tRNA genes clustered and arranged according to each identical group

metagenomic water samples (SRP000427)

Anticodon = TCG

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.285996 (20 seq.)
>W141023466 AJXL01000039 Bacteroidota Flavobacterium sp. ACAM 123 [AJXL] 270 196 - Arg TCG [ENA] ¡û
>WENV180593953 OCOY01005929 [OCOY] marine metagenome; ENVO:00002010 719 793 + Arg TCG [ENA] ¢þ
>WENV181324168 OFLC01002303 [OFLC] marine metagenome; melt pond 1020 946 - Arg TCG [ENA] ¢þ
>WENV170559509 CXWL01126392 [CXWL] groundwater metagenome; biofilm material 3316 3240 - Arg TCG [ENA] ¢þ
>W141820208 JQMS01000001 Bacteroidota Flavobacterium sp. 83 [JQMS] 1735081 1735155 + Arg TCG [ENA] ¡û
>W1810072167 PEFE01000001 Bacteroidota Flavobacterium sp. 11 [PEFE] 1602853 1602927 + Arg TCG [ENA] ¡û
>W1810156550 PJBJ01000030 Bacteroidota Flavobacterium sp. ALD4 [PJBJ] 283228 283154 - Arg TCG [ENA] ¡û
>SRA1004359 SRR006906.9820 metagenomic water samples (SRP000427) 85 159 + Arg TCG [SRA]
>SRA1004948 SRR006906.194189 metagenomic water samples (SRP000427) 90 16 - Arg TCG [SRA]
>W1810365435 PVUB01000003 Bacteroidota Flavobacterium granuli DSM 17797 [PVUB] 234124 234198 + Arg TCG [ENA] ¡û
>W1810722597 QNUX01000006 Bacteroidota Flavobacterium psychrolimnae LMG 22018 [QNUX] 99610 99684 + Arg TCG [ENA] ¡û
>W1810723010 QNVY01000001 Bacteroidota Flavobacterium petrolei Kopri-42 [QNVY] 1151469 1151543 + Arg TCG [ENA] ¡û
>W1810763366 QQBA01000007 Bacteroidota Flavobacterium glaciei DSM 19728 [QQBA] 29853 29779 - Arg TCG [ENA] ¡û
>W1511390913 JSYM01000001 Bacteroidota Flavobacterium sp. AED [JSYM] 1718318 1718394 + Arg TCG [ENA] ¡û
>W121034200 AHKF01000016 Bacteroidota Flavobacterium frigoris PS1 [AHKF] 54791 54867 + Arg TCG [ENA] ¡û
>W1710528035 FNMV01000009 Bacteroidota Flavobacterium degerlachei [FNMV] 53375 53299 - Arg TCG [ENA] ¡û
>W1710539670 FNVP01000002 Bacteroidota Flavobacterium urumqiense [FNVP] 37806 37730 - Arg TCG [ENA] ¡û
>W1710548142 FODN01000001 Bacteroidota Flavobacterium sinopsychrotolerans [FODN] 337867 337791 - Arg TCG [ENA] ¡û
>W1710585721 FQWO01000004 Bacteroidota Flavobacterium granuli [FQWO] 234126 234200 + Arg TCG [ENA] ¡û
>W1710592406 FRCL01000001 Bacteroidota Flavobacterium xinjiangense [FRCL] 227169 227095 - Arg TCG [ENA] ¡û
Identical group No.343897 (9 seq.)
>WENV181395773 OFSB01002262 [OFSB] freshwater metagenome; Freshwater Lake 1425 1349 - Arg TCG [ENA] ¢þ
>WENV181845645 OGVX01005714 [OGVX] freshwater metagenome; freshwater 123 47 - Arg TCG [ENA] ¢þ
>WENV181847791 OGVZ01000096 [OGVZ] freshwater metagenome; freshwater 11043 11117 + Arg TCG [ENA] ¢þ
>WENV181853772 OGWJ01000299 [OGWJ] freshwater metagenome; freshwater 1905 1831 - Arg TCG [ENA] ¢þ
>WENV181854318 OGWK01000178 [OGWK] freshwater metagenome; freshwater 4557 4631 + Arg TCG [ENA] ¢þ
>WENV182865801 OKRQ01002641 [OKRQ] freshwater metagenome; freshwater 583 657 + Arg TCG [ENA] ¢þ
>WENV170626440 FUWD013222567 [FUWD] metagenome; unknown 41 117 + Arg TCG [ENA] ¢þ
>SRA1005186 SRR006907.90374 metagenomic water samples (SRP000427) 94 170 + Arg TCG [SRA]
>SRA1005234 SRR006907.127447 metagenomic water samples (SRP000427) 94 170 + Arg TCG [SRA]
Identical group No.349128 (1 seq.)
>SRA1005124 SRR006907.46280 metagenomic water samples (SRP000427) 168 244 + Arg TCG [SRA]
Identical group No.349157 (1 seq.)
>SRA1005380 SRR006907.225904 metagenomic water samples (SRP000427) 103 176 + Arg TCG [SRA]
Identical group No.349161 (1 seq.)
>SRA1005406 SRR006907.253326 metagenomic water samples (SRP000427) 168 244 + Arg TCG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK