)
307
231
-
Pro
TGG
[ENA]
Identical group No.298428 (6 seq.)
>W1711377564
MDZA01000328
Bacteroidota
Hymenobacter coccineus CCM 8649 [MDZA]
30080
30006
-
Pro
TGG
[ENA]
¡û
>WENV180284951
OBID01172656
[OBID] metagenome; sludge
336
410
+
Pro
TGG
[ENA]
¢þ
>C181175079
CP029145
Bacteroidota
Hymenobacter nivis NBRC 111535 [CP029145]
577572
577646
+
Pro
TGG
-
¡û
>W1910651904
LYMU01000114
Bacteroidota
Hymenobacter sp. UV11 [LYMU]
143683
143609
-
Pro
TGG
[ENA]
¡û
>C161070717
CP014304
Bacteroidota
Hymenobacter sp. PAMC 26628 [CP014304]
1810879
1810953
+
Pro
TGG
[Ensembl]
¡û
>WENV079904
AATN01007539
Wastewater EBPR microbial communities from Bioreactor (Australian sludge)
159
237
+
Pro
TGG
[ENA]
Identical group No.303696 (4 seq.)
>W1711386579
MEFO01000019
Gammaproteobacteria
Xanthomonadaceae bacterium SCN 69-123 [MEFO]
409802
409878
+
Pro
TGG
[ENA]
¡û
>WENV170713000
LNFM01022159
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
1988
1912
-
Pro
TGG
[ENA]
¢þ
>WENV079794
AATN01000971
Wastewater EBPR microbial communities from Bioreactor (Australian sludge)
3206
3284
+
Pro
TGG
[ENA]
>W1710513555
FNAG01000001
Gammaproteobacteria
Aquimonas voraii [FNAG]
167600
167676
+
Pro
TGG
[ENA]
¡û
Identical group No.352160 (9 seq.)
>WENV180285854
OBID01763502
[OBID] metagenome; sludge
138
64
-
Pro
TGG
[ENA]
¢þ
>WENV170554168
CXWK01051114
[CXWK] wastewater metagenome; activated sludge
1674
1750
+
Pro
TGG
[ENA]
¢þ
>WENV170977820
MTKZ01032761
[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
25635
25559
-
Pro
TGG
[ENA]
¢þ
>WENV170985046
MWVW01013986
[MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil
918
844
-
Pro
TGG
[ENA]
¢þ
>WENV170986307
MWVX01029221
[MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil
536
462
-
Pro
TGG
[ENA]
¢þ
>WENV170986897
MWVX01094025
[MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil
695
619
-
Pro
TGG
[ENA]
¢þ
>WENV170992073
MWWB01000577
[MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil
5677
5751
+
Pro
TGG
[ENA]
¢þ
>WENV170992986
MWWB01147435
[MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil
541
467
-
Pro
TGG
[ENA]
¢þ
>WENV079878
AATN01005308
Wastewater EBPR microbial communities from Bioreactor (Australian sludge)
1092
1170
+
Pro
TGG
[ENA]
Identical group No.360510 (1 seq.)
>WENV079805
AATN01001057
Wastewater EBPR microbial communities from Bioreactor (Australian sludge)
3567
3491
-
Pro
TGG
[ENA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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