tRNA genes clustered and arranged according to each identical group

stramenopiles

Anticodon = TGG

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.318999 (37 seq.)
>WENV180082126 MPMC02187665 [MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter 101 176 + Pro TGG [ENA] ¢þ
>WENV180110921 OAPN01013748 [OAPN] marine metagenome; 2011 440 513 + Pro TGG [ENA] ¢þ
>WENV180209326 OBAK01071157 [OBAK] marine metagenome; ENVO.00002150 137 64 - Pro TGG [ENA] ¢þ
>WENV180357381 OBNN01006024 [OBNN] marine metagenome; Coastal water 58 131 + Pro TGG [ENA] ¢þ
>WENV180359223 OBNR01019340 [OBNR] marine metagenome; Seawater_00002010_00002149 328 255 - Pro TGG [ENA] ¢þ
>WENV180365431 OBOB01136145 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 281 354 + Pro TGG [ENA] ¢þ
>WENV180367014 OBOE01003878 [OBOE] marine metagenome; ENVO:00002010 1166 1093 - Pro TGG [ENA] ¢þ
>WENV180368724 OBOF01216209 [OBOF] marine metagenome; ENVO:00002010 125 198 + Pro TGG [ENA] ¢þ
>WENV180368870 OBOG01003631 [OBOG] marine metagenome; seawater 148 75 - Pro TGG [ENA] ¢þ
>WENV180370513 OBOH01117494 [OBOH] marine metagenome; ENVO:00002010 169 96 - Pro TGG [ENA] ¢þ
>WENV180374664 OBOK01005052 [OBOK] marine metagenome; seawater 847 774 - Pro TGG [ENA] ¢þ
>WENV180591032 OCOU01071489 [OCOU] marine metagenome; Water 94 19 - Pro TGG [ENA] ¢þ
>WENV180591379 OCOV01016390 [OCOV] marine metagenome; ENVO:01000301 596 523 - Pro TGG [ENA] ¢þ
>WENV180595794 OCPF01041319 [OCPF] marine metagenome; ENVO.00002150 141 214 + Pro TGG [ENA] ¢þ
>WENV180636723 OCRF01046958 [OCRF] marine metagenome; niskin bottle 324 251 - Pro TGG [ENA] ¢þ
>WENV181367156 OFPV01000877 [OFPV] freshwater metagenome; Freshwater Lake 276 349 + Pro TGG [ENA] ¢þ
>WENV181370262 OFQS01001377 [OFQS] freshwater metagenome; Freshwater Lake 2549 2476 - Pro TGG [ENA] ¢þ
>WENV181392949 OFRX01021876 [OFRX] seawater metagenome; seawater 567 494 - Pro TGG [ENA] ¢þ
>WENV183629320 OOGP01022141 [OOGP] marine metagenome; seawater 567 494 - Pro TGG [ENA] ¢þ
>WENV183630415 OOGS01011526 [OOGS] marine metagenome; seawater 535 462 - Pro TGG [ENA] ¢þ
>WENV183793215 PQDT01050420 [PQDT] marine sediment metagenome; marine sediment 334 407 + Pro TGG [ENA] ¢þ
>WENV170271240 CERI01279356 [CERI] marine metagenome genome assembly TARA_067_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1691 1618 - Pro TGG [ENA] ¢þ
>WENV170275948 CERM01237846 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1155 1082 - Pro TGG [ENA] ¢þ
>WENV170537092 CEWP01347773 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 11711 11638 - Pro TGG [ENA] ¢þ
>WENV170568458 FLMP01041472 [FLMP] seawater metagenome; seawater 1100 1027 - Pro TGG [ENA] ¢þ
>WENV170608979 FUWD011194512 [FUWD] metagenome; unknown 191 264 + Pro TGG [ENA] ¢þ
>WENV170816825 MDSX01038169 [MDSX] marine metagenome; seawater 7013 6940 - Pro TGG [ENA] ¢þ
>CHL1810002582 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 141629 141702 + Pro TGG [ENA] ¡û
>CHL1810002588 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 70460 70387 - Pro TGG [ENA] ¡û
>CHL1810013684 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 126718 126791 + Pro TGG [ENA] ¡û
>CHL1810013693 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 64541 64468 - Pro TGG [ENA] ¡û
>CHL1810013739 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 127458 127531 + Pro TGG [ENA] ¡û
>CHL1810013748 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 64699 64626 - Pro TGG [ENA] ¡û
>CHL1810059531 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 129075 129148 + Pro TGG [ENA] ¡û
>CHL1810059540 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 64921 64848 - Pro TGG [ENA] ¡û
>CHL090102761 EF067921 stramenopiles Thalassiosira pseudonana 128661 128735 + Pro TGG [ENA] ¡û
>CHL090102770 EF067921 stramenopiles Thalassiosira pseudonana 65404 65330 - Pro TGG [ENA] ¡û
Identical group No.353727 (11 seq.)
>WENV180108812 OAPI01001560 [OAPI] marine metagenome; ENVO.00002150 482 409 - Pro TGG [ENA] ¢þ
>WENV180363592 OBNY01124138 [OBNY] marine metagenome; ENVO:00002010 303 376 + Pro TGG [ENA] ¢þ
>WENV180368134 OBOF01027659 [OBOF] marine metagenome; ENVO:00002010 57 131 + Pro TGG [ENA] ¢þ
>WENV180637740 OCRG01105936 [OCRG] marine metagenome; seawater 100 173 + Pro TGG [ENA] ¢þ
>WENV183620258 OOFR01018965 [OOFR] marine metagenome; seawater 538 612 + Pro TGG [ENA] ¢þ
>CHL1810008304 KC509521 Stramenopiles Coscinodiscus radiatus ccmp310 (KC509521) 64271 64346 + Pro TGG [ENA] ¡û
>CHL1810008307 KC509521 Stramenopiles Coscinodiscus radiatus ccmp310 (KC509521) 118345 118270 - Pro TGG [ENA] ¡û
>CHL1810008415 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 121843 121918 + Pro TGG [ENA] ¡û
>CHL1810008423 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 61904 61829 - Pro TGG [ENA] ¡û
>CHL090103350 Z67753 stramenopiles Odontella sinensis 267 341 + Pro TGG [ENA] ¡û
>CHL090103373 Z67753 stramenopiles Odontella sinensis 54092 54018 - Pro TGG [ENA] ¡û
Identical group No.421698 (4 seq.)
>CHL1810002635 GU591327 Alveolata Durinskia baltica CS-38 (GU591327) 62666 62741 + Pro TGG [ENA] ¡û
>CHL1810002642 GU591327 Alveolata Durinskia baltica CS-38 (GU591327) 116328 116253 - Pro TGG [ENA] ¡û
>CHL090102727 EF067920 stramenopiles Phaeodactylum tricornutum 63784 63859 + Pro TGG [ENA] ¡û
>CHL090102732 EF067920 stramenopiles Phaeodactylum tricornutum 117260 117185 - Pro TGG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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