tRNA genes clustered and arranged according to each identical group

stramenopiles

Anticodon = TGC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.467170 (96 seq.)
>WENV180100606 OAOS01000096 [OAOS] marine metagenome; ENVO.00002110 1717 1790 + Ala TGC [ENA] ¢þ
>WENV180102293 OAOY01004037 [OAOY] marine metagenome; Water 592 665 + Ala TGC [ENA] ¢þ
>WENV180103687 OAPB01000189 [OAPB] marine metagenome; Sterile flask 595 522 - Ala TGC [ENA] ¢þ
>WENV180106691 OAPF01000324 [OAPF] marine metagenome; ENVO:00002010 959 887 - Ala TGC [ENA] ¢þ
>WENV180108807 OAPI01000852 [OAPI] marine metagenome; ENVO.00002150 252 179 - Ala TGC [ENA] ¢þ
>WENV180113642 OAPR01004022 [OAPR] marine metagenome; seawater 949 876 - Ala TGC [ENA] ¢þ
>WENV180212194 OBAN01000167 [OBAN] marine metagenome; ENVO 00002150 1172 1099 - Ala TGC [ENA] ¢þ
>WENV180294448 OBIY01155184 [OBIY] beach sand metagenome; beach sand 141 69 - Ala TGC [ENA] ¢þ
>WENV180356614 OBNL01000748 [OBNL] marine metagenome; ENVO:00002010 2092 2019 - Ala TGC [ENA] ¢þ
>WENV180357288 OBNN01000905 [OBNN] marine metagenome; Coastal water 2098 2026 - Ala TGC [ENA] ¢þ
>WENV180359490 OBNS01000091 [OBNS] marine metagenome; Seawater 1733 1806 + Ala TGC [ENA] ¢þ
>WENV180362656 OBNX01015626 [OBNX] marine metagenome; ENVO:00002010 207 280 + Ala TGC [ENA] ¢þ
>WENV180363153 OBNY01002650 [OBNY] marine metagenome; ENVO:00002010 834 761 - Ala TGC [ENA] ¢þ
>WENV180365150 OBOB01020207 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 77 150 + Ala TGC [ENA] ¢þ
>WENV180365539 OBOC01001217 [OBOC] marine metagenome; ocean water 861 788 - Ala TGC [ENA] ¢þ
>WENV180367065 OBOE01007926 [OBOE] marine metagenome; ENVO:00002010 185 113 - Ala TGC [ENA] ¢þ
>WENV180367695 OBOF01000831 [OBOF] marine metagenome; ENVO:00002010 1654 1726 + Ala TGC [ENA] ¢þ
>WENV180368764 OBOG01000156 [OBOG] marine metagenome; seawater 1932 1860 - Ala TGC [ENA] ¢þ
>WENV180370135 OBOH01033910 [OBOH] marine metagenome; ENVO:00002010 163 91 - Ala TGC [ENA] ¢þ
>WENV180376409 OBOM01006636 [OBOM] marine metagenome; Seawater 609 682 + Ala TGC [ENA] ¢þ
>WENV180379166 OBOP01006408 [OBOP] marine metagenome; water 95 168 + Ala TGC [ENA] ¢þ
>WENV180383182 OBOU01006795 [OBOU] marine metagenome; ENV:00002010 231 304 + Ala TGC [ENA] ¢þ
>WENV180390731 OBPL01014841 [OBPL] marine metagenome; Sterivex filter 533 460 - Ala TGC [ENA] ¢þ
>WENV180391853 OBPN01066387 [OBPN] marine metagenome; seawater 310 382 + Ala TGC [ENA] ¢þ
>WENV180393197 OBPQ01002261 [OBPQ] marine metagenome; polypropylene bottle 1171 1243 + Ala TGC [ENA] ¢þ
>WENV180398553 OBQA01051938 [OBQA] marine metagenome; PVDF and polycarbonate filters 193 266 + Ala TGC [ENA] ¢þ
>WENV180590636 OCOU01000120 [OCOU] marine metagenome; Water 322 250 - Ala TGC [ENA] ¢þ
>WENV180591131 OCOV01000342 [OCOV] marine metagenome; ENVO:01000301 584 512 - Ala TGC [ENA] ¢þ
>WENV180593778 OCOX01192577 [OCOX] marine metagenome; ENVO:00002010 223 150 - Ala TGC [ENA] ¢þ
>WENV180593848 OCOY01000538 [OCOY] marine metagenome; ENVO:00002010 3311 3239 - Ala TGC [ENA] ¢þ
>WENV180595664 OCPF01001514 [OCPF] marine metagenome; ENVO.00002150 75 2 - Ala TGC [ENA] ¢þ
>WENV180636303 OCRF01000428 [OCRF] marine metagenome; niskin bottle 2881 2954 + Ala TGC [ENA] ¢þ
>WENV180639116 OCRI01133633 [OCRI] marine metagenome; Sterile flask 105 178 + Ala TGC [ENA] ¢þ
>WENV181092404 OEBK01000263 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 189 262 + Ala TGC [ENA] ¢þ
>WENV181323210 OFKX01000013 [OFKX] marine metagenome; seawater 3188 3115 - Ala TGC [ENA] ¢þ
>WENV181391294 OFRT01000031 [OFRT] seawater metagenome; seawater 2965 3038 + Ala TGC [ENA] ¢þ
>WENV181392101 OFRW01001281 [OFRW] seawater metagenome; seawater 460 387 - Ala TGC [ENA] ¢þ
>WENV181392580 OFRX01000113 [OFRX] seawater metagenome; seawater 3933 3860 - Ala TGC [ENA] ¢þ
>WENV182541349 OJAT01002704 [OJAT] seawater metagenome; Sea water 1177 1250 + Ala TGC [ENA] ¢þ
>WENV182558039 OJDL01002460 [OJDL] seawater metagenome; Sea water 3623 3550 - Ala TGC [ENA] ¢þ
>WENV182562956 OJEA01016801 [OJEA] seawater metagenome; Sea water 671 598 - Ala TGC [ENA] ¢þ
>WENV182565779 OJEH01045820 [OJEH] seawater metagenome; Sea water 212 285 + Ala TGC [ENA] ¢þ
>WENV182576736 OJFY01003793 [OJFY] seawater metagenome; Sea water 102 175 + Ala TGC [ENA] ¢þ
>WENV183054900 OLGU01017072 [OLGU] seawater metagenome; Sea water 744 671 - Ala TGC [ENA] ¢þ
>WENV183059495 OLHU01009487 [OLHU] seawater metagenome; Sea water 606 679 + Ala TGC [ENA] ¢þ
>WENV183618805 OOFP01000039 [OOFP] marine metagenome; seawater 2965 3038 + Ala TGC [ENA] ¢þ
>WENV183619954 OOFR01000786 [OOFR] marine metagenome; seawater 872 945 + Ala TGC [ENA] ¢þ
>WENV183621838 OOFV01000048 [OOFV] marine metagenome; seawater 7980 7907 - Ala TGC [ENA] ¢þ
>WENV183624134 OOGB01037368 [OOGB] marine metagenome; sea ice 29 102 + Ala TGC [ENA] ¢þ
>WENV183625085 OOGF01000437 [OOGF] marine metagenome; seawater 1211 1284 + Ala TGC [ENA] ¢þ
>WENV183626811 OOGK01001329 [OOGK] marine metagenome; seawater 1605 1678 + Ala TGC [ENA] ¢þ
>WENV183628951 OOGP01000105 [OOGP] marine metagenome; seawater 1723 1796 + Ala TGC [ENA] ¢þ
>WENV183630239 OOGS01000213 [OOGS] marine metagenome; seawater 1605 1532 - Ala TGC [ENA] ¢þ
>WENV170023794 BCQL01003802 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 1517 1444 - Ala TGC [ENA] ¢þ
>WENV170271092 CERI01240957 [CERI] marine metagenome genome assembly TARA_067_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 633 558 - Ala TGC [ENA] ¢þ
>WENV170297065 CESE01093064 [CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 537 463 - Ala TGC [ENA] ¢þ
>WENV170504811 CEVW01006549 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 289 364 + Ala TGC [ENA] ¢þ
>WENV170535828 CEWP01110814 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 909 834 - Ala TGC [ENA] ¢þ
>WENV170538778 CEWR01117886 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 562 490 - Ala TGC [ENA] ¢þ
>WENV170567198 FLLY01079614 [FLLY] seawater metagenome; seawater 178 103 - Ala TGC [ENA] ¢þ
>WENV170567567 FLMP01001903 [FLMP] seawater metagenome; seawater 2980 3053 + Ala TGC [ENA] ¢þ
>WENV170568884 FLMP01092168 [FLMP] seawater metagenome; seawater 670 595 - Ala TGC [ENA] ¢þ
>WENV170597781 FUWD010014172 [FUWD] metagenome; unknown 220 295 + Ala TGC [ENA] ¢þ
>WENV170615250 FUWD012852612 [FUWD] metagenome; unknown 148 73 - Ala TGC [ENA] ¢þ
>WENV170615252 FUWD012852639 [FUWD] metagenome; unknown 309 381 + Ala TGC [ENA] ¢þ
>WENV170634379 FYBJ01000767 [FYBJ] marine metagenome; marine 3549 3621 + Ala TGC [ENA] ¢þ
>CHL1810000606 AP014625 Stramenopiles Triparma laevis (AP014625) 105390 105463 + Ala TGC [ENA] ¡û
>CHL1810000619 AP014625 Stramenopiles Triparma laevis (AP014625) 10207 10134 - Ala TGC [ENA] ¡û
>CHL1810002575 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 73971 74043 + Ala TGC [ENA] ¡û
>CHL1810002584 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 138118 138046 - Ala TGC [ENA] ¡û
>CHL1810008383 KC509524 Stramenopiles Leptocylindrus danicus ccmp1856 (KC509524) 71114 71187 + Ala TGC [ENA] ¡û
>CHL1810008389 KC509524 Stramenopiles Leptocylindrus danicus ccmp1856 (KC509524) 120824 120751 - Ala TGC [ENA] ¡û
>CHL1810008413 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 69069 69142 + Ala TGC [ENA] ¡û
>CHL1810008417 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 114678 114605 - Ala TGC [ENA] ¡û
>CHL1810013622 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 65946 66019 + Ala TGC [ENA] ¡û
>CHL1810013625 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 112650 112577 - Ala TGC [ENA] ¡û
>CHL1810013647 KJ958482 Stramenopiles Rhizosolenia imbricata (KJ958482) 65245 65318 + Ala TGC [ENA] ¡û
>CHL1810013653 KJ958482 Stramenopiles Rhizosolenia imbricata (KJ958482) 116956 116883 - Ala TGC [ENA] ¡û
>CHL1810013682 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 67652 67726 + Ala TGC [ENA] ¡û
>CHL1810013686 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 123607 123533 - Ala TGC [ENA] ¡û
>CHL1810013737 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 67906 67978 + Ala TGC [ENA] ¡û
>CHL1810013741 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 124251 124179 - Ala TGC [ENA] ¡û
>CHL1810059279 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 65325 65399 + Ala TGC [ENA] ¡û
>CHL1810059285 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 114228 114154 - Ala TGC [ENA] ¡û
>CHL1810059306 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 79111 79184 + Ala TGC [ENA] ¡û
>CHL1810059310 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 134237 134164 - Ala TGC [ENA] ¡û
>CHL1810059440 MG755801 Stramenopiles Triceratium dubium (MG755801) 69440 69513 + Ala TGC [ENA] ¡û
>CHL1810059444 MG755801 Stramenopiles Triceratium dubium (MG755801) 116175 116102 - Ala TGC [ENA] ¡û
>CHL1810059466 MG755802 Stramenopiles Rhizosolenia fallax (MG755802) 65698 65771 + Ala TGC [ENA] ¡û
>CHL1810059473 MG755802 Stramenopiles Rhizosolenia fallax (MG755802) 118751 118678 - Ala TGC [ENA] ¡û
>CHL1810059583 MG755806 Stramenopiles Biddulphia tridens (MG755806) 72411 72484 + Ala TGC [ENA] ¡û
>CHL1810059586 MG755806 Stramenopiles Biddulphia tridens (MG755806) 120863 120790 - Ala TGC [ENA] ¡û
>CHL090102759 EF067921 stramenopiles Thalassiosira pseudonana 68628 68700 + Ala TGC [ENA] ¡û
>CHL090102763 EF067921 stramenopiles Thalassiosira pseudonana 125437 125365 - Ala TGC [ENA] ¡û
>CHL090103352 Z67753 stramenopiles Odontella sinensis 3838 3911 + Ala TGC [ENA] ¡û
>CHL090103375 Z67753 stramenopiles Odontella sinensis 50521 50448 - Ala TGC [ENA] ¡û
Identical group No.467517 (54 seq.)
>WENV180047684 MPLT02253983 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 401 328 - Ala TGC [ENA] ¢þ
>WENV180111821 OAPO01002162 [OAPO] marine metagenome; ENVO:00002010 571 644 + Ala TGC [ENA] ¢þ
>WENV180357997 OBNO01043135 [OBNO] marine metagenome; ENVO 00002150 237 164 - Ala TGC [ENA] ¢þ
>WENV180381421 OBOR01289905 [OBOR] marine metagenome; ENVO 00002227 348 276 - Ala TGC [ENA] ¢þ
>WENV180383852 OBOV01044189 [OBOV] marine metagenome; ENV:00002010 47 120 + Ala TGC [ENA] ¢þ
>WENV180391996 OBPO01000805 [OBPO] marine metagenome; seawater 2573 2500 - Ala TGC [ENA] ¢þ
>WENV180395306 OBPT01007516 [OBPT] marine metagenome; ENVO:00002010 seawater 72 145 + Ala TGC [ENA] ¢þ
>WENV180398948 OBQE01000882 [OBQE] marine metagenome; ENVO.00002150 454 381 - Ala TGC [ENA] ¢þ
>WENV180585088 OCOK01002093 [OCOK] marine metagenome; ENVO:00002010 340 267 - Ala TGC [ENA] ¢þ
>WENV180587675 OCOO01026710 [OCOO] marine metagenome; seawater 302 229 - Ala TGC [ENA] ¢þ
>WENV180589170 OCOR01003992 [OCOR] marine metagenome; ENVO:00002042 130 57 - Ala TGC [ENA] ¢þ
>WENV180650340 OCSY01010252 [OCSY] marine metagenome; 30 L Plastic container 194 267 + Ala TGC [ENA] ¢þ
>WENV181321425 OFKM01000145 [OFKM] marine metagenome; sea ice 2965 2892 - Ala TGC [ENA] ¢þ
>WENV181322002 OFKP01000081 [OFKP] marine metagenome; sea ice 1817 1890 + Ala TGC [ENA] ¢þ
>WENV181323033 OFKW01000546 [OFKW] marine metagenome; sea ice 2285 2212 - Ala TGC [ENA] ¢þ
>WENV181323460 OFKY01000162 [OFKY] marine metagenome; sea ice 48 121 + Ala TGC [ENA] ¢þ
>WENV181323702 OFKZ01000090 [OFKZ] marine metagenome; sea ice 3775 3702 - Ala TGC [ENA] ¢þ
>WENV181324706 OFLH01000088 [OFLH] marine metagenome; sea ice 1701 1774 + Ala TGC [ENA] ¢þ
>WENV181325146 OFLI01010163 [OFLI] seawater metagenome; seawater 782 709 - Ala TGC [ENA] ¢þ
>WENV182566334 OJEK01000944 [OJEK] seawater metagenome; Sea water 1554 1481 - Ala TGC [ENA] ¢þ
>WENV182592045 OJIP01014711 [OJIP] seawater metagenome; Sea water 104 177 + Ala TGC [ENA] ¢þ
>WENV183053980 OLGR01003823 [OLGR] seawater metagenome; Sea water 600 673 + Ala TGC [ENA] ¢þ
>WENV183055515 OLHD01000208 [OLHD] seawater metagenome; Sea water 2586 2513 - Ala TGC [ENA] ¢þ
>WENV183059918 OLHW01000389 [OLHW] seawater metagenome; Sea water 3594 3521 - Ala TGC [ENA] ¢þ
>WENV183615258 OOEB01000060 [OOEB] marine metagenome; sea ice 2210 2283 + Ala TGC [ENA] ¢þ
>WENV183618628 OOFO01012635 [OOFO] marine metagenome; seawater 723 650 - Ala TGC [ENA] ¢þ
>WENV183620344 OOFR01036841 [OOFR] marine metagenome; seawater 592 519 - Ala TGC [ENA] ¢þ
>WENV183620997 OOFT01001921 [OOFT] marine metagenome; sea ice 1478 1405 - Ala TGC [ENA] ¢þ
>WENV183625542 OOGG01000189 [OOGG] marine metagenome; sea ice 1676 1749 + Ala TGC [ENA] ¢þ
>WENV183626578 OOGJ01000360 [OOGJ] marine metagenome; seawater 394 321 - Ala TGC [ENA] ¢þ
>WENV183627307 OOGL01000097 [OOGL] marine metagenome; sea ice 4158 4085 - Ala TGC [ENA] ¢þ
>WENV183628193 OOGM01044793 [OOGM] marine metagenome; sea ice 526 453 - Ala TGC [ENA] ¢þ
>WENV183628477 OOGN01066026 [OOGN] marine metagenome; sea ice 231 304 + Ala TGC [ENA] ¢þ
>WENV170597779 FUWD010014144 [FUWD] metagenome; unknown 521 594 + Ala TGC [ENA] ¢þ
>WENV170615248 FUWD012852611 [FUWD] metagenome; unknown 724 651 - Ala TGC [ENA] ¢þ
>WENV170619524 FUWD013015675 [FUWD] metagenome; unknown 223 296 + Ala TGC [ENA] ¢þ
>WENV170627629 FUWD013234341 [FUWD] metagenome; unknown 223 296 + Ala TGC [ENA] ¢þ
>CHL1810002663 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 74094 74167 + Ala TGC [ENA] ¡û
>CHL1810002668 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 138204 138131 - Ala TGC [ENA] ¡û
>CHL1810008331 KC509522 Stramenopiles Cylindrotheca closterium ccmp1855 (KC509522) 93176 93249 + Ala TGC [ENA] ¡û
>CHL1810008337 KC509522 Stramenopiles Cylindrotheca closterium ccmp1855 (KC509522) 154890 154817 - Ala TGC [ENA] ¡û
>CHL1810019294 KR709240 Stramenopiles Pseudo-nitzschia multiseries (KR709240) 42874 42801 - Ala TGC [ENA] ¡û
>CHL1810059338 MG755796 Stramenopiles Guinardia striata (MG755796) 115313 115240 - Ala TGC [ENA] ¡û
>CHL1810059343 MG755796 Stramenopiles Guinardia striata (MG755796) 64661 64588 - Ala TGC [ENA] ¡û
>CHL1810059363 MG755798 Stramenopiles Attheya longicornis (MG755798) 70788 70861 + Ala TGC [ENA] ¡û
>CHL1810059366 MG755798 Stramenopiles Attheya longicornis (MG755798) 124068 123995 - Ala TGC [ENA] ¡û
>CHL1810059415 MG755800 Stramenopiles Entomoneis sp. (MG755800) 118495 118568 + Ala TGC [ENA] ¡û
>CHL1810059423 MG755800 Stramenopiles Entomoneis sp. (MG755800) 67676 67603 - Ala TGC [ENA] ¡û
>CHL1810059499 MG755803 Stramenopiles Psammoneis obaidii (MG755803) 87813 87886 + Ala TGC [ENA] ¡û
>CHL1810059504 MG755803 Stramenopiles Psammoneis obaidii (MG755803) 155021 154948 - Ala TGC [ENA] ¡û
>CHL1810059556 MG755805 Stramenopiles Biddulphia biddulphiana (MG755805) 68552 68625 + Ala TGC [ENA] ¡û
>CHL1810059559 MG755805 Stramenopiles Biddulphia biddulphiana (MG755805) 117189 117116 - Ala TGC [ENA] ¡û
>CHL090102729 EF067920 stramenopiles Phaeodactylum tricornutum 66899 66972 + Ala TGC [ENA] ¡û
>CHL090102734 EF067920 stramenopiles Phaeodactylum tricornutum 114145 114072 - Ala TGC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK