tRNA genes clustered and arranged according to each identical group

stramenopiles

Anticodon = TGT

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.662117 (46 seq.)
>WENV180038601 LLBY010000546 [LLBY] soil metagenome; soil from tomato rhizosphere 56036 55965 - Thr TGT [ENA] ¢þ
>WENV180111079 OAPN01027033 [OAPN] marine metagenome; 2011 404 477 + Thr TGT [ENA] ¢þ
>WENV180367703 OBOF01001320 [OBOF] marine metagenome; ENVO:00002010 1509 1582 + Thr TGT [ENA] ¢þ
>WENV180368883 OBOG01004226 [OBOG] marine metagenome; seawater 328 401 + Thr TGT [ENA] ¢þ
>WENV180375450 OBOL01011963 [OBOL] marine metagenome; Surface water 439 368 - Thr TGT [ENA] ¢þ
>WENV180588355 OCOP01035058 [OCOP] marine metagenome; water 329 258 - Thr TGT [ENA] ¢þ
>WENV180591200 OCOV01003377 [OCOV] marine metagenome; ENVO:01000301 682 755 + Thr TGT [ENA] ¢þ
>WENV180594089 OCOY01033585 [OCOY] marine metagenome; ENVO:00002010 301 228 - Thr TGT [ENA] ¢þ
>WENV181162818 OEIO01018292 [OEIO] marine metagenome; sea ice 246 317 + Thr TGT [ENA] ¢þ
>WENV181309910 OFIY01006090 [OFIY] marine metagenome; sea ice 607 536 - Thr TGT [ENA] ¢þ
>WENV181324330 OFLD01021068 [OFLD] marine metagenome; sea ice 273 202 - Thr TGT [ENA] ¢þ
>WENV181324871 OFLH01022503 [OFLH] marine metagenome; sea ice 336 407 + Thr TGT [ENA] ¢þ
>WENV181325884 OFLJ01042554 [OFLJ] seawater metagenome; seawater 354 425 + Thr TGT [ENA] ¢þ
>WENV181392786 OFRX01005533 [OFRX] seawater metagenome; seawater 287 214 - Thr TGT [ENA] ¢þ
>WENV183615312 OOEB01002227 [OOEB] marine metagenome; sea ice 450 521 + Thr TGT [ENA] ¢þ
>WENV183615889 OOEC01000835 [OOEC] marine metagenome; sea ice 3307 3378 + Thr TGT [ENA] ¢þ
>WENV183615923 OOEC01005551 [OOEC] marine metagenome; sea ice 281 352 + Thr TGT [ENA] ¢þ
>WENV183616737 OOEE01000119 [OOEE] marine metagenome; sea ice 280 351 + Thr TGT [ENA] ¢þ
>WENV183617436 OOEE01291275 [OOEE] marine metagenome; sea ice 11 82 + Thr TGT [ENA] ¢þ
>WENV183617697 OOEG01048730 [OOEG] marine metagenome; sea ice 338 267 - Thr TGT [ENA] ¢þ
>WENV183619750 OOFQ01043846 [OOFQ] marine metagenome; seawater 354 425 + Thr TGT [ENA] ¢þ
>WENV183621097 OOFT01006318 [OOFT] marine metagenome; sea ice 533 606 + Thr TGT [ENA] ¢þ
>WENV183622743 OOFW01004695 [OOFW] marine metagenome; sea ice 93 22 - Thr TGT [ENA] ¢þ
>WENV183624321 OOGD01001103 [OOGD] marine metagenome; sea ice 329 400 + Thr TGT [ENA] ¢þ
>WENV183624965 OOGE01048819 [OOGE] marine metagenome; sea ice 146 217 + Thr TGT [ENA] ¢þ
>WENV183628236 OOGN01000363 [OOGN] marine metagenome; sea ice 4510 4439 - Thr TGT [ENA] ¢þ
>WENV183629234 OOGP01011883 [OOGP] marine metagenome; seawater 287 214 - Thr TGT [ENA] ¢þ
>WENV183631082 OOGU01026982 [OOGU] marine metagenome; sea ice 353 424 + Thr TGT [ENA] ¢þ
>WENV183793266 PQDT01144467 [PQDT] marine sediment metagenome; marine sediment 204 131 - Thr TGT [ENA] ¢þ
>WENV170024575 BCQL01077975 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 106 177 + Thr TGT [ENA] ¢þ
>WENV170622284 FUWD013096067 [FUWD] metagenome; unknown 2071 2144 + Thr TGT [ENA] ¢þ
>WENV170630499 FUWD013310666 [FUWD] metagenome; unknown 2071 2144 + Thr TGT [ENA] ¢þ
>WENV170639253 JFJP01001711 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 4219 4148 - Thr TGT [ENA] ¢þ
>WENV170647069 JQIA01009297 [JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead 324 251 - Thr TGT [ENA] ¢þ
>CHL1810002597 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 968 897 - Thr TGT [ENA] ¡û
>CHL1810002628 GU591327 Alveolata Durinskia baltica CS-38 (GU591327) 16392 16465 + Thr TGT [ENA] ¡û
>CHL1810002655 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 18503 18576 + Thr TGT [ENA] ¡û
>CHL1810005314 JQ088178 Stramenopiles Ulnaria acus (JQ088178) 16105 16032 - Thr TGT [ENA] ¡û
>CHL1810008288 KC509520 Stramenopiles Asterionellopsis glacialis ccmp1717 (KC509520) 13998 13927 - Thr TGT [ENA] ¡û
>CHL1810008341 KC509522 Stramenopiles Cylindrotheca closterium ccmp1855 (KC509522) 55599 55528 - Thr TGT [ENA] ¡û
>CHL1810013612 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 21003 21074 + Thr TGT [ENA] ¡û
>CHL1810013674 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 48561 48635 + Thr TGT [ENA] ¡û
>CHL1810013729 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 48407 48480 + Thr TGT [ENA] ¡û
>CHL1810059373 MG755798 Stramenopiles Attheya longicornis (MG755798) 25618 25547 - Thr TGT [ENA] ¡û
>CHL1810059521 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 48697 48770 + Thr TGT [ENA] ¡û
>CHL090102751 EF067921 stramenopiles Thalassiosira pseudonana 49110 49183 + Thr TGT [ENA] ¡û
Identical group No.667354 (20 seq.)
>WENV181306870 OFIN01011365 [OFIN] marine metagenome; sea ice 64 135 + Thr TGT [ENA] ¢þ
>WENV181322119 OFKP01008125 [OFKP] marine metagenome; sea ice 728 657 - Thr TGT [ENA] ¢þ
>WENV181322872 OFKV01004663 [OFKV] marine metagenome; sea ice 873 802 - Thr TGT [ENA] ¢þ
>WENV183616069 OOEC01047587 [OOEC] marine metagenome; sea ice 319 390 + Thr TGT [ENA] ¢þ
>WENV183616263 OOEC01250991 [OOEC] marine metagenome; sea ice 74 3 - Thr TGT [ENA] ¢þ
>WENV183621138 OOFT01009063 [OOFT] marine metagenome; sea ice 815 744 - Thr TGT [ENA] ¢þ
>WENV183621935 OOFV01000906 [OOFV] marine metagenome; seawater 3635 3562 - Thr TGT [ENA] ¢þ
>WENV183622651 OOFW01000770 [OOFW] marine metagenome; sea ice 2573 2502 - Thr TGT [ENA] ¢þ
>WENV183622977 OOFX01000203 [OOFX] marine metagenome; sea ice 4689 4616 - Thr TGT [ENA] ¢þ
>WENV183623372 OOFY01001454 [OOFY] marine metagenome; sea ice 278 349 + Thr TGT [ENA] ¢þ
>WENV183624426 OOGD01008970 [OOGD] marine metagenome; sea ice 344 415 + Thr TGT [ENA] ¢þ
>WENV170270892 CERI01144489 [CERI] marine metagenome genome assembly TARA_067_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 429 501 + Thr TGT [ENA] ¢þ
>WENV170275853 CERM01223075 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 584 512 - Thr TGT [ENA] ¢þ
>WENV170535823 CEWP01110274 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3095 3023 - Thr TGT [ENA] ¢þ
>WENV170568792 FLMP01079312 [FLMP] seawater metagenome; seawater 428 499 + Thr TGT [ENA] ¢þ
>CHL1810008350 KC509523 Stramenopiles Didymosphenia geminata BCC011 (KC509523) 16692 16765 + Thr TGT [ENA] ¡û
>CHL1810008408 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 47874 47947 + Thr TGT [ENA] ¡û
>CHL1810013721 KJ958484 Stramenopiles Cerataulina daemon (KJ958484) 8840 8767 - Thr TGT [ENA] ¡û
>CHL1810059303 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 64080 64151 + Thr TGT [ENA] ¡û
>CHL090102721 EF067920 stramenopiles Phaeodactylum tricornutum 16589 16660 + Thr TGT [ENA] ¡û
Identical group No.813217 (1 seq.)
>CHL090103361 Z67753 stramenopiles Odontella sinensis 66647 66717 + Thr TGT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK