tRNA genes clustered and arranged according to each identical group

stramenopiles

Anticodon = CCG

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.460409 (43 seq.)
>WENV180108801 OAPI01000305 [OAPI] marine metagenome; ENVO.00002150 294 222 - Arg CCG [ENA] ¢þ
>WENV180109337 OAPJ01084294 [OAPJ] marine metagenome; ENVO 00002150 21 95 + Arg CCG [ENA] ¢þ
>WENV180208845 OBAJ01061107 [OBAJ] marine metagenome; Coastal water 296 370 + Arg CCG [ENA] ¢þ
>WENV180209039 OBAK01008621 [OBAK] marine metagenome; ENVO.00002150 135 63 - Arg CCG [ENA] ¢þ
>WENV180360250 OBNT01031062 [OBNT] marine metagenome; Sea Water 215 143 - Arg CCG [ENA] ¢þ
>WENV180362844 OBNX01051979 [OBNX] marine metagenome; ENVO:00002010 379 307 - Arg CCG [ENA] ¢þ
>WENV180363188 OBNY01005422 [OBNY] marine metagenome; ENVO:00002010 531 459 - Arg CCG [ENA] ¢þ
>WENV180364234 OBNZ01161958 [OBNZ] marine metagenome; ENVO:00002010 184 112 - Arg CCG [ENA] ¢þ
>WENV180364968 OBOB01000890 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 154 226 + Arg CCG [ENA] ¢þ
>WENV180365736 OBOC01023090 [OBOC] marine metagenome; ocean water 174 102 - Arg CCG [ENA] ¢þ
>WENV180366994 OBOE01002763 [OBOE] marine metagenome; ENVO:00002010 625 553 - Arg CCG [ENA] ¢þ
>WENV180368647 OBOF01174733 [OBOF] marine metagenome; ENVO:00002010 208 280 + Arg CCG [ENA] ¢þ
>WENV180368793 OBOG01000671 [OBOG] marine metagenome; seawater 1390 1462 + Arg CCG [ENA] ¢þ
>WENV180375944 OBOL01140337 [OBOL] marine metagenome; Surface water 106 34 - Arg CCG [ENA] ¢þ
>WENV180376592 OBOM01034779 [OBOM] marine metagenome; Seawater 409 481 + Arg CCG [ENA] ¢þ
>WENV180383403 OBOU01069550 [OBOU] marine metagenome; ENV:00002010 165 93 - Arg CCG [ENA] ¢þ
>WENV180393108 OBPP01076723 [OBPP] marine metagenome; ENVO:00002042 356 284 - Arg CCG [ENA] ¢þ
>WENV180394499 OBPS01011040 [OBPS] marine metagenome; ENVO:00002010 seawater 544 472 - Arg CCG [ENA] ¢þ
>WENV180395718 OBPT01094356 [OBPT] marine metagenome; ENVO:00002010 seawater 18 90 + Arg CCG [ENA] ¢þ
>WENV180591202 OCOV01003503 [OCOV] marine metagenome; ENVO:01000301 526 454 - Arg CCG [ENA] ¢þ
>WENV180593981 OCOY01007918 [OCOY] marine metagenome; ENVO:00002010 212 140 - Arg CCG [ENA] ¢þ
>WENV181092485 OEBK01003090 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 778 706 - Arg CCG [ENA] ¢þ
>WENV181367126 OFPU01000446 [OFPU] freshwater metagenome; Freshwater Lake 140 68 - Arg CCG [ENA] ¢þ
>WENV183055562 OLHD01002153 [OLHD] seawater metagenome; Sea water 133 61 - Arg CCG [ENA] ¢þ
>WENV170306059 CESI01306999 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1138 1210 + Arg CCG [ENA] ¢þ
>WENV170325982 CEST01081006 [CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2260 2188 - Arg CCG [ENA] ¢þ
>WENV170533938 CEWO01177015 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 338 266 - Arg CCG [ENA] ¢þ
>WENV170623158 FUWD013139066 [FUWD] metagenome; unknown 583 511 - Arg CCG [ENA] ¢þ
>WENV170631396 FUWD013350693 [FUWD] metagenome; unknown 4825 4753 - Arg CCG [ENA] ¢þ
>WENV170647133 JQIA01012651 [JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead 3591 3663 + Arg CCG [ENA] ¢þ
>WENV170810583 MDSW01151423 [MDSW] marine metagenome; seawater 7638 7710 + Arg CCG [ENA] ¢þ
>WENV170827498 MDSY01130366 [MDSY] marine metagenome; seawater 3415 3343 - Arg CCG [ENA] ¢þ
>CHL1810013635 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 27025 26951 - Arg CCG [ENA] ¡û
>CHL1810013696 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 6364 6292 - Arg CCG [ENA] ¡û
>CHL1810013751 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 6403 6331 - Arg CCG [ENA] ¡û
>CHL1810059271 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 23912 23984 + Arg CCG [ENA] ¡û
>CHL1810059321 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 25148 25076 - Arg CCG [ENA] ¡û
>CHL1810059346 MG755796 Stramenopiles Guinardia striata (MG755796) 37571 37499 - Arg CCG [ENA] ¡û
>CHL1810059381 MG755799 Stramenopiles Actinocyclus subtilis (MG755799) 23716 23788 + Arg CCG [ENA] ¡û
>CHL1810059456 MG755801 Stramenopiles Triceratium dubium (MG755801) 24073 24001 - Arg CCG [ENA] ¡û
>CHL1810059543 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 6340 6268 - Arg CCG [ENA] ¡û
>CHL090102773 EF067921 stramenopiles Thalassiosira pseudonana 6547 6475 - Arg CCG [ENA] ¡û
>CHL090103364 Z67753 stramenopiles Odontella sinensis 95722 95794 + Arg CCG [ENA] ¡û
Identical group No.588599 (2 seq.)
>WENV180375147 OBOK01137092 [OBOK] marine metagenome; seawater 327 255 - Arg CCG [ENA] ¢þ
>CHL090102725 EF067920 stramenopiles Phaeodactylum tricornutum 30013 30085 + Arg CCG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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