tRNA genes clustered and arranged according to each identical group

stramenopiles

Anticodon = TTT

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.657788 (22 seq.)
>WENV180107220 OAPF01065878 [OAPF] marine metagenome; ENVO:00002010 132 203 + Lys TTT [ENA] ¢þ
>WENV181323597 OFKY01012593 [OFKY] marine metagenome; sea ice 214 143 - Lys TTT [ENA] ¢þ
>WENV182541096 OJAQ01010811 [OJAQ] seawater metagenome; Sea water 271 342 + Lys TTT [ENA] ¢þ
>WENV182558519 OJDM01010274 [OJDM] seawater metagenome; Sea water 77 148 + Lys TTT [ENA] ¢þ
>WENV182569805 OJFB01000623 [OJFB] seawater metagenome; Sea water 2460 2531 + Lys TTT [ENA] ¢þ
>WENV182574982 OJFS01014650 [OJFS] seawater metagenome; Sea water 836 765 - Lys TTT [ENA] ¢þ
>WENV182583341 OJHD01004626 [OJHD] seawater metagenome; Sea water 233 304 + Lys TTT [ENA] ¢þ
>WENV182592733 OJIR01014698 [OJIR] seawater metagenome; Sea water 121 192 + Lys TTT [ENA] ¢þ
>WENV183057900 OLHM01019627 [OLHM] seawater metagenome; Sea water 536 465 - Lys TTT [ENA] ¢þ
>WENV183059135 OLHS01007475 [OLHS] seawater metagenome; Sea water 72 145 + Lys TTT [ENA] ¢þ
>WENV183059537 OLHU01017859 [OLHU] seawater metagenome; Sea water 56 127 + Lys TTT [ENA] ¢þ
>WENV170235696 CEQL01110167 [CEQL] marine metagenome genome assembly TARA_076_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 23307 23236 - Lys TTT [ENA] ¢þ
>WENV170290566 CESA01027478 [CESA] marine metagenome genome assembly TARA_078_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1170 1099 - Lys TTT [ENA] ¢þ
>WENV170290596 CESA01030563 [CESA] marine metagenome genome assembly TARA_078_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2357 2428 + Lys TTT [ENA] ¢þ
>WENV170292234 CESB01033527 [CESB] marine metagenome genome assembly TARA_078_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5023 4952 - Lys TTT [ENA] ¢þ
>WENV170301008 CESG01234243 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 990 1061 + Lys TTT [ENA] ¢þ
>WENV170823750 MDSY01063088 [MDSY] marine metagenome; seawater 2413 2484 + Lys TTT [ENA] ¢þ
>WENV170824392 MDSY01074936 [MDSY] marine metagenome; seawater 533 462 - Lys TTT [ENA] ¢þ
>WENV170827230 MDSY01125090 [MDSY] marine metagenome; seawater 2696 2767 + Lys TTT [ENA] ¢þ
>CHL1810059405 MG755800 Stramenopiles Entomoneis sp. (MG755800) 12810 12881 + Lys TTT [ENA] ¡û
>CHL090101608 AY741371 Haptophyceae Emiliania huxleyi 84123 84050 - Lys TTT [ENA] ¡û
>CHL090102720 EF067920 stramenopiles Phaeodactylum tricornutum 13008 13079 + Lys TTT [ENA] ¡û
Identical group No.662296 (33 seq.)
>WENV180357284 OBNN01000756 [OBNN] marine metagenome; Coastal water 2670 2599 - Lys TTT [ENA] ¢þ
>WENV180359375 OBNR01058803 [OBNR] marine metagenome; Seawater_00002010_00002149 201 130 - Lys TTT [ENA] ¢þ
>WENV180367254 OBOE01032896 [OBOE] marine metagenome; ENVO:00002010 275 204 - Lys TTT [ENA] ¢þ
>WENV180368760 OBOG01000106 [OBOG] marine metagenome; seawater 3277 3206 - Lys TTT [ENA] ¢þ
>WENV180383917 OBOV01077695 [OBOV] marine metagenome; ENV:00002010 404 333 - Lys TTT [ENA] ¢þ
>WENV180592261 OCOV01247531 [OCOV] marine metagenome; ENVO:01000301 240 169 - Lys TTT [ENA] ¢þ
>WENV181370385 OFQS01007345 [OFQS] freshwater metagenome; Freshwater Lake 1037 966 - Lys TTT [ENA] ¢þ
>WENV183620872 OOFS01070136 [OOFS] marine metagenome; sea ice 1 72 + Lys TTT [ENA] ¢þ
>WENV183621873 OOFV01000267 [OOFV] marine metagenome; seawater 1548 1619 + Lys TTT [ENA] ¢þ
>WENV170274287 CERM01008504 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 419 348 - Lys TTT [ENA] ¢þ
>WENV170536368 CEWP01171334 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 10023 10094 + Lys TTT [ENA] ¢þ
>WENV170627040 FUWD013230872 [FUWD] metagenome; unknown 3942 3871 - Lys TTT [ENA] ¢þ
>WENV170630502 FUWD013310666 [FUWD] metagenome; unknown 7853 7782 - Lys TTT [ENA] ¢þ
>WENV170809356 MDSW01130591 [MDSW] marine metagenome; seawater 2601 2672 + Lys TTT [ENA] ¢þ
>WENV170809394 MDSW01131101 [MDSW] marine metagenome; seawater 2720 2791 + Lys TTT [ENA] ¢þ
>WENV170816449 MDSX01030617 [MDSX] marine metagenome; seawater 2708 2779 + Lys TTT [ENA] ¢þ
>CHL1810002594 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 38859 38788 - Lys TTT [ENA] ¡û
>CHL1810008403 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 12774 12845 + Lys TTT [ENA] ¡û
>CHL1810013634 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 35576 35505 - Lys TTT [ENA] ¡û
>CHL1810013695 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 53842 53771 - Lys TTT [ENA] ¡û
>CHL1810013718 KJ958484 Stramenopiles Cerataulina daemon (KJ958484) 36392 36321 - Lys TTT [ENA] ¡û
>CHL1810013750 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 53873 53802 - Lys TTT [ENA] ¡û
>CHL1810034265 KX619437 Stramenopiles Toxarium undulatum ECT3802 (KX619437) 20177 20248 + Lys TTT [ENA] ¡û
>CHL1810059320 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 37589 37518 - Lys TTT [ENA] ¡û
>CHL1810059345 MG755796 Stramenopiles Guinardia striata (MG755796) 42628 42557 - Lys TTT [ENA] ¡û
>CHL1810059455 MG755801 Stramenopiles Triceratium dubium (MG755801) 32967 32896 - Lys TTT [ENA] ¡û
>CHL1810059542 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 54027 53956 - Lys TTT [ENA] ¡û
>CHL1810059568 MG755805 Stramenopiles Biddulphia biddulphiana (MG755805) 33044 32973 - Lys TTT [ENA] ¡û
>CHL1810059594 MG755806 Stramenopiles Biddulphia tridens (MG755806) 36176 36104 - Lys TTT [ENA] ¡û
>CHL090102772 EF067921 stramenopiles Thalassiosira pseudonana 54502 54431 - Lys TTT [ENA] ¡û
>CHL090103363 Z67753 stramenopiles Odontella sinensis 86730 86801 + Lys TTT [ENA] ¡û
>WENV029910 AACY021240000 Marine microbial communities from Global Ocean Sampling (GOS) 403 477 + Lys TTT [ENA]
>W1610920056 LSSF01000062 Unclassified Thermoplasmatales archaeon SG8-52-4 [LSSF] 1741 1670 - Lys TTT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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