tRNA genes clustered and arranged according to each identical group

stramenopiles

Anticodon = GTC

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.279104 (76 seq.)
>WENV015513 AACY020436935 Marine microbial communities from Global Ocean Sampling (GOS) 416 338 - Asp GTC [ENA]
>WENV180038595 LLBY010000546 [LLBY] soil metagenome; soil from tomato rhizosphere 33182 33257 + Asp GTC [ENA] ¢þ
>WENV180040787 LLBZ010014679 [LLBZ] soil metagenome; soil from tomato rhizosphere 14003 13928 - Asp GTC [ENA] ¢þ
>WENV180104538 OAPC01023661 [OAPC] marine metagenome; na 360 287 - Asp GTC [ENA] ¢þ
>WENV180110348 OAPM01019912 [OAPM] marine metagenome; ENVO.00002110 180 105 - Asp GTC [ENA] ¢þ
>WENV180113731 OAPR01015026 [OAPR] marine metagenome; seawater 128 55 - Asp GTC [ENA] ¢þ
>WENV180310113 OBJS01227963 [OBJS] beach sand metagenome; beach sand 182 107 - Asp GTC [ENA] ¢þ
>WENV180357425 OBNN01008941 [OBNN] marine metagenome; Coastal water 596 521 - Asp GTC [ENA] ¢þ
>WENV180359389 OBNR01066555 [OBNR] marine metagenome; Seawater_00002010_00002149 214 139 - Asp GTC [ENA] ¢þ
>WENV180360368 OBNT01069884 [OBNT] marine metagenome; Sea Water 135 210 + Asp GTC [ENA] ¢þ
>WENV180365015 OBOB01003039 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 218 293 + Asp GTC [ENA] ¢þ
>WENV180367193 OBOE01021284 [OBOE] marine metagenome; ENVO:00002010 128 55 - Asp GTC [ENA] ¢þ
>WENV180368057 OBOF01020484 [OBOF] marine metagenome; ENVO:00002010 341 266 - Asp GTC [ENA] ¢þ
>WENV180368970 OBOG01011220 [OBOG] marine metagenome; seawater 165 240 + Asp GTC [ENA] ¢þ
>WENV180375294 OBOL01001474 [OBOL] marine metagenome; Surface water 628 553 - Asp GTC [ENA] ¢þ
>WENV180376468 OBOM01012139 [OBOM] marine metagenome; Seawater 658 585 - Asp GTC [ENA] ¢þ
>WENV180381639 OBOS01006118 [OBOS] marine metagenome; ENVO 00002150 347 421 + Asp GTC [ENA] ¢þ
>WENV180394193 OBPR01093264 [OBPR] marine metagenome; ENVO:00002042 124 49 - Asp GTC [ENA] ¢þ
>WENV180396728 OBPV01072980 [OBPV] marine metagenome; ENVO:00002010 135 60 - Asp GTC [ENA] ¢þ
>WENV180594081 OCOY01028669 [OCOY] marine metagenome; ENVO:00002010 96 21 - Asp GTC [ENA] ¢þ
>WENV180637070 OCRF01192134 [OCRF] marine metagenome; niskin bottle 3 78 + Asp GTC [ENA] ¢þ
>WENV180639121 OCRI01136050 [OCRI] marine metagenome; Sterile flask 125 52 - Asp GTC [ENA] ¢þ
>WENV180642145 OCRN01253437 [OCRN] marine metagenome; ENVO:00002010, 'SEA WATER 306 231 - Asp GTC [ENA] ¢þ
>WENV181322402 OFKR01002320 [OFKR] marine metagenome; sea ice 666 741 + Asp GTC [ENA] ¢þ
>WENV181370437 OFQS01012638 [OFQS] freshwater metagenome; Freshwater Lake 124 197 + Asp GTC [ENA] ¢þ
>WENV181415511 OGCL01012784 [OGCL] hot springs metagenome; Hot spring water 825 900 + Asp GTC [ENA] ¢þ
>WENV183614972 OOEA01022436 [OOEA] marine metagenome; sea ice 450 523 + Asp GTC [ENA] ¢þ
>WENV183620947 OOFT01000304 [OOFT] marine metagenome; sea ice 1309 1234 - Asp GTC [ENA] ¢þ
>WENV183623351 OOFY01000040 [OOFY] marine metagenome; sea ice 652 727 + Asp GTC [ENA] ¢þ
>WENV183627732 OOGL01034907 [OOGL] marine metagenome; sea ice 331 406 + Asp GTC [ENA] ¢þ
>WENV170119498 CENJ01147529 [CENJ] marine metagenome genome assembly TARA_009_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 282 355 + Asp GTC [ENA] ¢þ
>WENV170137330 CENW01021797 [CENW] marine metagenome genome assembly TARA_032_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 107 180 + Asp GTC [ENA] ¢þ
>WENV170232182 CEQI01033841 [CEQI] marine metagenome genome assembly TARA_076_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 910 836 - Asp GTC [ENA] ¢þ
>WENV170251035 CEQT01048472 [CEQT] marine metagenome genome assembly TARA_072_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 127 201 + Asp GTC [ENA] ¢þ
>WENV170290781 CESA01052331 [CESA] marine metagenome genome assembly TARA_078_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 724 798 + Asp GTC [ENA] ¢þ
>WENV170533133 CEWO01099466 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 150 223 + Asp GTC [ENA] ¢þ
>WENV170603767 FUWD010333457 [FUWD] metagenome; unknown 272 347 + Asp GTC [ENA] ¢þ
>WENV170605280 FUWD010465635 [FUWD] metagenome; unknown 425 350 - Asp GTC [ENA] ¢þ
>WENV170605907 FUWD010563697 [FUWD] metagenome; unknown 364 291 - Asp GTC [ENA] ¢þ
>WENV170612859 FUWD012708002 [FUWD] metagenome; unknown 416 341 - Asp GTC [ENA] ¢þ
>WENV170639244 JFJP01001704 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 3305 3232 - Asp GTC [ENA] ¢þ
>WENV170639249 JFJP01001709 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 5299 5224 - Asp GTC [ENA] ¢þ
>WENV170639256 JFJP01001711 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 2850 2775 - Asp GTC [ENA] ¢þ
>WENV170813808 MDSW01206453 [MDSW] marine metagenome; seawater 273 346 + Asp GTC [ENA] ¢þ
>WENV170828540 MDSY01151648 [MDSY] marine metagenome; seawater 5922 5848 - Asp GTC [ENA] ¢þ
>WENV170833718 MDSZ01084747 [MDSZ] marine metagenome; seawater 11999 11926 - Asp GTC [ENA] ¢þ
>WENV170842868 MDSZ01248998 [MDSZ] marine metagenome; seawater 4805 4732 - Asp GTC [ENA] ¢þ
>WENV170867519 MDTB01147491 [MDTB] marine metagenome; seawater 4483 4557 + Asp GTC [ENA] ¢þ
>WENV170870029 MDTB01185499 [MDTB] marine metagenome; seawater 7265 7338 + Asp GTC [ENA] ¢þ
>WENV170912510 MDTE01121841 [MDTE] marine metagenome; seawater 4697 4624 - Asp GTC [ENA] ¢þ
>CHL1810000399 AP011960 Stramenopiles Fistulifera solaris JPCC DA0580 (AP011960) 115370 115445 + Asp GTC [ENA] ¡û
>CHL1810001014 EU168190 Stramenopiles Heterosigma akashiwo NIES 293 (EU168190) 100454 100527 + Asp GTC [ENA] ¡û
>CHL1810002592 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 42093 42018 - Asp GTC [ENA] ¡û
>CHL1810005295 JQ088178 Stramenopiles Ulnaria acus (JQ088178) 17349 17424 + Asp GTC [ENA] ¡û
>CHL1810008397 KC509524 Stramenopiles Leptocylindrus danicus ccmp1856 (KC509524) 57593 57520 - Asp GTC [ENA] ¡û
>CHL1810008411 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 49219 49292 + Asp GTC [ENA] ¡û
>CHL1810013619 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 56684 56759 + Asp GTC [ENA] ¡û
>CHL1810013676 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 49381 49454 + Asp GTC [ENA] ¡û
>CHL1810013731 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 49341 49414 + Asp GTC [ENA] ¡û
>CHL1810034271 KX619437 Stramenopiles Toxarium undulatum ECT3802 (KX619437) 47788 47861 + Asp GTC [ENA] ¡û
>CHL1810059243 MG755792 Stramenopiles Plagiogramma staurophorum (MG755792) 7986 8061 + Asp GTC [ENA] ¡û
>CHL1810059276 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 43547 43620 + Asp GTC [ENA] ¡û
>CHL1810059300 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 50700 50773 + Asp GTC [ENA] ¡û
>CHL1810059325 MG755796 Stramenopiles Guinardia striata (MG755796) 6753 6826 + Asp GTC [ENA] ¡û
>CHL1810059386 MG755799 Stramenopiles Actinocyclus subtilis (MG755799) 44093 44168 + Asp GTC [ENA] ¡û
>CHL1810059409 MG755800 Stramenopiles Entomoneis sp. (MG755800) 17821 17895 + Asp GTC [ENA] ¡û
>CHL1810059436 MG755801 Stramenopiles Triceratium dubium (MG755801) 54494 54567 + Asp GTC [ENA] ¡û
>CHL1810059494 MG755803 Stramenopiles Psammoneis obaidii (MG755803) 35962 36036 + Asp GTC [ENA] ¡û
>CHL1810059523 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 49570 49643 + Asp GTC [ENA] ¡û
>CHL1810059550 MG755805 Stramenopiles Biddulphia biddulphiana (MG755805) 17593 17666 + Asp GTC [ENA] ¡û
>CHL1810059577 MG755806 Stramenopiles Biddulphia tridens (MG755806) 19117 19190 + Asp GTC [ENA] ¡û
>CHL1810059601 MG755807 Stramenopiles Astrosyne radiata (MG755807) 10050 10125 + Asp GTC [ENA] ¡û
>CHL090102724 EF067920 stramenopiles Phaeodactylum tricornutum 17966 18041 + Asp GTC [ENA] ¡û
>CHL090102753 EF067921 stramenopiles Thalassiosira pseudonana 49895 49970 + Asp GTC [ENA] ¡û
>CHL090103371 Z67753 stramenopiles Odontella sinensis 65166 65093 - Asp GTC [ENA] ¡û
>ENV09000026 ABSN01001437 Freshwater sediment metagenome lwFormaldehyde_C1 412 338 - Asp GTC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK