tRNA genes clustered and arranged according to each identical group

metagenomic water samples (SRP000427)

Anticodon = CAC

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.349125 (1 seq.)
>SRA1005111 SRR006907.36557 metagenomic water samples (SRP000427) 60 136 + Val CAC [SRA]
Identical group No.620450 (1 seq.)
>SRA1004947 SRR006906.193084 metagenomic water samples (SRP000427) 7 82 + Val CAC [SRA]
Identical group No.659693 (26 seq.)
>W1711129959 LUUM01000255 Alphaproteobacteria Methylosinus sp. R-45379 [LUUM] 82956 82882 - Val CAC [ENA] ¡û
>W1711228860 LXWX01000091 Alphaproteobacteria Methylosinus sp. 3S-1 [LXWX] 44567 44493 - Val CAC [ENA] ¡û
>C171101472 CP019948 Alphaproteobacteria Methylocystis bryophila S285 [CP019948] 2364652 2364726 + Val CAC - ¡û
>W131163842 ARAB01000008 Alphaproteobacteria Methylosinus sp. LW4 [ARAB] 1847245 1847171 - Val CAC [ENA] ¡û
>W131166816 ARCT01000001 Alphaproteobacteria Methylocystis rosea SV97 [ARCT] 173529 173455 - Val CAC [ENA] ¡û
>WENV180272316 OBEQ012367734 [OBEQ] groundwater metagenome; groundwater 320 394 + Val CAC [ENA] ¢þ
>W141188886 AYNA01000026 Alphaproteobacteria Methylocystis sp. SB2 [AYNA] 40406 40332 - Val CAC [ENA] ¡û
>W141216034 AZUO01000001 Alphaproteobacteria Methylosinus sp. LW3 [AZUO] 3441026 3440952 - Val CAC [ENA] ¡û
>WENV183665013 ORJL010432991 [ORJL] groundwater metagenome; groundwater 787 861 + Val CAC [ENA] ¢þ
>WENV183674829 ORJL011435875 [ORJL] groundwater metagenome; groundwater 134 208 + Val CAC [ENA] ¢þ
>C181089630 CP023737 Alphaproteobacteria Methylosinus trichosporium OB3b [CP023737] 3026979 3027053 + Val CAC - ¡û
>C191118905 CP034086 Alphaproteobacteria Methylocystis rosea GW6 [CP034086] 2554340 2554266 - Val CAC - ¡û
>W141701406 JMKQ01000006 Alphaproteobacteria Methylocystis sp. LW5 [JMKQ] 1901315 1901241 - Val CAC [ENA] ¡û
>W141821228 JQNK01000009 Alphaproteobacteria Methylosinus sp. PW1 [JQNK] 1381431 1381357 - Val CAC [ENA] ¡û
>W1911494338 OBKE01003717 Unclassified bacterium [OBKE] 742 668 - Val CAC [ENA] ¡û
>W1911747246 QWDD01000001 Alphaproteobacteria Methylocystis hirsuta CSC1 [QWDD] 3202056 3201982 - Val CAC [ENA] ¡û
>W1911747247 QWDD01000001 Alphaproteobacteria Methylocystis hirsuta CSC1 [QWDD] 3200208 3200134 - Val CAC [ENA] ¡û
>W1810330585 PUIV01000054 Alphaproteobacteria Methylosinus sporium DSM 17706 [PUIV] 3055 3129 + Val CAC [ENA] ¡û
>SRA1005120 SRR006907.43956 metagenomic water samples (SRP000427) 165 91 - Val CAC [SRA]
>W1810397196 PYDU01000005 Alphaproteobacteria Methylocystis sp. MitZ-2018 [PYDU] 121649 121575 - Val CAC [ENA] ¡û
>W10118832 ADVE01000024 Alphaproteobacteria Methylosinus trichosporium OB3b [ADVE] 14385 14311 - Val CAC [ENA] ¡û
>W11125004 ADVE01000024 Alphaproteobacteria Methylosinus trichosporium OB3b [ADVE] 14385 14311 - Val CAC [ENA] ¡û
>W11150249 AEVM01000022 Alphaproteobacteria Methylocystis sp. ATCC 49242 [AEVM] 49846 49920 + Val CAC [ENA] ¡û
>C131019936 HE956757 Alphaproteobacteria Methylocystis sp. SC2 [HE956757] 1274295 1274221 - Val CAC [Ensembl] ¡û
>W1610941032 LUUM01000255 Alphaproteobacteria Methylosinus sp. R-45379 [LUUM] 82956 82882 - Val CAC [ENA] ¡û
>W1611012777 LXWX01000091 Alphaproteobacteria Methylosinus sp. 3S-1 [LXWX] 44567 44493 - Val CAC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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