tRNA genes clustered and arranged according to each identical group

microbial fraction from oxidized sediments of the Soudan Mine (Minnesota)

Anticodon = GCC

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.482640 (13 seq.)
>W1710943642 LOPX01000014 Gammaproteobacteria Guyparkeria sp. XI15 XI15 [LOPX] 331412 331487 + Gly GCC [ENA] ¡û
>W1710943653 LOPX01000016 Gammaproteobacteria Guyparkeria sp. XI15 XI15 [LOPX] 13632 13557 - Gly GCC [ENA] ¡û
>W1711029598 LRFH01000014 Gammaproteobacteria Guyparkeria sp. WRN-7 WRN-7 [LRFH] 331412 331487 + Gly GCC [ENA] ¡û
>W1711029609 LRFH01000016 Gammaproteobacteria Guyparkeria sp. WRN-7 WRN-7 [LRFH] 13632 13557 - Gly GCC [ENA] ¡û
>WENV181412422 OGCK01000205 [OGCK] hot springs metagenome; hot spring sediment 8551 8626 + Gly GCC [ENA] ¢þ
>WENV183515338 OMKS01057708 [OMKS] sediment metagenome; hot spring sediment 15 90 + Gly GCC [ENA] ¢þ
>ENV08000042 ABLU01073959 microbial fraction from oxidized sediments of the Soudan Mine (Minnesota) 32 107 + Gly GCC [ENA] ¡û
>W1911817771 QZMT01000004 Gammaproteobacteria Guyparkeria sp. SCN-R1 [QZMT] 75920 75845 - Gly GCC [ENA] ¡û
>W1911817792 QZMT01000016 Gammaproteobacteria Guyparkeria sp. SCN-R1 [QZMT] 9912 9837 - Gly GCC [ENA] ¡û
>W1610799942 LOPX01000014 Gammaproteobacteria Guyparkeria sp. XI15 XI15 [LOPX] 331412 331487 + Gly GCC [ENA] ¡û
>W1610799953 LOPX01000016 Gammaproteobacteria Guyparkeria sp. XI15 XI15 [LOPX] 13632 13557 - Gly GCC [ENA] ¡û
>W1610877866 LRFH01000014 Gammaproteobacteria Guyparkeria sp. WRN-7 WRN-7 [LRFH] 331412 331487 + Gly GCC [ENA] ¡û
>W1610877877 LRFH01000016 Gammaproteobacteria Guyparkeria sp. WRN-7 WRN-7 [LRFH] 13632 13557 - Gly GCC [ENA] ¡û
Identical group No.529287 (1 seq.)
>ENV08000062 ABLU01111694 microbial fraction from oxidized sediments of the Soudan Mine (Minnesota) 104 28 - Gly GCC [ENA] ¡û
Identical group No.656715 (24 seq.)
>W131224490 AUCV01000028 Thermodesulfobacteriota Desulfogranum japonicum DSM 18378 [AUCV] 15402 15476 + Gly GCC [ENA] ¡û
>W131224539 AUCW01000022 Thermodesulfobacteriota Desulfogranum mediterraneum DSM 13871 [AUCW] 15937 16011 + Gly GCC [ENA] ¡û
>W131224540 AUCW01000023 Thermodesulfobacteriota Desulfogranum mediterraneum DSM 13871 [AUCW] 48170 48096 - Gly GCC [ENA] ¡û
>W1711317447 MAXH01000032 Thermodesulfobacteriota Desulfobulbaceae bacterium S3730MH12 [MAXH] 261 335 + Gly GCC [ENA] ¡û
>W1711317575 MAXK01000251 Thermodesulfobacteriota Desulfobulbaceae bacterium S5133MH15 [MAXK] 2978 3052 + Gly GCC [ENA] ¡û
>W1711317714 MAXQ01000006 Thermodesulfobacteriota Desulfobulbaceae bacterium C00003063 [MAXQ] 2518 2592 + Gly GCC [ENA] ¡û
>WENV180287512 OBIK01096169 [OBIK] hydrothermal vent metagenome; sea water 82 156 + Gly GCC [ENA] ¢þ
>ENV08000007 ABLU01018147 microbial fraction from oxidized sediments of the Soudan Mine (Minnesota) 128 54 - Gly GCC [ENA] ¡û
>ENV08000009 ABLU01020117 microbial fraction from oxidized sediments of the Soudan Mine (Minnesota) 127 53 - Gly GCC [ENA] ¡û
>WENV183705519 PDWI01001716 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 6560 6486 - Gly GCC [ENA] ¢þ
>WENV183711736 PDWI01078583 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 79 5 - Gly GCC [ENA] ¢þ
>WENV183716123 PDWI01288476 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 287 361 + Gly GCC [ENA] ¢þ
>WENV183716583 PDWJ01000057 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 74217 74291 + Gly GCC [ENA] ¢þ
>WENV183717631 PDWJ01001252 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 31799 31725 - Gly GCC [ENA] ¢þ
>WENV183718923 PDWJ01007711 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 1793 1719 - Gly GCC [ENA] ¢þ
>WENV183720054 PDWJ01025461 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 78 152 + Gly GCC [ENA] ¢þ
>WENV170571314 FLOH01000129 [FLOH] marine metagenome; water 201323 201397 + Gly GCC [ENA] ¢þ
>WENV170647101 JQIA01010727 [JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead 2946 2872 - Gly GCC [ENA] ¢þ
>WENV170696299 LGVF01010243 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 2518 2592 + Gly GCC [ENA] ¢þ
>WENV170697571 LGVF01156387 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 630 556 - Gly GCC [ENA] ¢þ
>WENV170698364 LGVF01320986 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 2123 2049 - Gly GCC [ENA] ¢þ
>WENV170698550 LGVF01359894 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 329 403 + Gly GCC [ENA] ¢þ
>C131010890 CP003985 Thermodesulfobacteriota Desulfocapsa sulfexigens DSM 10523 [CP003985] 3964792 3964866 + Gly GCC [Ensembl] ¡û
>W1710525206 FNJI01000041 Thermodesulfobacteriota Desulforhopalus singaporensis [FNJI] 18896 18822 - Gly GCC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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