tRNA genes clustered and arranged according to each identical group

Wastewater EBPR microbial communities from Bioreactor (USA sludge)

Anticodon = CGT

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.465085 (9 seq.)
>W141401210 JDST02000073 Betaproteobacteria Candidatus Accumulibacter cognatus sp. SK-02 [JDST] 1472 1397 - Thr CGT [ENA] ¡û
>W141402438 JDVG02000049 Betaproteobacteria Candidatus Accumulibacter phosphatis sp. BA-91 [JDVG] 1188 1263 + Thr CGT [ENA] ¡û
>W141426843 JEMY01000067 Betaproteobacteria Candidatus Accumulibacter regalis sp. BA-93 [JEMY] 34421 34496 + Thr CGT [ENA] ¡û
>SRA1002123 SRR001308.257698 Metagenomic characterization of a wastewater treatment plant (SRP000180) 81 6 - Thr CGT [SRA]
>C10101131 CP001715 Betaproteobacteria Candidatus Accumulibacter regalis [CP001715] 3630171 3630096 - Thr CGT [Ensembl] ¡û
>W1511592983 LBIV01000185 Betaproteobacteria Candidatus Accumulibacter phosphatis [LBIV] 1373 1298 - Thr CGT [ENA] ¡û
>W1610506423 FLQX01000101 Betaproteobacteria Candidatus Accumulibacter aalborgensis sp. S1 [FLQX] 71049 71124 + Thr CGT [ENA] ¡û
>WENV079970 AATO01000047 Wastewater EBPR microbial communities from Bioreactor (USA sludge) 5364 5287 - Thr CGT [ENA]
>W1710498926 FLQX01000101 Betaproteobacteria Candidatus Accumulibacter aalborgensis sp. S1 [FLQX] 71049 71124 + Thr CGT [ENA] ¡û
Identical group No.487482 (35 seq.)
>W1711075414 LSKJ01000837 Alphaproteobacteria Rhodospirillaceae bacterium CCH5-H10 [LSKJ] 13524 13449 - Thr CGT [ENA] ¡û
>W1711384721 MEDI01000464 Alphaproteobacteria Kaistia sp. SCN 65-12 [MEDI] 713 788 + Thr CGT [ENA] ¡û
>WENV180020674 FTCZ01008202 [FTCZ] metagenome; soil 8023 7948 - Thr CGT [ENA] ¢þ
>WENV180253535 OBEQ010551523 [OBEQ] groundwater metagenome; groundwater 2448 2373 - Thr CGT [ENA] ¢þ
>WENV180267053 OBEQ011811814 [OBEQ] groundwater metagenome; groundwater 548 623 + Thr CGT [ENA] ¢þ
>WENV180371642 OBOI01006584 [OBOI] sediment metagenome; sediment 1610 1535 - Thr CGT [ENA] ¢þ
>WENV180690366 OCZS010004034 [OCZS] soil metagenome; soil 368 293 - Thr CGT [ENA] ¢þ
>WENV181165093 OEIR01581160 [OEIR] soil metagenome; soil 168 93 - Thr CGT [ENA] ¢þ
>WENV181223240 OFDC01003776 [OFDC] hot springs metagenome; Water 5798 5723 - Thr CGT [ENA] ¢þ
>WENV181227150 OFDN01002403 [OFDN] hot springs metagenome; Water 5840 5765 - Thr CGT [ENA] ¢þ
>W141244546 CAKO01000042 Alphaproteobacteria Reyranella massiliensis 521 [CAKO] 164058 164133 + Thr CGT [ENA] ¡û
>WENV183664650 ORJL010397047 [ORJL] groundwater metagenome; groundwater 1368 1442 + Thr CGT [ENA] ¢þ
>WENV183666613 ORJL010568034 [ORJL] groundwater metagenome; groundwater 359 284 - Thr CGT [ENA] ¢þ
>WENV183667352 ORJL010641094 [ORJL] groundwater metagenome; groundwater 24 99 + Thr CGT [ENA] ¢þ
>WENV183668235 ORJL010722138 [ORJL] groundwater metagenome; groundwater 536 461 - Thr CGT [ENA] ¢þ
>WENV183673781 ORJL011317726 [ORJL] groundwater metagenome; groundwater 35505 35430 - Thr CGT [ENA] ¢þ
>WENV183674693 ORJL011421276 [ORJL] groundwater metagenome; groundwater 13 88 + Thr CGT [ENA] ¢þ
>WENV183677197 ORJL011724730 [ORJL] groundwater metagenome; groundwater 2254 2329 + Thr CGT [ENA] ¢þ
>WENV170002422 AGTN01026238 [AGTN] bioreactor metagenome; poplar biomass 227 302 + Thr CGT [ENA] ¢þ
>WENV170003830 AGTN01465237 [AGTN] bioreactor metagenome; poplar biomass 106 31 - Thr CGT [ENA] ¢þ
>WENV170707281 LNAP01016661 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 3506 3431 - Thr CGT [ENA] ¢þ
>WENV170711720 LNFM01006752 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 10187 10112 - Thr CGT [ENA] ¢þ
>WENV170713130 LNFM01024507 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 5903 5828 - Thr CGT [ENA] ¢þ
>WENV170713864 LNFM01045074 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 1133 1208 + Thr CGT [ENA] ¢þ
>WENV170714203 LNFM01060339 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 2359 2284 - Thr CGT [ENA] ¢þ
>WENV170714415 LNFM01072442 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 1956 1881 - Thr CGT [ENA] ¢þ
>WENV170714915 LNFM01114971 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 18 93 + Thr CGT [ENA] ¢þ
>WENV170715015 LNFM01125213 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 76 1 - Thr CGT [ENA] ¢þ
>WENV170715057 LNFM01129365 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 19 94 + Thr CGT [ENA] ¢þ
>W1910698358 MEMN01000135 Alphaproteobacteria Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 [MEMN] 34164 34239 + Thr CGT [ENA] ¡û
>W1610914719 LSKJ01000837 Alphaproteobacteria Rhodospirillaceae bacterium CCH5-H10 [LSKJ] 13524 13449 - Thr CGT [ENA] ¡û
>WENV080097 AATO01004806 Wastewater EBPR microbial communities from Bioreactor (USA sludge) 939 1016 + Thr CGT [ENA]
>WENV080211 AATO01012994 Wastewater EBPR microbial communities from Bioreactor (USA sludge) 506 429 - Thr CGT [ENA]
>W1710548241 FODP01000020 Alphaproteobacteria Rhodospirillales bacterium URHD0017 [FODP] 14241 14166 - Thr CGT [ENA] ¡û
>W1710600374 FUWJ01000010 Alphaproteobacteria Enhydrobacter aerosaccus [FUWJ] 724 649 - Thr CGT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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