tRNA genes clustered and arranged according to each identical group

stramenopiles

Anticodon = CAT

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.88724 (7 seq.)
>WENV180212315 OBAN01006119 [OBAN] marine metagenome; ENVO 00002150 283 367 + Ile2 CAT [ENA] ¢þ
>WENV180370125 OBOH01033070 [OBOH] marine metagenome; ENVO:00002010 393 309 - Ile2 CAT [ENA] ¢þ
>WENV180594057 OCOY01021981 [OCOY] marine metagenome; ENVO:00002010 259 175 - Ile2 CAT [ENA] ¢þ
>CHL1810002573 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 62624 62708 + Met CAT [ENA] ¡û
>CHL1810002661 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 32505 32591 + Met CAT [ENA] ¡û
>CHL1810008344 KC509522 Stramenopiles Cylindrotheca closterium ccmp1855 (KC509522) 30564 30478 - Met CAT [ENA] ¡û
>CHL090102726 EF067920 stramenopiles Phaeodactylum tricornutum 30471 30557 + Met CAT [ENA] ¡û
Identical group No.93672 (17 seq.)
>WENV180364969 OBOB01000890 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 689 775 + Ile2 CAT [ENA] ¢þ
>WENV180593571 OCOX01080717 [OCOX] marine metagenome; ENVO:00002010 282 366 + Ile2 CAT [ENA] ¢þ
>WENV170506777 CEVW01356043 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 481 567 + Met CAT [ENA] ¢þ
>WENV170539137 CEWR01152891 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9155 9239 + Met CAT [ENA] ¢þ
>WENV170639264 JFJP01001719 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 699 785 + Met CAT [ENA] ¢þ
>WENV170639269 JFJP01001724 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 2455 2541 + Met CAT [ENA] ¢þ
>WENV170810584 MDSW01151423 [MDSW] marine metagenome; seawater 8171 8257 + Met CAT [ENA] ¢þ
>WENV170918550 MDTF01001423 [MDTF] marine metagenome; seawater 6156 6072 - Met CAT [ENA] ¢þ
>CHL1810008299 KC509521 Stramenopiles Coscinodiscus radiatus ccmp310 (KC509521) 24269 24353 + Met CAT [ENA] ¡û
>CHL1810008427 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 23685 23599 - Met CAT [ENA] ¡û
>CHL1810013752 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 5933 5846 - Met CAT [ENA] ¡û
>CHL1810059322 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 24634 24549 - Met CAT [ENA] ¡û
>CHL1810059360 MG755798 Stramenopiles Attheya longicornis (MG755798) 45761 45847 + Met CAT [ENA] ¡û
>CHL1810059382 MG755799 Stramenopiles Actinocyclus subtilis (MG755799) 24212 24297 + Met CAT [ENA] ¡û
>CHL1810059513 MG755803 Stramenopiles Psammoneis obaidii (MG755803) 44133 44047 - Met CAT [ENA] ¡û
>CHL090102774 EF067921 stramenopiles Thalassiosira pseudonana 6075 5991 - Met CAT [ENA] ¡û
>CHL090103365 Z67753 stramenopiles Odontella sinensis 96215 96301 + Met CAT [ENA] ¡û
Identical group No.279135 (65 seq.)
>WENV180109002 OAPI01067820 [OAPI] marine metagenome; ENVO.00002150 83 8 - fMet CAT [ENA] ¢þ
>WENV180113551 OAPR01000070 [OAPR] marine metagenome; seawater 3784 3709 - fMet CAT [ENA] ¢þ
>WENV180209269 OBAK01054581 [OBAK] marine metagenome; ENVO.00002150 309 384 + fMet CAT [ENA] ¢þ
>WENV180357484 OBNN01017252 [OBNN] marine metagenome; Coastal water 543 468 - fMet CAT [ENA] ¢þ
>WENV180363116 OBNY01000580 [OBNY] marine metagenome; ENVO:00002010 1723 1648 - fMet CAT [ENA] ¢þ
>WENV180366933 OBOE01000286 [OBOE] marine metagenome; ENVO:00002010 1595 1668 + fMet CAT [ENA] ¢þ
>WENV180368766 OBOG01000183 [OBOG] marine metagenome; seawater 3336 3261 - fMet CAT [ENA] ¢þ
>WENV180369846 OBOH01005549 [OBOH] marine metagenome; ENVO:00002010 774 699 - fMet CAT [ENA] ¢þ
>WENV180374673 OBOK01005804 [OBOK] marine metagenome; seawater 466 541 + fMet CAT [ENA] ¢þ
>WENV180376348 OBOM01002569 [OBOM] marine metagenome; Seawater 1390 1315 - fMet CAT [ENA] ¢þ
>WENV180394416 OBPS01004486 [OBPS] marine metagenome; ENVO:00002010 seawater 2040 1967 - fMet CAT [ENA] ¢þ
>WENV180398974 OBQE01004540 [OBQE] marine metagenome; ENVO.00002150 261 334 + fMet CAT [ENA] ¢þ
>WENV180587478 OCOO01005560 [OCOO] marine metagenome; seawater 233 308 + fMet CAT [ENA] ¢þ
>WENV180591121 OCOV01000311 [OCOV] marine metagenome; ENVO:01000301 1273 1198 - fMet CAT [ENA] ¢þ
>WENV180650283 OCSY01003246 [OCSY] marine metagenome; 30 L Plastic container 509 434 - fMet CAT [ENA] ¢þ
>WENV181162583 OEIO01001508 [OEIO] marine metagenome; sea ice 360 287 - fMet CAT [ENA] ¢þ
>WENV181320988 OFKJ01006708 [OFKJ] marine metagenome; sea ice 304 231 - fMet CAT [ENA] ¢þ
>WENV181325736 OFLJ01019131 [OFLJ] seawater metagenome; seawater 402 329 - fMet CAT [ENA] ¢þ
>WENV181329517 OFLX01010119 [OFLX] seawater metagenome; seawater 502 429 - fMet CAT [ENA] ¢þ
>WENV181367121 OFPU01000198 [OFPU] freshwater metagenome; Freshwater Lake 1524 1451 - fMet CAT [ENA] ¢þ
>WENV181391447 OFRT01007774 [OFRT] seawater metagenome; seawater 931 856 - fMet CAT [ENA] ¢þ
>WENV182565763 OJEH01042325 [OJEH] seawater metagenome; Sea water 311 384 + fMet CAT [ENA] ¢þ
>WENV182566649 OJEL01015918 [OJEL] seawater metagenome; Sea water 74 147 + fMet CAT [ENA] ¢þ
>WENV183618953 OOFP01007802 [OOFP] marine metagenome; seawater 931 856 - fMet CAT [ENA] ¢þ
>WENV183619583 OOFQ01019446 [OOFQ] marine metagenome; seawater 402 329 - fMet CAT [ENA] ¢þ
>WENV183619893 OOFR01000131 [OOFR] marine metagenome; seawater 6644 6571 - fMet CAT [ENA] ¢þ
>WENV183620568 OOFS01002285 [OOFS] marine metagenome; sea ice 1635 1560 - fMet CAT [ENA] ¢þ
>WENV183620963 OOFT01000670 [OOFT] marine metagenome; sea ice 1162 1237 + fMet CAT [ENA] ¢þ
>WENV183621922 OOFV01000791 [OOFV] marine metagenome; seawater 3431 3356 - fMet CAT [ENA] ¢þ
>WENV183625148 OOGF01001566 [OOGF] marine metagenome; seawater 439 512 + fMet CAT [ENA] ¢þ
>WENV183628223 OOGN01000067 [OOGN] marine metagenome; sea ice 3882 3809 - fMet CAT [ENA] ¢þ
>WENV170306395 CESJ01029376 [CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1299 1226 - Met CAT [ENA] ¢þ
>WENV170325198 CEST01002712 [CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 19389 19462 + Met CAT [ENA] ¢þ
>WENV170533812 CEWO01166431 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 361 286 - Met CAT [ENA] ¢þ
>WENV170537706 CEWR01023464 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 12088 12161 + Met CAT [ENA] ¢þ
>WENV170566725 FLLY01000490 [FLLY] seawater metagenome; seawater 1745 1818 + Met CAT [ENA] ¢þ
>WENV170568215 FLMP01022620 [FLMP] seawater metagenome; seawater 1502 1429 - Met CAT [ENA] ¢þ
>WENV170601004 FUWD010152471 [FUWD] metagenome; unknown 194 119 - Met CAT [ENA] ¢þ
>WENV170602380 FUWD010232373 [FUWD] metagenome; unknown 17 92 + Met CAT [ENA] ¢þ
>WENV170639221 JFJP01001701 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 9690 9615 - Met CAT [ENA] ¢þ
>WENV170639257 JFJP01001712 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 7062 6989 - Met CAT [ENA] ¢þ
>WENV170828735 MDSY01155352 [MDSY] marine metagenome; seawater 20330 20403 + Met CAT [ENA] ¢þ
>WENV170832361 MDSZ01060836 [MDSZ] marine metagenome; seawater 122 49 - Met CAT [ENA] ¢þ
>WENV170919358 MDTF01008253 [MDTF] marine metagenome; seawater 10583 10510 - Met CAT [ENA] ¢þ
>WENV170920047 MDTF01014525 [MDTF] marine metagenome; seawater 1335 1262 - Met CAT [ENA] ¢þ
>CHL1810000384 AP011960 Stramenopiles Fistulifera solaris JPCC DA0580 (AP011960) 16653 16728 + Met CAT [ENA] ¡û
>CHL1810002595 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 35694 35619 - Met CAT [ENA] ¡û
>CHL1810008267 KC509520 Stramenopiles Asterionellopsis glacialis ccmp1717 (KC509520) 31688 31763 + Met CAT [ENA] ¡û
>CHL1810008296 KC509521 Stramenopiles Coscinodiscus radiatus ccmp310 (KC509521) 16945 17018 + Met CAT [ENA] ¡û
>CHL1810008375 KC509524 Stramenopiles Leptocylindrus danicus ccmp1856 (KC509524) 13278 13353 + Met CAT [ENA] ¡û
>CHL1810008404 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 20963 21036 + Met CAT [ENA] ¡û
>CHL1810013637 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 3267 3192 - Met CAT [ENA] ¡û
>CHL1810013679 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 55058 55133 + Met CAT [ENA] ¡û
>CHL1810013734 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 55199 55274 + Met CAT [ENA] ¡û
>CHL1810059262 MG755792 Stramenopiles Plagiogramma staurophorum (MG755792) 44820 44747 - Met CAT [ENA] ¡û
>CHL1810059294 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 13683 13610 - Met CAT [ENA] ¡û
>CHL1810059330 MG755796 Stramenopiles Guinardia striata (MG755796) 48180 48253 + Met CAT [ENA] ¡û
>CHL1810059350 MG755798 Stramenopiles Attheya longicornis (MG755798) 10494 10567 + Met CAT [ENA] ¡û
>CHL1810059379 MG755799 Stramenopiles Actinocyclus subtilis (MG755799) 16978 17051 + Met CAT [ENA] ¡û
>CHL1810059510 MG755803 Stramenopiles Psammoneis obaidii (MG755803) 51514 51439 - Met CAT [ENA] ¡û
>CHL1810059526 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 55378 55451 + Met CAT [ENA] ¡û
>CHL1810059545 MG755805 Stramenopiles Biddulphia biddulphiana (MG755805) 5425 5500 + Met CAT [ENA] ¡û
>CHL1810059572 MG755806 Stramenopiles Biddulphia tridens (MG755806) 5574 5649 + Met CAT [ENA] ¡û
>CHL1810059651 MG755808 Stramenopiles Acanthoceras zachariasii (MG755808) 1963 1890 - Met CAT [ENA] ¡û
>CHL090102756 EF067921 stramenopiles Thalassiosira pseudonana 55849 55924 + Met CAT [ENA] ¡û
Identical group No.288600 (60 seq.)
>WENV180038603 LLBY010000546 [LLBY] soil metagenome; soil from tomato rhizosphere 41875 41800 - fMet CAT [ENA] ¢þ
>WENV180103689 OAPB01000224 [OAPB] marine metagenome; Sterile flask 1971 1896 - fMet CAT [ENA] ¢þ
>WENV180114885 OAPS01062749 [OAPS] marine metagenome; sea water 142 69 - fMet CAT [ENA] ¢þ
>WENV180294507 OBIY01200284 [OBIY] beach sand metagenome; beach sand 167 92 - fMet CAT [ENA] ¢þ
>WENV180310115 OBJS01231205 [OBJS] beach sand metagenome; beach sand 102 177 + fMet CAT [ENA] ¢þ
>WENV180365423 OBOB01130896 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 265 338 + fMet CAT [ENA] ¢þ
>WENV180388849 OBPI01000461 [OBPI] marine metagenome; Sterile flask 2606 2681 + fMet CAT [ENA] ¢þ
>WENV180589539 OCOS01000008 [OCOS] marine metagenome; Sterile flask 5082 5007 - fMet CAT [ENA] ¢þ
>WENV181304801 OFIC01004629 [OFIC] marine metagenome; sea ice 454 527 + fMet CAT [ENA] ¢þ
>WENV181304926 OFIE01000371 [OFIE] marine metagenome; sea ice 402 477 + fMet CAT [ENA] ¢þ
>WENV181316049 OFJS01000176 [OFJS] marine metagenome; sea ice 1955 1880 - fMet CAT [ENA] ¢þ
>WENV181321603 OFKM01021318 [OFKM] marine metagenome; sea ice 516 441 - fMet CAT [ENA] ¢þ
>WENV181322016 OFKP01000364 [OFKP] marine metagenome; sea ice 735 810 + fMet CAT [ENA] ¢þ
>WENV181322403 OFKR01002552 [OFKR] marine metagenome; sea ice 476 549 + fMet CAT [ENA] ¢þ
>WENV181322635 OFKT01007692 [OFKT] marine metagenome; sea ice 326 401 + fMet CAT [ENA] ¢þ
>WENV181322713 OFKU01000415 [OFKU] marine metagenome; sea ice 670 743 + fMet CAT [ENA] ¢þ
>WENV181322831 OFKV01000320 [OFKV] marine metagenome; sea ice 1954 2027 + fMet CAT [ENA] ¢þ
>WENV181323705 OFKZ01000198 [OFKZ] marine metagenome; sea ice 1775 1850 + fMet CAT [ENA] ¢þ
>WENV181324233 OFLD01000237 [OFLD] marine metagenome; sea ice 1158 1231 + fMet CAT [ENA] ¢þ
>WENV181324841 OFLH01016092 [OFLH] marine metagenome; sea ice 80 155 + fMet CAT [ENA] ¢þ
>WENV181415503 OGCL01012625 [OGCL] hot springs metagenome; Hot spring water 2564 2489 - fMet CAT [ENA] ¢þ
>WENV183615054 OOEA01043474 [OOEA] marine metagenome; sea ice 67 142 + fMet CAT [ENA] ¢þ
>WENV183615281 OOEB01000955 [OOEB] marine metagenome; sea ice 1064 989 - fMet CAT [ENA] ¢þ
>WENV183615922 OOEC01005498 [OOEC] marine metagenome; sea ice 510 583 + fMet CAT [ENA] ¢þ
>WENV183616740 OOEE01000119 [OOEE] marine metagenome; sea ice 9470 9397 - fMet CAT [ENA] ¢þ
>WENV183617483 OOEG01001227 [OOEG] marine metagenome; sea ice 2732 2659 - fMet CAT [ENA] ¢þ
>WENV183621443 OOFU01000905 [OOFU] marine metagenome; sea ice 2919 2992 + fMet CAT [ENA] ¢þ
>WENV183622596 OOFW01000003 [OOFW] marine metagenome; sea ice 2987 2914 - fMet CAT [ENA] ¢þ
>WENV183622973 OOFX01000163 [OOFX] marine metagenome; sea ice 1796 1723 - fMet CAT [ENA] ¢þ
>WENV183624358 OOGD01002514 [OOGD] marine metagenome; sea ice 1990 1917 - fMet CAT [ENA] ¢þ
>WENV183624549 OOGD01037623 [OOGD] marine metagenome; sea ice 575 648 + fMet CAT [ENA] ¢þ
>WENV183624688 OOGE01000895 [OOGE] marine metagenome; sea ice 550 477 - fMet CAT [ENA] ¢þ
>WENV183625583 OOGG01001621 [OOGG] marine metagenome; sea ice 144 219 + fMet CAT [ENA] ¢þ
>WENV183627422 OOGL01003590 [OOGL] marine metagenome; sea ice 2118 2043 - fMet CAT [ENA] ¢þ
>WENV183627974 OOGM01000148 [OOGM] marine metagenome; sea ice 1780 1853 + fMet CAT [ENA] ¢þ
>WENV183628590 OOGO01002524 [OOGO] marine metagenome; sea ice 1868 1941 + fMet CAT [ENA] ¢þ
>WENV170025008 BCQL01180649 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 211 286 + Met CAT [ENA] ¢þ
>WENV170274433 CERM01017452 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1128 1055 - Met CAT [ENA] ¢þ
>WENV170516064 CEWB01078953 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 240 313 + Met CAT [ENA] ¢þ
>WENV170639212 JFJP01001700 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 31174 31099 - Met CAT [ENA] ¢þ
>WENV170805707 MDSW01069367 [MDSW] marine metagenome; seawater 10312 10385 + Met CAT [ENA] ¢þ
>WENV170806995 MDSW01090924 [MDSW] marine metagenome; seawater 7111 7184 + Met CAT [ENA] ¢þ
>WENV170817004 MDSX01041960 [MDSX] marine metagenome; seawater 1598 1671 + Met CAT [ENA] ¢þ
>WENV170847223 MDTA01056597 [MDTA] marine metagenome; seawater 3342 3415 + Met CAT [ENA] ¢þ
>CHL1810002649 GU591327 Alveolata Durinskia baltica CS-38 (GU591327) 24519 24443 - Met CAT [ENA] ¡û
>CHL1810002675 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 27112 27037 - Met CAT [ENA] ¡û
>CHL1810005296 JQ088178 Stramenopiles Ulnaria acus (JQ088178) 22276 22349 + Met CAT [ENA] ¡û
>CHL1810008325 KC509522 Stramenopiles Cylindrotheca closterium ccmp1855 (KC509522) 36929 37002 + Met CAT [ENA] ¡û
>CHL1810008370 KC509523 Stramenopiles Didymosphenia geminata BCC011 (KC509523) 24905 24830 - Met CAT [ENA] ¡û
>CHL1810010641 KF733443 Stramenopiles Eunotia naegelii utex FD354 (KF733443) 35412 35337 - Met CAT [ENA] ¡û
>CHL1810013668 KJ958482 Stramenopiles Rhizosolenia imbricata (KJ958482) 13662 13587 - Met CAT [ENA] ¡û
>CHL1810034272 KX619437 Stramenopiles Toxarium undulatum ECT3802 (KX619437) 63043 63116 + Met CAT [ENA] ¡û
>CHL1810034279 KX619437 Stramenopiles Toxarium undulatum ECT3802 (KX619437) 136884 136811 - Met CAT [ENA] ¡û
>CHL1810059316 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 66918 66845 - Met CAT [ENA] ¡û
>CHL1810059426 MG755800 Stramenopiles Entomoneis sp. (MG755800) 24779 24704 - Met CAT [ENA] ¡û
>CHL1810059450 MG755801 Stramenopiles Triceratium dubium (MG755801) 57149 57076 - Met CAT [ENA] ¡û
>CHL1810059487 MG755802 Stramenopiles Rhizosolenia fallax (MG755802) 13821 13748 - Met CAT [ENA] ¡û
>CHL090102742 EF067920 stramenopiles Phaeodactylum tricornutum 24860 24785 - Met CAT [ENA] ¡û
>CHL090103358 Z67753 stramenopiles Odontella sinensis 62586 62659 + Met CAT [ENA] ¡û
>ENV09000193 ABSN01026862 Freshwater sediment metagenome lwFormaldehyde_C1 528 603 + Met CAT [ENA] ¡û
Identical group No.523653 (6 seq.)
>CHL1830002584 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 43290 43362 + Met CAT [ENA] ¡û
>CHL1830002603 MG755801 Stramenopiles Triceratium dubium (MG755801) 54216 54288 + Met CAT [ENA] ¡û
>CHL1830002610 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 49312 49384 + Met CAT [ENA] ¡û
>CHL090200123 EF067920 stramenopiles Phaeodactylum tricornutum 17663 17735 + Met CAT [ENA] ¡û
>CHL090200125 EF067921 stramenopiles Thalassiosira pseudonana 49637 49709 + Met CAT [ENA] ¡û
>CHL090200174 Z67753 stramenopiles Odontella sinensis 65452 65380 - Met CAT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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