tRNA genes clustered and arranged according to each identical group

stramenopiles

Anticodon = GCA

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.783352 (62 seq.)
>WENV180081514 MPMC02123220 [MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter 1050 1120 + Cys GCA [ENA] ¢þ
>WENV180108911 OAPI01024259 [OAPI] marine metagenome; ENVO.00002150 255 325 + Cys GCA [ENA] ¢þ
>WENV180110435 OAPM01055596 [OAPM] marine metagenome; ENVO.00002110 307 379 + Cys GCA [ENA] ¢þ
>WENV180113856 OAPR01038592 [OAPR] marine metagenome; seawater 423 495 + Cys GCA [ENA] ¢þ
>WENV180209302 OBAK01062989 [OBAK] marine metagenome; ENVO.00002150 263 193 - Cys GCA [ENA] ¢þ
>WENV180212314 OBAN01005780 [OBAN] marine metagenome; ENVO 00002150 532 602 + Cys GCA [ENA] ¢þ
>WENV180365017 OBOB01003095 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 280 210 - Cys GCA [ENA] ¢þ
>WENV180368774 OBOG01000273 [OBOG] marine metagenome; seawater 270 200 - Cys GCA [ENA] ¢þ
>WENV180374636 OBOK01003531 [OBOK] marine metagenome; seawater 103 173 + Cys GCA [ENA] ¢þ
>WENV180383731 OBOV01012773 [OBOV] marine metagenome; ENV:00002010 326 256 - Cys GCA [ENA] ¢þ
>WENV180391795 OBPN01048832 [OBPN] marine metagenome; seawater 182 252 + Cys GCA [ENA] ¢þ
>WENV180591449 OCOV01022836 [OCOV] marine metagenome; ENVO:01000301 470 400 - Cys GCA [ENA] ¢þ
>WENV180594175 OCOY01079448 [OCOY] marine metagenome; ENVO:00002010 8 78 + Cys GCA [ENA] ¢þ
>WENV180650345 OCSY01010897 [OCSY] marine metagenome; 30 L Plastic container 554 484 - Cys GCA [ENA] ¢þ
>WENV180650607 OCSY01094128 [OCSY] marine metagenome; 30 L Plastic container 171 98 - Cys GCA [ENA] ¢þ
>WENV181162613 OEIO01002399 [OEIO] marine metagenome; sea ice 438 368 - Cys GCA [ENA] ¢þ
>WENV181320971 OFKJ01004533 [OFKJ] marine metagenome; sea ice 548 478 - Cys GCA [ENA] ¢þ
>WENV181322437 OFKR01008028 [OFKR] marine metagenome; sea ice 504 434 - Cys GCA [ENA] ¢þ
>WENV181322708 OFKU01000069 [OFKU] marine metagenome; sea ice 2329 2259 - Cys GCA [ENA] ¢þ
>WENV181322833 OFKV01000362 [OFKV] marine metagenome; sea ice 1239 1169 - Cys GCA [ENA] ¢þ
>WENV181324679 OFLG01003854 [OFLG] seawater metagenome; seawater 248 318 + Cys GCA [ENA] ¢þ
>WENV183055646 OLHD01011204 [OLHD] seawater metagenome; Sea water 446 519 + Cys GCA [ENA] ¢þ
>WENV183615451 OOEB01019182 [OOEB] marine metagenome; sea ice 301 231 - Cys GCA [ENA] ¢þ
>WENV183615883 OOEC01000474 [OOEC] marine metagenome; sea ice 638 708 + Cys GCA [ENA] ¢þ
>WENV183616756 OOEE01000296 [OOEE] marine metagenome; sea ice 4026 4096 + Cys GCA [ENA] ¢þ
>WENV183617463 OOEG01000504 [OOEG] marine metagenome; sea ice 235 305 + Cys GCA [ENA] ¢þ
>WENV183620961 OOFT01000664 [OOFT] marine metagenome; sea ice 3302 3232 - Cys GCA [ENA] ¢þ
>WENV183621178 OOFT01014471 [OOFT] marine metagenome; sea ice 906 836 - Cys GCA [ENA] ¢þ
>WENV183622753 OOFW01005566 [OOFW] marine metagenome; sea ice 1283 1353 + Cys GCA [ENA] ¢þ
>WENV183622964 OOFX01000061 [OOFX] marine metagenome; sea ice 3422 3492 + Cys GCA [ENA] ¢þ
>WENV183623573 OOGA01012522 [OOGA] marine metagenome; sea ice 377 447 + Cys GCA [ENA] ¢þ
>WENV183624224 OOGC01003896 [OOGC] marine metagenome; seawater 248 318 + Cys GCA [ENA] ¢þ
>WENV183624373 OOGD01003963 [OOGD] marine metagenome; sea ice 733 803 + Cys GCA [ENA] ¢þ
>WENV183624895 OOGE01029866 [OOGE] marine metagenome; sea ice 323 253 - Cys GCA [ENA] ¢þ
>WENV183624904 OOGE01032229 [OOGE] marine metagenome; sea ice 477 547 + Cys GCA [ENA] ¢þ
>WENV183625669 OOGG01007102 [OOGG] marine metagenome; sea ice 768 698 - Cys GCA [ENA] ¢þ
>WENV183627990 OOGM01000325 [OOGM] marine metagenome; sea ice 2615 2685 + Cys GCA [ENA] ¢þ
>WENV183628233 OOGN01000351 [OOGN] marine metagenome; sea ice 170 100 - Cys GCA [ENA] ¢þ
>WENV183628523 OOGO01000556 [OOGO] marine metagenome; sea ice 2217 2287 + Cys GCA [ENA] ¢þ
>WENV183630725 OOGU01001039 [OOGU] marine metagenome; sea ice 1678 1608 - Cys GCA [ENA] ¢þ
>WENV170440972 CEUV01141085 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 430 358 - Cys GCA [ENA] ¢þ
>WENV170531901 CEWO01004894 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 8415 8485 + Cys GCA [ENA] ¢þ
>WENV170569671 FLMP01267083 [FLMP] seawater metagenome; seawater 3 73 + Cys GCA [ENA] ¢þ
>WENV170604382 FUWD010391868 [FUWD] metagenome; unknown 107 177 + Cys GCA [ENA] ¢þ
>WENV170639228 JFJP01001702 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 24921 24851 - Cys GCA [ENA] ¢þ
>WENV170639260 JFJP01001713 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 1969 1899 - Cys GCA [ENA] ¢þ
>WENV170807203 MDSW01094513 [MDSW] marine metagenome; seawater 221 151 - Cys GCA [ENA] ¢þ
>WENV170819129 MDSX01086166 [MDSX] marine metagenome; seawater 10080 10150 + Cys GCA [ENA] ¢þ
>WENV170896922 MDTD01103014 [MDTD] marine metagenome; seawater 13223 13295 + Cys GCA [ENA] ¢þ
>CHL1810002580 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 121509 121579 + Cys GCA [ENA] ¡û
>CHL1810002586 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 90580 90510 - Cys GCA [ENA] ¡û
>CHL1810002664 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 100602 100672 + Cys GCA [ENA] ¡û
>CHL1810008311 KC509521 Stramenopiles Coscinodiscus radiatus ccmp310 (KC509521) 103990 103919 - Cys GCA [ENA] ¡û
>CHL1810008359 KC509523 Stramenopiles Didymosphenia geminata BCC011 (KC509523) 76402 76472 + Cys GCA [ENA] ¡û
>CHL1810008391 KC509524 Stramenopiles Leptocylindrus danicus ccmp1856 (KC509524) 100465 100392 - Cys GCA [ENA] ¡û
>CHL1810013628 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 94239 94169 - Cys GCA [ENA] ¡û
>CHL1810013711 KJ958484 Stramenopiles Cerataulina daemon (KJ958484) 106975 106902 - Cys GCA [ENA] ¡û
>CHL1810019274 KR709240 Stramenopiles Pseudo-nitzschia multiseries (KR709240) 19843 19915 + Cys GCA [ENA] ¡û
>CHL1810059257 MG755792 Stramenopiles Plagiogramma staurophorum (MG755792) 160247 160177 - Cys GCA [ENA] ¡û
>CHL1810059280 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 76152 76223 + Cys GCA [ENA] ¡û
>CHL1810059333 MG755796 Stramenopiles Guinardia striata (MG755796) 77074 77144 + Cys GCA [ENA] ¡û
>CHL090102766 EF067921 stramenopiles Thalassiosira pseudonana 105977 105907 - Cys GCA [ENA] ¡û
Identical group No.793276 (13 seq.)
>WENV180363498 OBNY01077708 [OBNY] marine metagenome; ENVO:00002010 137 67 - Cys GCA [ENA] ¢þ
>WENV180365905 OBOC01064170 [OBOC] marine metagenome; ocean water 72 2 - Cys GCA [ENA] ¢þ
>WENV181367137 OFPU01001301 [OFPU] freshwater metagenome; Freshwater Lake 203 273 + Cys GCA [ENA] ¢þ
>WENV181395852 OFSB01010310 [OFSB] freshwater metagenome; Freshwater Lake 236 165 - Cys GCA [ENA] ¢þ
>WENV182565544 OJEH01011782 [OJEH] seawater metagenome; Sea water 25 95 + Cys GCA [ENA] ¢þ
>WENV170534048 CEWO01184260 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1681 1611 - Cys GCA [ENA] ¢þ
>WENV170639230 JFJP01001703 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 5858 5928 + Cys GCA [ENA] ¢þ
>WENV170809198 MDSW01127939 [MDSW] marine metagenome; seawater 1716 1646 - Cys GCA [ENA] ¢þ
>CHL1810008419 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 95216 95146 - Cys GCA [ENA] ¡û
>CHL1810013689 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 104506 104436 - Cys GCA [ENA] ¡û
>CHL1810059312 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 121424 121354 - Cys GCA [ENA] ¡û
>CHL1810059536 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 105894 105824 - Cys GCA [ENA] ¡û
>CHL090103354 Z67753 stramenopiles Odontella sinensis 13780 13850 + Cys GCA [ENA] ¡û
Identical group No.833994 (1 seq.)
>CHL090102735 EF067920 stramenopiles Phaeodactylum tricornutum 104713 104643 - Cys GCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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