tRNA genes clustered and arranged according to each identical group

stramenopiles

Anticodon = GAA

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.460407 (91 seq.)
>WENV180015503 FQKF010769938 [FQKF] soil metagenome; Soil 73 145 + Phe GAA [ENA] ¢þ
>WENV180036775 FVAA010321477 [FVAA] soil metagenome; Soil 73 1 - Phe GAA [ENA] ¢þ
>WENV180038602 LLBY010000546 [LLBY] soil metagenome; soil from tomato rhizosphere 48372 48300 - Phe GAA [ENA] ¢þ
>WENV180041029 LLBZ010035765 [LLBZ] soil metagenome; soil from tomato rhizosphere 1213 1141 - Phe GAA [ENA] ¢þ
>WENV180102560 OAOY01072848 [OAOY] marine metagenome; Water 185 257 + Phe GAA [ENA] ¢þ
>WENV180113607 OAPR01001565 [OAPR] marine metagenome; seawater 127 199 + Phe GAA [ENA] ¢þ
>WENV180115166 OAPS01146269 [OAPS] marine metagenome; sea water 105 33 - Phe GAA [ENA] ¢þ
>WENV180212463 OBAN01054354 [OBAN] marine metagenome; ENVO 00002150 68 140 + Phe GAA [ENA] ¢þ
>WENV180275112 OBHS01010253 [OBHS] metagenome; freshwater sediment 261 189 - Phe GAA [ENA] ¢þ
>WENV180294500 OBIY01195481 [OBIY] beach sand metagenome; beach sand 81 155 + Phe GAA [ENA] ¢þ
>WENV180366995 OBOE01002816 [OBOE] marine metagenome; ENVO:00002010 99 171 + Phe GAA [ENA] ¢þ
>WENV180368256 OBOF01044914 [OBOF] marine metagenome; ENVO:00002010 421 493 + Phe GAA [ENA] ¢þ
>WENV180369490 OBOG01135857 [OBOG] marine metagenome; seawater 100 172 + Phe GAA [ENA] ¢þ
>WENV180375515 OBOL01018472 [OBOL] marine metagenome; Surface water 644 572 - Phe GAA [ENA] ¢þ
>WENV180376464 OBOM01011348 [OBOM] marine metagenome; Seawater 32 104 + Phe GAA [ENA] ¢þ
>WENV180391855 OBPN01066667 [OBPN] marine metagenome; seawater 317 389 + Phe GAA [ENA] ¢þ
>WENV180650262 OCSY01001766 [OCSY] marine metagenome; 30 L Plastic container 874 802 - Phe GAA [ENA] ¢þ
>WENV181162619 OEIO01002564 [OEIO] marine metagenome; sea ice 1029 957 - Phe GAA [ENA] ¢þ
>WENV181322174 OFKP01017566 [OFKP] marine metagenome; sea ice 329 401 + Phe GAA [ENA] ¢þ
>WENV181322747 OFKU01007473 [OFKU] marine metagenome; sea ice 500 572 + Phe GAA [ENA] ¢þ
>WENV181322838 OFKV01001081 [OFKV] marine metagenome; sea ice 1506 1578 + Phe GAA [ENA] ¢þ
>WENV181372318 OFQW01044810 [OFQW] wastewater metagenome; Exp Tend NO 90WW 102 174 + Phe GAA [ENA] ¢þ
>WENV181391187 OFRQ01058550 [OFRQ] seawater metagenome; seawater 217 289 + Phe GAA [ENA] ¢þ
>WENV181391609 OFRT01027807 [OFRT] seawater metagenome; seawater 95 167 + Phe GAA [ENA] ¢þ
>WENV181415602 OGCL01016161 [OGCL] hot springs metagenome; Hot spring water 1868 1940 + Phe GAA [ENA] ¢þ
>WENV183055631 OLHD01009342 [OLHD] seawater metagenome; Sea water 167 239 + Phe GAA [ENA] ¢þ
>WENV183060090 OLHW01010890 [OLHW] seawater metagenome; Sea water 751 679 - Phe GAA [ENA] ¢þ
>WENV183615316 OOEB01002861 [OOEB] marine metagenome; sea ice 1320 1248 - Phe GAA [ENA] ¢þ
>WENV183615896 OOEC01001598 [OOEC] marine metagenome; sea ice 675 603 - Phe GAA [ENA] ¢þ
>WENV183616762 OOEE01000337 [OOEE] marine metagenome; sea ice 1519 1447 - Phe GAA [ENA] ¢þ
>WENV183617538 OOEG01005804 [OOEG] marine metagenome; sea ice 934 862 - Phe GAA [ENA] ¢þ
>WENV183619955 OOFR01000812 [OOFR] marine metagenome; seawater 1323 1395 + Phe GAA [ENA] ¢þ
>WENV183620553 OOFS01001728 [OOFS] marine metagenome; sea ice 1563 1635 + Phe GAA [ENA] ¢þ
>WENV183621122 OOFT01007309 [OOFT] marine metagenome; sea ice 155 227 + Phe GAA [ENA] ¢þ
>WENV183621344 OOFT01059026 [OOFT] marine metagenome; sea ice 523 451 - Phe GAA [ENA] ¢þ
>WENV183621451 OOFU01001318 [OOFU] marine metagenome; sea ice 2229 2301 + Phe GAA [ENA] ¢þ
>WENV183621725 OOFU01041744 [OOFU] marine metagenome; sea ice 387 315 - Phe GAA [ENA] ¢þ
>WENV183622287 OOFV01021307 [OOFV] marine metagenome; seawater 387 313 - Phe GAA [ENA] ¢þ
>WENV183622594 OOFW01000003 [OOFW] marine metagenome; sea ice 6548 6476 - Phe GAA [ENA] ¢þ
>WENV183622971 OOFX01000163 [OOFX] marine metagenome; sea ice 5318 5246 - Phe GAA [ENA] ¢þ
>WENV183623364 OOFY01000828 [OOFY] marine metagenome; sea ice 133 205 + Phe GAA [ENA] ¢þ
>WENV183623667 OOGA01031497 [OOGA] marine metagenome; sea ice 503 431 - Phe GAA [ENA] ¢þ
>WENV183624485 OOGD01018647 [OOGD] marine metagenome; sea ice 198 270 + Phe GAA [ENA] ¢þ
>WENV183624839 OOGE01017719 [OOGE] marine metagenome; sea ice 179 251 + Phe GAA [ENA] ¢þ
>WENV183626295 OOGH01060182 [OOGH] marine metagenome; seawater 217 289 + Phe GAA [ENA] ¢þ
>WENV183628116 OOGM01020242 [OOGM] marine metagenome; sea ice 475 403 - Phe GAA [ENA] ¢þ
>WENV183628221 OOGN01000067 [OOGN] marine metagenome; sea ice 7391 7319 - Phe GAA [ENA] ¢þ
>WENV183628684 OOGO01007872 [OOGO] marine metagenome; sea ice 510 582 + Phe GAA [ENA] ¢þ
>WENV183630782 OOGU01002307 [OOGU] marine metagenome; sea ice 162 234 + Phe GAA [ENA] ¢þ
>WENV170275901 CERM01231465 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1558 1486 - Phe GAA [ENA] ¢þ
>WENV170305110 CESI01112591 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1800 1728 - Phe GAA [ENA] ¢þ
>WENV170325204 CEST01002712 [CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 29847 29775 - Phe GAA [ENA] ¢þ
>WENV170516488 CEWB01135233 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 472 400 - Phe GAA [ENA] ¢þ
>WENV170533467 CEWO01132192 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5043 4971 - Phe GAA [ENA] ¢þ
>WENV170533937 CEWO01177015 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1919 1991 + Phe GAA [ENA] ¢þ
>WENV170539718 CEWR01286313 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 70 144 + Phe GAA [ENA] ¢þ
>WENV170569462 FLMP01209607 [FLMP] seawater metagenome; seawater 70 142 + Phe GAA [ENA] ¢þ
>WENV170608367 FUWD010928923 [FUWD] metagenome; unknown 13 85 + Phe GAA [ENA] ¢þ
>WENV170639210 JFJP01001700 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 35219 35147 - Phe GAA [ENA] ¢þ
>WENV170639219 JFJP01001701 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 13282 13210 - Phe GAA [ENA] ¢þ
>WENV170807350 MDSW01097126 [MDSW] marine metagenome; seawater 5233 5161 - Phe GAA [ENA] ¢þ
>WENV170810585 MDSW01151423 [MDSW] marine metagenome; seawater 6057 5985 - Phe GAA [ENA] ¢þ
>WENV170814973 MDSX01002410 [MDSX] marine metagenome; seawater 6965 6893 - Phe GAA [ENA] ¢þ
>WENV170827496 MDSY01130366 [MDSY] marine metagenome; seawater 4946 5018 + Phe GAA [ENA] ¢þ
>WENV170919354 MDTF01008253 [MDTF] marine metagenome; seawater 124 198 + Phe GAA [ENA] ¢þ
>CHL1810000382 AP011960 Stramenopiles Fistulifera solaris JPCC DA0580 (AP011960) 12945 13017 + Phe GAA [ENA] ¡û
>CHL1810002647 GU591327 Alveolata Durinskia baltica CS-38 (GU591327) 28010 27938 - Phe GAA [ENA] ¡û
>CHL1810002673 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 30562 30490 - Phe GAA [ENA] ¡û
>CHL1810005312 JQ088178 Stramenopiles Ulnaria acus (JQ088178) 27491 27419 - Phe GAA [ENA] ¡û
>CHL1810008284 KC509520 Stramenopiles Asterionellopsis glacialis ccmp1717 (KC509520) 37057 36983 - Phe GAA [ENA] ¡û
>CHL1810008318 KC509521 Stramenopiles Coscinodiscus radiatus ccmp310 (KC509521) 22310 22238 - Phe GAA [ENA] ¡û
>CHL1810008323 KC509522 Stramenopiles Cylindrotheca closterium ccmp1855 (KC509522) 32510 32582 + Phe GAA [ENA] ¡û
>CHL1810008368 KC509523 Stramenopiles Didymosphenia geminata BCC011 (KC509523) 28419 28347 - Phe GAA [ENA] ¡û
>CHL1810008398 KC509524 Stramenopiles Leptocylindrus danicus ccmp1856 (KC509524) 18744 18672 - Phe GAA [ENA] ¡û
>CHL1810008406 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 26083 26155 + Phe GAA [ENA] ¡û
>CHL1810010639 KF733443 Stramenopiles Eunotia naegelii utex FD354 (KF733443) 38841 38769 - Phe GAA [ENA] ¡û
>CHL1810013613 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 28574 28646 + Phe GAA [ENA] ¡û
>CHL1810013700 KJ958484 Stramenopiles Cerataulina daemon (KJ958484) 29117 29189 + Phe GAA [ENA] ¡û
>CHL1810034289 KX619437 Stramenopiles Toxarium undulatum ECT3802 (KX619437) 26905 26831 - Phe GAA [ENA] ¡û
>CHL1810059244 MG755792 Stramenopiles Plagiogramma staurophorum (MG755792) 36472 36544 + Phe GAA [ENA] ¡û
>CHL1810059291 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 22557 22485 - Phe GAA [ENA] ¡û
>CHL1810059296 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 26801 26873 + Phe GAA [ENA] ¡û
>CHL1810059327 MG755796 Stramenopiles Guinardia striata (MG755796) 39164 39236 + Phe GAA [ENA] ¡û
>CHL1810059357 MG755798 Stramenopiles Attheya longicornis (MG755798) 41806 41878 + Phe GAA [ENA] ¡û
>CHL1810059401 MG755799 Stramenopiles Actinocyclus subtilis (MG755799) 22258 22186 - Phe GAA [ENA] ¡û
>CHL1810059424 MG755800 Stramenopiles Entomoneis sp. (MG755800) 28374 28302 - Phe GAA [ENA] ¡û
>CHL1810059431 MG755801 Stramenopiles Triceratium dubium (MG755801) 25657 25730 + Phe GAA [ENA] ¡û
>CHL1810059495 MG755803 Stramenopiles Psammoneis obaidii (MG755803) 46118 46190 + Phe GAA [ENA] ¡û
>CHL1810059592 MG755806 Stramenopiles Biddulphia tridens (MG755806) 40242 40169 - Phe GAA [ENA] ¡û
>CHL090102740 EF067920 stramenopiles Phaeodactylum tricornutum 28404 28332 - Phe GAA [ENA] ¡û
>CHL090103366 Z67753 stramenopiles Odontella sinensis 94256 94184 - Phe GAA [ENA] ¡û
Identical group No.504514 (13 seq.)
>WENV180112746 OAPP01092126 [OAPP] marine metagenome; Surface water 246 174 - Phe GAA [ENA] ¢þ
>WENV180365303 OBOB01070076 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 390 318 - Phe GAA [ENA] ¢þ
>WENV180591317 OCOV01011092 [OCOV] marine metagenome; ENVO:01000301 701 629 - Phe GAA [ENA] ¢þ
>WENV180637834 OCRG01146994 [OCRG] marine metagenome; seawater 353 281 - Phe GAA [ENA] ¢þ
>WENV181306842 OFIN01004085 [OFIN] marine metagenome; sea ice 472 544 + Phe GAA [ENA] ¢þ
>WENV183615270 OOEB01000512 [OOEB] marine metagenome; sea ice 2165 2093 - Phe GAA [ENA] ¢þ
>WENV183617997 OOFL01001141 [OOFL] marine metagenome; seawater 181 253 + Phe GAA [ENA] ¢þ
>WENV183624989 OOGE01055865 [OOGE] marine metagenome; sea ice 200 272 + Phe GAA [ENA] ¢þ
>CHL1810013672 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 23510 23582 + Phe GAA [ENA] ¡û
>CHL1810013727 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 23131 23203 + Phe GAA [ENA] ¡û
>CHL1810059519 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 23248 23320 + Phe GAA [ENA] ¡û
>CHL090102749 EF067921 stramenopiles Thalassiosira pseudonana 23395 23467 + Phe GAA [ENA] ¡û
>ENV09000426 ABSN01067448 Freshwater sediment metagenome lwFormaldehyde_C1 267 339 + Phe GAA [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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