tRNA genes clustered and arranged according to each identical group

microbial fraction from oxidized sediments of the Soudan Mine (Minnesota)

Anticodon = TTG

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.656062 (88 seq.)
>W1710791442 LJNT01000158 Alphaproteobacteria Rhodobacteraceae bacterium HLUCCA09 [LJNT] 5269 5195 - Gln TTG [ENA] ¡û
>W1710797142 LJSU01000015 Alphaproteobacteria Rhodobacteraceae bacterium HLUCCO07 [LJSU] 73591 73665 + Gln TTG [ENA] ¡û
>W1711175836 LWFA01000773 Alphaproteobacteria Roseovarius sp. HI0049 [LWFA] 497 571 + Gln TTG [ENA] ¡û
>W1711175864 LWFA01002777 Alphaproteobacteria Roseovarius sp. HI0049 [LWFA] 1307 1233 - Gln TTG [ENA] ¡û
>W1711229678 LXYQ01000134 Alphaproteobacteria Roseovarius indicus [LXYQ] 23298 23224 - Gln TTG [ENA] ¡û
>W1711258974 LYUZ01000096 Alphaproteobacteria Leisingera sp. JC1 [LYUZ] 6943 6869 - Gln TTG [ENA] ¡û
>W1711361434 MDLF01000018 Alphaproteobacteria Rhodobacteraceae bacterium (ex Bugula neritina AB1) [MDLF] 118949 119023 + Gln TTG [ENA] ¡û
>W131155854 AQOX01000003 Alphaproteobacteria Limimaricola hongkongensis DSM 17492 [AQOX] 19855 19781 - Gln TTG [ENA] ¡û
>w012520 AAMO01000002 Alphaproteobacteria Pseudooceanicola batsensis HTCC2597 [AAMO] 50866 50942 + Gln TTG [ENA] ¡û
>WENV180103407 OAPA01031280 [OAPA] marine metagenome; ENVO:00002010 72 146 + Gln TTG [ENA] ¢þ
>WENV180394385 OBPS01003109 [OBPS] marine metagenome; ENVO:00002010 seawater 189 115 - Gln TTG [ENA] ¢þ
>WENV180395388 OBPT01014675 [OBPT] marine metagenome; ENVO:00002010 seawater 1030 1104 + Gln TTG [ENA] ¢þ
>W141063319 APGJ01000004 Alphaproteobacteria Limimaricola hongkongensis DSM 17492 [APGJ] 20720 20646 - Gln TTG [ENA] ¡û
>WENV181233791 OFET01000107 [OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis 114289 114363 + Gln TTG [ENA] ¢þ
>WENV181234469 OFEU01000187 [OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium 64678 64752 + Gln TTG [ENA] ¢þ
>WENV181234681 OFEU01001383 [OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium 5962 6036 + Gln TTG [ENA] ¢þ
>W141151559 AXBD01000002 Alphaproteobacteria Leisingera daeponensis DSM 23529 [AXBD] 13720 13646 - Gln TTG [ENA] ¡û
>W141151818 AXBI01000017 Alphaproteobacteria Leisingera caerulea DSM 24564 [AXBI] 2188439 2188365 - Gln TTG [ENA] ¡û
>WENV019182 AACY020527037 Marine microbial communities from Global Ocean Sampling (GOS) 2188 2112 - Gln TTG [ENA]
>ENV08000034 ABLU01055718 microbial fraction from oxidized sediments of the Soudan Mine (Minnesota) 40 114 + Gln TTG [ENA] ¡û
>WENV183749810 PPFU01215726 [PPFU] hypolithon metagenome; Antarctic Hypolithon 220 294 + Gln TTG [ENA] ¢þ
>WENV170468393 CEVF01029848 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 450 524 + Gln TTG [ENA] ¢þ
>WENV170655181 JTFN01010533 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 27 101 + Gln TTG [ENA] ¢þ
>WENV170655437 JTFN01031984 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 649 723 + Gln TTG [ENA] ¢þ
>WENV170655495 JTFN01038399 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 762 688 - Gln TTG [ENA] ¢þ
>WENV170655561 JTFN01046029 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 28 102 + Gln TTG [ENA] ¢þ
>WENV170682555 LFIK01000314 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 35016 35090 + Gln TTG [ENA] ¢þ
>WENV170682857 LFIK01001866 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 13822 13748 - Gln TTG [ENA] ¢þ
>WENV170901227 MDTD01166967 [MDTD] marine metagenome; seawater 5625 5551 - Gln TTG [ENA] ¢þ
>WENV170939316 MDTG01324032 [MDTG] marine metagenome; seawater 2320 2394 + Gln TTG [ENA] ¢þ
>WENV170958707 MKWU01001750 [MKWU] sponge metagenome; 22603 22677 + Gln TTG [ENA] ¢þ
>WENV170962824 MRWF01027957 [MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 99733 99659 - Gln TTG [ENA] ¢þ
>WENV170963230 MRWG01000051 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 115790 115864 + Gln TTG [ENA] ¢þ
>WENV170963946 MRWG01001490 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 9928 9854 - Gln TTG [ENA] ¢þ
>C181158388 CP027665 Alphaproteobacteria Pukyongiella litopenaei SH-1 [CP027665] 3210893 3210819 - Gln TTG - ¡û
>W09111686 ABXF01000011 Alphaproteobacteria Rhodobacterales bacterium Y4I [ABXF] 13880 13806 - Gln TTG [ENA] ¡û
>W141818732 JQLS01000008 Alphaproteobacteria Roseovarius sp. MCTG156(2b) [JQLS] 3997500 3997426 - Gln TTG [ENA] ¡û
>W1910443127 FWFU01000003 Alphaproteobacteria Roseovarius halotolerans CECT 8110 [FWFU] 640635 640709 + Gln TTG [ENA] ¡û
>W1910443292 FWFY01000003 Alphaproteobacteria Limimaricola soesokkakensis CECT 8367 [FWFY] 36937 36863 - Gln TTG [ENA] ¡û
>W1910548992 FZOY01000002 Alphaproteobacteria Tropicimonas sediminicola DSM 29339 [FZOY] 428220 428294 + Gln TTG [ENA] ¡û
>W1911189717 NQWH01000017 Alphaproteobacteria Limimaricola cinnabarinus XM1 [NQWH] 1574 1500 - Gln TTG [ENA] ¡û
>W1911638556 PVWS01000060 Alphaproteobacteria Roseovarius sp. A46 [PVWS] 4941 5015 + Gln TTG [ENA] ¡û
>W1911696495 QMEJ01000001 Alphaproteobacteria Tropicimonas sp. IMCC34011 [QMEJ] 1057727 1057801 + Gln TTG [ENA] ¡û
>W1911696578 QMEK01000009 Alphaproteobacteria Tropicimonas sp. IMCC34043 [QMEK] 56355 56281 - Gln TTG [ENA] ¡û
>W1911747135 QWDA01000001 Alphaproteobacteria Paracoccaceae bacterium IMCC 34051 [QWDA] 311348 311274 - Gln TTG [ENA] ¡û
>W1911813279 QZEX01000001 Alphaproteobacteria Chachezhania antarctica SM1703 [QZEX] 716815 716741 - Gln TTG [ENA] ¡û
>W1810061257 PDNI01000030 Alphaproteobacteria Roseovarius nitratireducens TFZ [PDNI] 8933 9007 + Gln TTG [ENA] ¡û
>W1810101673 PGTB01000199 Alphaproteobacteria Pseudooceanicola lipolyticus 157 [PGTB] 5590 5516 - Gln TTG [ENA] ¡û
>W1810356746 PVND01000004 Alphaproteobacteria Meinhardsimonia xiamenensis DSM 24422 [PVND] 138314 138388 + Gln TTG [ENA] ¡û
>W1810400377 PYGB01000002 Alphaproteobacteria Limimaricola soesokkakensis DSM 29956 [PYGB] 36905 36831 - Gln TTG [ENA] ¡û
>W1810584041 QEYE01000026 Alphaproteobacteria Maritimibacter sp. 55A14 [QEYE] 42867 42941 + Gln TTG [ENA] ¡û
>W1810692303 QLIW01000008 Alphaproteobacteria Rhodobacteraceae bacterium AsT-22 [QLIW] 1353 1279 - Gln TTG [ENA] ¡û
>W1810707326 QNGB01000011 Alphaproteobacteria Roseovarius sp. TE539 [QNGB] 124542 124616 + Gln TTG [ENA] ¡û
>W1810721888 QNTQ01000001 Alphaproteobacteria Rhodosalinus halophilus E84 [QNTQ] 160360 160286 - Gln TTG [ENA] ¡û
>W1810722634 QNVJ01000029 Alphaproteobacteria Alkalilacustris brevis 34079 [QNVJ] 50001 50075 + Gln TTG [ENA] ¡û
>W1810761152 QPLK01000011 Alphaproteobacteria Rhodovulum sp. 12E13 [QPLK] 2343 2269 - Gln TTG [ENA] ¡û
>WENV042324 AACY022229785 Marine microbial communities from Global Ocean Sampling (GOS) 225 151 - Gln TTG [ENA]
>W1511482567 JWLC01000011 Alphaproteobacteria Leisingera sp. ANG-M1 [JWLC] 142931 143005 + Gln TTG [ENA] ¡û
>W1511482631 JWLD01000051 Alphaproteobacteria Leisingera sp. ANG-Vp [JWLD] 938 864 - Gln TTG [ENA] ¡û
>W1511482740 JWLF01000018 Alphaproteobacteria Leisingera sp. ANG-S3 [JWLF] 129442 129516 + Gln TTG [ENA] ¡û
>W1511482748 JWLG01000002 Alphaproteobacteria Leisingera sp. ANG-M6 [JWLG] 127134 127060 - Gln TTG [ENA] ¡û
>W1511482803 JWLH01000002 Alphaproteobacteria Leisingera sp. ANG-S5 [JWLH] 170984 170910 - Gln TTG [ENA] ¡û
>W1511482875 JWLI01000007 Alphaproteobacteria Leisingera sp. ANG-M7 [JWLI] 107151 107225 + Gln TTG [ENA] ¡û
>W1511483035 JWLM01000004 Alphaproteobacteria Leisingera sp. ANG-S [JWLM] 69918 69992 + Gln TTG [ENA] ¡û
>W11157644 AFCF01000066 Alphaproteobacteria Leisingera sp. ANG1 ANG1 [AFCF] 129483 129557 + Gln TTG [ENA] ¡û
>W1610093059 CYSR01000027 Alphaproteobacteria Leisingera aquaemixtae [CYSR] 16476 16402 - Gln TTG [ENA] ¡û
>W1610578280 LAXI01000002 Alphaproteobacteria Roseovarius indicus [LAXI] 222972 223046 + Gln TTG [ENA] ¡û
>W1610655367 LJNT01000158 Alphaproteobacteria Rhodobacteraceae bacterium HLUCCA09 [LJNT] 5269 5195 - Gln TTG [ENA] ¡û
>W1610661099 LJSU01000015 Alphaproteobacteria Rhodobacteraceae bacterium HLUCCO07 [LJSU] 73591 73665 + Gln TTG [ENA] ¡û
>W1610984149 LWFA01000773 Alphaproteobacteria Roseovarius sp. HI0049 [LWFA] 497 571 + Gln TTG [ENA] ¡û
>W1610984177 LWFA01002777 Alphaproteobacteria Roseovarius sp. HI0049 [LWFA] 1307 1233 - Gln TTG [ENA] ¡û
>W1611013548 LXYQ01000134 Alphaproteobacteria Roseovarius indicus [LXYQ] 23298 23224 - Gln TTG [ENA] ¡û
>W1611021239 LYUZ01000096 Alphaproteobacteria Leisingera sp. JC1 [LYUZ] 6943 6869 - Gln TTG [ENA] ¡û
>W1710015579 AQQU01000004 Alphaproteobacteria Oceanicola sp. 22II-s10i [AQQU] 146341 146267 - Gln TTG [ENA] ¡û
>W1710083054 BDIY01000009 Alphaproteobacteria Roseovarius sp. A-2 [BDIY] 7833 7907 + Gln TTG [ENA] ¡û
>W1710096267 CYSR01000027 Alphaproteobacteria Leisingera aquaemixtae [CYSR] 16476 16402 - Gln TTG [ENA] ¡û
>W1710514203 FNAT01000004 Alphaproteobacteria Limimaricola pyoseonensis [FNAT] 243223 243149 - Gln TTG [ENA] ¡û
>W1710520704 FNFV01000004 Alphaproteobacteria Meinhardsimonia xiamenensis xiamenense [FNFV] 242967 242893 - Gln TTG [ENA] ¡û
>W1710539215 FNVD01000012 Alphaproteobacteria Jhaorihella thermophila [FNVD] 85991 86065 + Gln TTG [ENA] ¡û
>W1710541187 FNYD01000001 Alphaproteobacteria Cribrihabitans marinus [FNYD] 487644 487718 + Gln TTG [ENA] ¡û
>W1710545549 FOBO01000029 Alphaproteobacteria Roseovarius tolerans [FOBO] 8028 8102 + Gln TTG [ENA] ¡û
>W1710552359 FOGU01000004 Alphaproteobacteria Tranquillimonas rosea roseus [FOGU] 390056 390130 + Gln TTG [ENA] ¡û
>W1710557705 FOLG01000001 Alphaproteobacteria Tropicimonas isoalkanivorans [FOLG] 426787 426861 + Gln TTG [ENA] ¡û
>W1710559857 FOMY01000003 Alphaproteobacteria Roseovarius indicus [FOMY] 356891 356817 - Gln TTG [ENA] ¡û
>W1710572887 FOXA01000002 Alphaproteobacteria Tranquillimonas alkanivorans [FOXA] 243333 243259 - Gln TTG [ENA] ¡û
>W1710594769 FSRL01000001 Alphaproteobacteria Vannielia litorea litoreus [FSRL] 2781063 2781137 + Gln TTG [ENA] ¡û
>W1710609101 FXBQ01000001 Alphaproteobacteria Maritimibacter sp. HL-12 [FXBQ] 1023038 1022964 - Gln TTG [ENA] ¡û
>W1710697153 LAXI01000002 Alphaproteobacteria Roseovarius indicus [LAXI] 222972 223046 + Gln TTG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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