tRNA genes clustered and arranged according to each identical group

stramenopiles

Anticodon = GTT

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.657733 (76 seq.)
>WENV180038843 LLBY010007956 [LLBY] soil metagenome; soil from tomato rhizosphere 27853 27782 - Asn GTT [ENA] ¢þ
>WENV180041362 LLBZ010106609 [LLBZ] soil metagenome; soil from tomato rhizosphere 2896 2825 - Asn GTT [ENA] ¢þ
>WENV180051397 MPLU02211135 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 163 92 - Asn GTT [ENA] ¢þ
>WENV180100625 OAOS01000800 [OAOS] marine metagenome; ENVO.00002110 791 862 + Asn GTT [ENA] ¢þ
>WENV180110323 OAPM01014711 [OAPM] marine metagenome; ENVO.00002110 342 271 - Asn GTT [ENA] ¢þ
>WENV180112909 OAPP01170035 [OAPP] marine metagenome; Surface water 225 154 - Asn GTT [ENA] ¢þ
>WENV180114832 OAPS01053476 [OAPS] marine metagenome; sea water 386 315 - Asn GTT [ENA] ¢þ
>WENV180212288 OBAN01003649 [OBAN] marine metagenome; ENVO 00002150 336 409 + Asn GTT [ENA] ¢þ
>WENV180294515 OBIY01207801 [OBIY] beach sand metagenome; beach sand 78 149 + Asn GTT [ENA] ¢þ
>WENV180309801 OBJS01043157 [OBJS] beach sand metagenome; beach sand 235 306 + Asn GTT [ENA] ¢þ
>WENV180357339 OBNN01003461 [OBNN] marine metagenome; Coastal water 1125 1052 - Asn GTT [ENA] ¢þ
>WENV180358963 OBNQ01076262 [OBNQ] marine metagenome; ENVO 00002150 211 140 - Asn GTT [ENA] ¢þ
>WENV180363187 OBNY01005255 [OBNY] marine metagenome; ENVO:00002010 878 807 - Asn GTT [ENA] ¢þ
>WENV180365110 OBOB01010906 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 367 296 - Asn GTT [ENA] ¢þ
>WENV180365613 OBOC01006788 [OBOC] marine metagenome; ocean water 613 540 - Asn GTT [ENA] ¢þ
>WENV180368848 OBOG01002641 [OBOG] marine metagenome; seawater 951 878 - Asn GTT [ENA] ¢þ
>WENV180383827 OBOV01034761 [OBOV] marine metagenome; ENV:00002010 155 84 - Asn GTT [ENA] ¢þ
>WENV180394818 OBPS01096061 [OBPS] marine metagenome; ENVO:00002010 seawater 26 97 + Asn GTT [ENA] ¢þ
>WENV180395518 OBPT01036250 [OBPT] marine metagenome; ENVO:00002010 seawater 153 224 + Asn GTT [ENA] ¢þ
>WENV180396683 OBPV01058467 [OBPV] marine metagenome; ENVO:00002010 95 22 - Asn GTT [ENA] ¢þ
>WENV180585729 OCOL01085639 [OCOL] marine metagenome; ENVO:00002010 181 254 + Asn GTT [ENA] ¢þ
>WENV180593227 OCOX01009300 [OCOX] marine metagenome; ENVO:00002010 585 658 + Asn GTT [ENA] ¢þ
>WENV180593995 OCOY01009349 [OCOY] marine metagenome; ENVO:00002010 913 840 - Asn GTT [ENA] ¢þ
>WENV180636375 OCRF01003010 [OCRF] marine metagenome; niskin bottle 906 833 - Asn GTT [ENA] ¢þ
>WENV181162618 OEIO01002501 [OEIO] marine metagenome; sea ice 1672 1601 - Asn GTT [ENA] ¢þ
>WENV181309892 OFIY01001916 [OFIY] marine metagenome; sea ice 711 640 - Asn GTT [ENA] ¢þ
>WENV181322421 OFKR01006337 [OFKR] marine metagenome; sea ice 126 197 + Asn GTT [ENA] ¢þ
>WENV181415810 OGCL01027351 [OGCL] hot springs metagenome; Hot spring water 976 1047 + Asn GTT [ENA] ¢þ
>WENV183614985 OOEA01024951 [OOEA] marine metagenome; sea ice 295 224 - Asn GTT [ENA] ¢þ
>WENV183615967 OOEC01011728 [OOEC] marine metagenome; sea ice 773 844 + Asn GTT [ENA] ¢þ
>WENV183616804 OOEE01001486 [OOEE] marine metagenome; sea ice 2548 2619 + Asn GTT [ENA] ¢þ
>WENV183617881 OOEG01180598 [OOEG] marine metagenome; sea ice 127 198 + Asn GTT [ENA] ¢þ
>WENV183621504 OOFU01003460 [OOFU] marine metagenome; sea ice 1147 1076 - Asn GTT [ENA] ¢þ
>WENV183622640 OOFW01000615 [OOFW] marine metagenome; sea ice 1170 1241 + Asn GTT [ENA] ¢þ
>WENV183622721 OOFW01002929 [OOFW] marine metagenome; sea ice 2228 2157 - Asn GTT [ENA] ¢þ
>WENV183623007 OOFX01001733 [OOFX] marine metagenome; sea ice 143 214 + Asn GTT [ENA] ¢þ
>WENV183623356 OOFY01000090 [OOFY] marine metagenome; sea ice 100 171 + Asn GTT [ENA] ¢þ
>WENV183624329 OOGD01001179 [OOGD] marine metagenome; sea ice 4098 4027 - Asn GTT [ENA] ¢þ
>WENV183624806 OOGE01012637 [OOGE] marine metagenome; sea ice 882 811 - Asn GTT [ENA] ¢þ
>WENV183627786 OOGL01046061 [OOGL] marine metagenome; sea ice 649 578 - Asn GTT [ENA] ¢þ
>WENV183628005 OOGM01001383 [OOGM] marine metagenome; sea ice 129 200 + Asn GTT [ENA] ¢þ
>WENV183628240 OOGN01000454 [OOGN] marine metagenome; sea ice 2235 2306 + Asn GTT [ENA] ¢þ
>WENV183628339 OOGN01011333 [OOGN] marine metagenome; sea ice 65 136 + Asn GTT [ENA] ¢þ
>WENV183628723 OOGO01012160 [OOGO] marine metagenome; sea ice 939 868 - Asn GTT [ENA] ¢þ
>WENV183630880 OOGU01006483 [OOGU] marine metagenome; sea ice 147 218 + Asn GTT [ENA] ¢þ
>WENV170305488 CESI01149756 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 528 599 + Asn GTT [ENA] ¢þ
>WENV170327810 CESU01106418 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2589 2660 + Asn GTT [ENA] ¢þ
>WENV170634356 FYBJ01000335 [FYBJ] marine metagenome; marine 1030 958 - Asn GTT [ENA] ¢þ
>WENV170639227 JFJP01001702 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 28890 28819 - Asn GTT [ENA] ¢þ
>WENV170647473 JQIA01029953 [JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead 509 582 + Asn GTT [ENA] ¢þ
>WENV170785508 MDSP01088220 [MDSP] gut metagenome; Stomach gut content 226 155 - Asn GTT [ENA] ¢þ
>WENV170823081 MDSY01051326 [MDSY] marine metagenome; seawater 2302 2373 + Asn GTT [ENA] ¢þ
>WENV170825889 MDSY01101733 [MDSY] marine metagenome; seawater 7879 7808 - Asn GTT [ENA] ¢þ
>CHL1810000607 AP014625 Stramenopiles Triparma laevis (AP014625) 113142 113213 + Asn GTT [ENA] ¡û
>CHL1810002036 FM957154 Stramenopiles Fucus vesiculosus (FM957154) 99743 99670 - Asn GTT [ENA] ¡û
>CHL1810002579 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 98863 98937 + Asn GTT [ENA] ¡û
>CHL1810008219 KC464603 Rhodophyta Pyropia haitanensis (KC464603) 160780 160709 - Asn GTT [ENA] ¡û
>CHL1810008310 KC509521 Stramenopiles Coscinodiscus radiatus ccmp310 (KC509521) 107681 107610 - Asn GTT [ENA] ¡û
>CHL1810008334 KC509522 Stramenopiles Cylindrotheca closterium ccmp1855 (KC509522) 121522 121593 + Asn GTT [ENA] ¡û
>CHL1810008390 KC509524 Stramenopiles Leptocylindrus danicus ccmp1856 (KC509524) 104231 104160 - Asn GTT [ENA] ¡û
>CHL1810014691 KM462866 Viridiplantae Pseudochlorella signiensis (KM462866) 206049 205975 - Asn GTT [ENA] ¡û
>CHL1810014752 KM462868 Viridiplantae Koliella longiseta (KM462868) 185628 185699 + Asn GTT [ENA] ¡û
>CHL1810018137 KP881334 Stramenopiles Sargassum horneri (KP881334) 98987 98916 - Asn GTT [ENA] ¡û
>CHL1810019297 KR709240 Stramenopiles Pseudo-nitzschia multiseries (KR709240) 13215 13144 - Asn GTT [ENA] ¡û
>CHL1810042843 KY433579 Stramenopiles Dictyopteris divaricata (KY433579) 117069 117142 + Asn GTT [ENA] ¡û
>CHL1810049065 LT174527 Viridiplantae Verdigellas peltata (LT174527) 15228 15299 + Asn GTT [ENA] ¡û
>CHL1810059332 MG755796 Stramenopiles Guinardia striata (MG755796) 73355 73426 + Asn GTT [ENA] ¡û
>CHL1810059372 MG755798 Stramenopiles Attheya longicornis (MG755798) 75928 75857 - Asn GTT [ENA] ¡û
>CHL1810059467 MG755802 Stramenopiles Rhizosolenia fallax (MG755802) 72215 72286 + Asn GTT [ENA] ¡û
>CHL1810059474 MG755802 Stramenopiles Rhizosolenia fallax (MG755802) 112234 112163 - Asn GTT [ENA] ¡û
>CHL1810059561 MG755805 Stramenopiles Biddulphia biddulphiana (MG755805) 101578 101507 - Asn GTT [ENA] ¡û
>CHL1810059588 MG755806 Stramenopiles Biddulphia tridens (MG755806) 104427 104356 - Asn GTT [ENA] ¡û
>CHL090100877 AP006715 Rhodophyta Porphyra yezoensis 158617 158546 - Asn GTT [ENA] ¡û
>CHL090102731 EF067920 stramenopiles Phaeodactylum tricornutum 109213 109284 + Asn GTT [ENA] ¡û
>CHL090102765 EF067921 stramenopiles Thalassiosira pseudonana 110046 109973 - Asn GTT [ENA] ¡û
>CHL090103170 U38804 Rhodophyta Porphyra purpurea 157697 157626 - Asn GTT [ENA] ¡û
Identical group No.662109 (32 seq.)
>WENV180104162 OAPB01101581 [OAPB] marine metagenome; Sterile flask 186 115 - Asn GTT [ENA] ¢þ
>WENV180109105 OAPJ01007450 [OAPJ] marine metagenome; ENVO 00002150 637 566 - Asn GTT [ENA] ¢þ
>WENV180113556 OAPR01000098 [OAPR] marine metagenome; seawater 3678 3607 - Asn GTT [ENA] ¢þ
>WENV180367088 OBOE01009372 [OBOE] marine metagenome; ENVO:00002010 437 364 - Asn GTT [ENA] ¢þ
>WENV180368050 OBOF01020083 [OBOF] marine metagenome; ENVO:00002010 239 310 + Asn GTT [ENA] ¢þ
>WENV180375367 OBOL01004788 [OBOL] marine metagenome; Surface water 395 466 + Asn GTT [ENA] ¢þ
>WENV180383464 OBOU01100599 [OBOU] marine metagenome; ENV:00002010 362 291 - Asn GTT [ENA] ¢þ
>WENV180595746 OCPF01023460 [OCPF] marine metagenome; ENVO.00002150 136 207 + Asn GTT [ENA] ¢þ
>WENV183620504 OOFS01000257 [OOFS] marine metagenome; sea ice 593 664 + Asn GTT [ENA] ¢þ
>WENV183621822 OOFV01000001 [OOFV] marine metagenome; seawater 574 645 + Asn GTT [ENA] ¢þ
>WENV170306249 CESJ01016178 [CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 797 872 + Asn GTT [ENA] ¢þ
>WENV170307137 CESJ01123885 [CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 308 379 + Asn GTT [ENA] ¢þ
>WENV170505876 CEVW01112335 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 307 236 - Asn GTT [ENA] ¢þ
>WENV170533883 CEWO01171506 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1503 1432 - Asn GTT [ENA] ¢þ
>WENV170568872 FLMP01089672 [FLMP] seawater metagenome; seawater 59 130 + Asn GTT [ENA] ¢þ
>WENV170570269 FLMP01493152 [FLMP] seawater metagenome; seawater 75 4 - Asn GTT [ENA] ¢þ
>WENV170809197 MDSW01127939 [MDSW] marine metagenome; seawater 6089 6018 - Asn GTT [ENA] ¢þ
>CHL1810000737 AP017927 Viridiplantae Palmophyllum crassum (AP017927) 15153 15224 + Asn GTT [ENA] ¡û
>CHL1810002147 FP102296 Stramenopiles Ectocarpus siliculosus (FP102296) 8616 8688 + Asn GTT [ENA] ¡û
>CHL1810005433 JQ405663 Stramenopiles Saccharina japonica (JQ405663) 120563 120635 + Asn GTT [ENA] ¡û
>CHL1810008367 KC509523 Stramenopiles Didymosphenia geminata BCC011 (KC509523) 71862 71791 - Asn GTT [ENA] ¡û
>CHL1810008418 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 99119 99048 - Asn GTT [ENA] ¡û
>CHL1810008576 KC573041 Haptophyceae Pavlova lutheri ATCC 50092 (KC573041) 72651 72579 - Asn GTT [ENA] ¡û
>CHL1810013627 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 98055 97984 - Asn GTT [ENA] ¡û
>CHL1810013710 KJ958484 Stramenopiles Cerataulina daemon (KJ958484) 111109 111038 - Asn GTT [ENA] ¡û
>CHL1810017334 KP298002 Stramenopiles Undaria pinnatifida (KP298002) 120522 120594 + Asn GTT [ENA] ¡û
>CHL1810019013 KR336545 Stramenopiles Costaria costata (KR336545) 120233 120305 + Asn GTT [ENA] ¡û
>CHL1810024307 KU164871 Stramenopiles Pleurocladia lacustris Sa2 (KU164871) 130732 130660 - Asn GTT [ENA] ¡û
>CHL1810059288 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 72924 72853 - Asn GTT [ENA] ¡û
>CHL1810059311 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 125917 125846 - Asn GTT [ENA] ¡û
>CHL1810059393 MG755799 Stramenopiles Actinocyclus subtilis (MG755799) 106246 106175 - Asn GTT [ENA] ¡û
>CHL090103353 Z67753 stramenopiles Odontella sinensis 9852 9923 + Asn GTT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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