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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
unclassified archaeal dsDNA viruses
Anticodon = TTG
HIT:
5 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.244371 (1 seq.)
>PHG14102131
KC292029
unclassified archaeal dsDNA viruses
Halovirus HCTV-1 Gb1 (KC292029)
28506
28432
-
Gln
TTG
[ENA]
¡û
Identical group No.250611 (1 seq.)
>PHG14102130
KC292027
unclassified archaeal dsDNA viruses
Halovirus HCTV-5 Gb1 (KC292027)
28959
28885
-
Gln
TTG
[ENA]
¡û
Identical group No.266321 (1 seq.)
>PHG14102002
KC117377
unclassified archaeal dsDNA viruses
Halovirus HVTV-1 TN106 (KC117377)
25380
25306
-
Gln
TTG
[ENA]
¡û
Identical group No.452547 (1 seq.)
>PHG14102001
KC117376
unclassified archaeal dsDNA viruses
Halovirus HSTV-2 TN106 (KC117376)
46404
46332
-
Gln
TTG
[ENA]
¡û
Identical group No.628096 (1 seq.)
>PHG14102107
KC292021
unclassified archaeal dsDNA viruses
Halovirus HRTV-7 Gb1 (KC292021)
45885
45813
-
Gln
TTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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